| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963950
Identifier: 157963950
GI number: 157963950
Start: 5029569
End: 5030243
Strand: Reverse
Name: 157963950
Synonym: Spea_4139
Alternate gene names: NA
Gene position: 5030243-5029569 (Counterclockwise)
Preceding gene: 157963951
Following gene: 157963949
Centisome position: 97.21
GC content: 46.52
Gene sequence:
>675_bases ATGACCGAATTAGTAAGAGAAGTTTCAGAAAACGATCAGTTAAGAGCCGATATTTATCAGTTGTTAGCTGCGTTATTACG TCGCCAACCAAGCCCAGAGTTGCTTGCGTTCTTATCGGGCTTAGAAATTGATGCTGACGACGACAGCGACATGACTAAAG CTTGGGTTGGACTTAAATTAGCCGCACAGCAATTTAGCGAAGAACAGCTTGAAGATGAGTATTTCAACGTGTTCCTTGGC GTAGGCTGTGGCGAAATCCTGCCTTACGGCAGCTGGTTTATGACAGGTTCTTTGATGGACAAGCCATTAGCCTTATTACG TAACGACCTAATGCAGTTAGGTTTTGAGCGTGAAGAAGATGTGAAAGAGCCTGAAGATCACGTGGCTGCACTATGTGAAG TAATGGGCACTTTGATTTTAGAAGCTCCAGGTTACCGTCAGCTTGCCTTCTACCAGCGCCACATGGGTAGCTGGATTGAA CGCTTCTGTGACAATTTAGCTAAGGCGCCAAGCGCCGCCTTCTATGCCACAGTCGCTCAATTGGCTAAGGCGTTTTTCGT TATCGAAGCGAGAGAGTTTGAGCAATTGAGTCTAGACATTCCTGTTAACTGCCCTGGCAGTGAAGCGGAAGCGTCAGAAA AGATTGAGCCTGCTACCAACGAGTTAGCGTCTTAA
Upstream 100 bases:
>100_bases AACACAGAGCGTCTAAAGATGTGTGGTGACTGTCGAGTTAAAGACATGTTTGAAGACATTCTTCAAGATCCTGAAAAGCA ACTGCGATAAGAGTTTAACC
Downstream 100 bases:
>100_bases GCGCTATTGGTAGAGGTTTGGATTTATGTCAGTTCAGTGCTCGTAGTTAACTGCTATCGCCTGAGCTGACATAGACAAAA AATGGGATTCTTCTCAACAA
Product: cytoplasmic chaperone TorD family protein
Products: NA
Alternate protein names: Cytoplasmic Chaperone rD; Chaperone rD Family; Chaperone; RD Family Cytoplasmic Chaperone; RA Specific Chaperone; Cytoplasmic Chaperone rD Subfamily; Formate Dehydrogenase-Specific Chaperone; Chaperone Protein rD; Chaperone rD; Chaperone Protein rD Family; Cytoplasmic Chaperone rd Family Protein
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MTELVREVSENDQLRADIYQLLAALLRRQPSPELLAFLSGLEIDADDDSDMTKAWVGLKLAAQQFSEEQLEDEYFNVFLG VGCGEILPYGSWFMTGSLMDKPLALLRNDLMQLGFEREEDVKEPEDHVAALCEVMGTLILEAPGYRQLAFYQRHMGSWIE RFCDNLAKAPSAAFYATVAQLAKAFFVIEAREFEQLSLDIPVNCPGSEAEASEKIEPATNELAS
Sequences:
>Translated_224_residues MTELVREVSENDQLRADIYQLLAALLRRQPSPELLAFLSGLEIDADDDSDMTKAWVGLKLAAQQFSEEQLEDEYFNVFLG VGCGEILPYGSWFMTGSLMDKPLALLRNDLMQLGFEREEDVKEPEDHVAALCEVMGTLILEAPGYRQLAFYQRHMGSWIE RFCDNLAKAPSAAFYATVAQLAKAFFVIEAREFEQLSLDIPVNCPGSEAEASEKIEPATNELAS >Mature_223_residues TELVREVSENDQLRADIYQLLAALLRRQPSPELLAFLSGLEIDADDDSDMTKAWVGLKLAAQQFSEEQLEDEYFNVFLGV GCGEILPYGSWFMTGSLMDKPLALLRNDLMQLGFEREEDVKEPEDHVAALCEVMGTLILEAPGYRQLAFYQRHMGSWIER FCDNLAKAPSAAFYATVAQLAKAFFVIEAREFEQLSLDIPVNCPGSEAEASEKIEPATNELAS
Specific function: Unknown
COG id: COG3381
COG function: function code R; Uncharacterized component of anaerobic dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25082; Mature: 24950
Theoretical pI: Translated: 4.00; Mature: 4.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTELVREVSENDQLRADIYQLLAALLRRQPSPELLAFLSGLEIDADDDSDMTKAWVGLKL CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH AAQQFSEEQLEDEYFNVFLGVGCGEILPYGSWFMTGSLMDKPLALLRNDLMQLGFEREED HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHH VKEPEDHVAALCEVMGTLILEAPGYRQLAFYQRHMGSWIERFCDNLAKAPSAAFYATVAQ CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LAKAFFVIEAREFEQLSLDIPVNCPGSEAEASEKIEPATNELAS HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHCC >Mature Secondary Structure TELVREVSENDQLRADIYQLLAALLRRQPSPELLAFLSGLEIDADDDSDMTKAWVGLKL HHHHHHHHCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH AAQQFSEEQLEDEYFNVFLGVGCGEILPYGSWFMTGSLMDKPLALLRNDLMQLGFEREED HHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHCCHHHHHHHHHHHHHHHHHCCCCHHH VKEPEDHVAALCEVMGTLILEAPGYRQLAFYQRHMGSWIERFCDNLAKAPSAAFYATVAQ CCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH LAKAFFVIEAREFEQLSLDIPVNCPGSEAEASEKIEPATNELAS HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA