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The map label for this gene is fdoI [C]

Identifier: 157963946

GI number: 157963946

Start: 5024654

End: 5025661

Strand: Reverse

Name: fdoI [C]

Synonym: Spea_4135

Alternate gene names: 157963946

Gene position: 5025661-5024654 (Counterclockwise)

Preceding gene: 157963947

Following gene: 157963945

Centisome position: 97.12

GC content: 45.24

Gene sequence:

>1008_bases
ATGTTTATGAAATCACTGCGCAGCCTGTTTGCATTGCTAGTTATTCCATTGATGCTTTCAATGGGGTTGGGACTTAGCGC
TTCGGCAATGGCTGCGGATGATCAAACTAGCCAACAACAAGCTGCAACCAACGACGCCGATCTTTGGCGCGCGGTTAAGG
CGGGTGACTCAGGTTACACCGTGGCAAAAGGCATCGAGACTGGTGTGCTAATCAATGTAATTGGCAACGAAGGCAAAATT
GTTCGCAACGAGTATTTAACCCCTGTGATGGGTATTACAGTTGTTGGCGTATTTGCAGCGTTCCTATTTTTCTACCTAGT
GAATGGTCCCTCTAAATTGAGTAAGGGCTTTTCTGGAAAAATGGTTCTACGTTGGTCTAAAGCAGATTTGTGGATCCACT
GGGTATTAGCGACATCTTGTTTGGCGCTGATATTCACAGGACTCAATATCATGCTGGGCAAACACGTATTGCAACCCTAT
GTTGGCGAGGGTCTATGGGCCGGGCTGATTTATGGTAGCAAGACCATACATGATTGGGTTGGGCCGATATTTATCGTGTC
TTGGATCTTGTGTGTTGTGAAGTGGATGCCGATGCAAACCTTCAAGATGTATGACTTAAAGTGGTTTTTAGTGGTTGGTG
GTTACATCAACTTTGGACCATTTAAAGGTAAGCATCCTGATAGTGGATTTGCTAACGCCGGTGAGAAAATGTGGTTCTGG
ACGTTAACCTTATTCGGCCTTTTTATTGCCGCATCAGGGTTAATGCTGGTATTGCCGGGCCTAGATCTGCCACGTGAAGC
CTCTATGGCCGCGCTGTTAATCCATTCCATAAGCGCGATTATCATTATTGCATTTACTATCGTCCATATTTGGATGGCAA
CGGTATTAAGTGAAGGTGGTATGGAGTGTATGGTGTCGGGTTATTGTGATGAGAACTGGGCTGTCCAGCATCACAACCTT
TGGTACGACGAACTGAAAGATAGCAATAGCATAGTTTATAAAGACTAG

Upstream 100 bases:

>100_bases
GTGGTGCACCTGGTGCTATCTGGGGTTACACCCCTACAACTGGCTAGTCTGGCTGAATAGGGCTACGGACTTTGGTCTGT
AGCCCGATAAAGGAGTGAGT

Downstream 100 bases:

>100_bases
CGCTTTAGTTATCAGTAAAAATGCCTCGACTCAGTCGGGGCATTTTTGTTTTTGTTGGTTTTCAACTTGTTATATTAGCT
GCAGCCATATTAGGAATGGG

Product: formate dehydrogenase subunit gamma

Products: CO2; NADH

Alternate protein names: Formate Dehydrogenase Cytochrome; Formate Dehydrogenase Subunit C; Formate Dehydrogenase Cytochrome B Subunit; Formate Dehydrogenase Subunit Gamma; Formate Dehydrogenase C Subunit; Formate Dehydrogenase; Formate Dehydrogenase-N; Cytochrome B Subunit Of Formate Dehydrogenase; Formate Dehydrogenase B-Type Cytochrome Subunit; Formate Dehydrogenase Subunit C FdnI; Formate Dehydrogenase Cytochromesubunit B; Cytochrome; Formate Dehydrogenase Cytochrome C Subunit Gamma Subunit; Formate Dehydrogenase N Gamma Subunit

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MFMKSLRSLFALLVIPLMLSMGLGLSASAMAADDQTSQQQAATNDADLWRAVKAGDSGYTVAKGIETGVLINVIGNEGKI
VRNEYLTPVMGITVVGVFAAFLFFYLVNGPSKLSKGFSGKMVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKHVLQPY
VGEGLWAGLIYGSKTIHDWVGPIFIVSWILCVVKWMPMQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
TLTLFGLFIAASGLMLVLPGLDLPREASMAALLIHSISAIIIIAFTIVHIWMATVLSEGGMECMVSGYCDENWAVQHHNL
WYDELKDSNSIVYKD

Sequences:

>Translated_335_residues
MFMKSLRSLFALLVIPLMLSMGLGLSASAMAADDQTSQQQAATNDADLWRAVKAGDSGYTVAKGIETGVLINVIGNEGKI
VRNEYLTPVMGITVVGVFAAFLFFYLVNGPSKLSKGFSGKMVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKHVLQPY
VGEGLWAGLIYGSKTIHDWVGPIFIVSWILCVVKWMPMQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
TLTLFGLFIAASGLMLVLPGLDLPREASMAALLIHSISAIIIIAFTIVHIWMATVLSEGGMECMVSGYCDENWAVQHHNL
WYDELKDSNSIVYKD
>Mature_335_residues
MFMKSLRSLFALLVIPLMLSMGLGLSASAMAADDQTSQQQAATNDADLWRAVKAGDSGYTVAKGIETGVLINVIGNEGKI
VRNEYLTPVMGITVVGVFAAFLFFYLVNGPSKLSKGFSGKMVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKHVLQPY
VGEGLWAGLIYGSKTIHDWVGPIFIVSWILCVVKWMPMQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
TLTLFGLFIAASGLMLVLPGLDLPREASMAALLIHSISAIIIIAFTIVHIWMATVLSEGGMECMVSGYCDENWAVQHHNL
WYDELKDSNSIVYKD

Specific function: Allows To Use Formate As Major Electron Donor During Aerobic Respiration. Subunit Gamma Is Probably The Cytochrome B556(Fdo) Component Of The Formate Dehydrogenase. [C]

COG id: COG2864

COG function: function code C; Cytochrome b subunit of formate dehydrogenase

Gene ontology:

Cell location: Integral Membrane Protein [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.2.1.2

Molecular weight: Translated: 37026; Mature: 37026

Theoretical pI: Translated: 7.23; Mature: 7.23

Prosite motif: PS00107 PROTEIN_KINASE_ATP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFMKSLRSLFALLVIPLMLSMGLGLSASAMAADDQTSQQQAATNDADLWRAVKAGDSGYT
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCE
VAKGIETGVLINVIGNEGKIVRNEYLTPVMGITVVGVFAAFLFFYLVNGPSKLSKGFSGK
ECCCCCCCEEEEEECCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
MVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKHVLQPYVGEGLWAGLIYGSKTIHDWV
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
GPIFIVSWILCVVKWMPMQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
HHHHHHHHHHHHHHHCCCHHHHHHCEEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHHH
TLTLFGLFIAASGLMLVLPGLDLPREASMAALLIHSISAIIIIAFTIVHIWMATVLSEGG
HHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MECMVSGYCDENWAVQHHNLWYDELKDSNSIVYKD
CEEEEECCCCCCCCEEECCCCHHHHCCCCCEEECC
>Mature Secondary Structure
MFMKSLRSLFALLVIPLMLSMGLGLSASAMAADDQTSQQQAATNDADLWRAVKAGDSGYT
CCHHHHHHHHHHHHHHHHHHCCCCCCCHHHCCCCCHHHHHHCCCHHHHHHHHHCCCCCCE
VAKGIETGVLINVIGNEGKIVRNEYLTPVMGITVVGVFAAFLFFYLVNGPSKLSKGFSGK
ECCCCCCCEEEEEECCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCC
MVLRWSKADLWIHWVLATSCLALIFTGLNIMLGKHVLQPYVGEGLWAGLIYGSKTIHDWV
EEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHH
GPIFIVSWILCVVKWMPMQTFKMYDLKWFLVVGGYINFGPFKGKHPDSGFANAGEKMWFW
HHHHHHHHHHHHHHHCCCHHHHHHCEEEEEEECCCEECCCCCCCCCCCCCCCCCCHHHHH
TLTLFGLFIAASGLMLVLPGLDLPREASMAALLIHSISAIIIIAFTIVHIWMATVLSEGG
HHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MECMVSGYCDENWAVQHHNLWYDELKDSNSIVYKD
CEEEEECCCCCCCCEEECCCCHHHHCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: formate; NAD+

Specific reaction: formate + NAD+ = CO2 + NADH

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA