Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963905

Identifier: 157963905

GI number: 157963905

Start: 4978937

End: 4979749

Strand: Direct

Name: 157963905

Synonym: Spea_4094

Alternate gene names: NA

Gene position: 4978937-4979749 (Clockwise)

Preceding gene: 157963902

Following gene: 157963906

Centisome position: 96.22

GC content: 44.65

Gene sequence:

>813_bases
ATGCTAAACCTTAAACGCGTTGTTGGCCTTGCGGTTACCGCTGCACTATTTGTTGGTATGCCAGCCCAAGCTAACGAAGT
TATTAAGCTTGCAACAACGACAAGTACTGAAAACTCAGGCCTACTAAAAAACCTACTACCTAAGTTTGAGGCTGAATCAG
GCTACAAGGTACAAGTTATTGCTACTGGTACAGGTAAGGCGCTAAAGCTTGCTCGCCAAGGCGACGTTGATGTGGTCATG
ACTCACGCTCCAGGCGCTGAAGCAAAATTCGTTGAAGAAGGCTACGGTCGTCTTCCACGTGGCATCATGGAAAACGACTT
CGTTGTTCTAGGTCCAAAGAACGATCCAGCTAAAATCCGTTCAAGTAAAACGGCTGAAGAAGCATTTGCTAAAATCGCTA
AATCAGGCGTGCCTTTCATCTCTCGTGGTGACAACTCTGGCACCAACATGAAAGAACTGCTTGTATGGAAGAATGCTAAT
ATTACTCCAGACTTCAAAGGTTACACTGCGGTTGGTCAAGGAATGGGCAAAACCCTATTAATGGCTAGCGAATTAGAAGC
TTATACACTATCTGACCGTGGTACTTTTGTTGCTTATTCAGGTAAAATAGACCTAGCAGTAGATTTCGATGGCGGTCCAG
CACTAGCTAACCCATACCAAATCATACTAATCAGTGAAAGCAAGTACCCAACGCTAAATCATAAGGGTGCTCAAGCATTG
AGCGACTGGCTGATCGGCGCTGAAGCGCAAGGCATGATCAACAATTATAAAGTTCAGGGTGAACAATTGTTCAAGGCAAC
ATATAGCGAATGA

Upstream 100 bases:

>100_bases
ATACAAGCATGGCATTAAACTTGCTTTTAGAGAGGCTGATTCGATTTTTTAACAGGCCTCAGGTATCGAGTGGCCTATTT
TATTTTTCCAAGGAGTTAAA

Downstream 100 bases:

>100_bases
ATGAAGGCTGGTTAGCCCTTATACAGCAGGCATTAAGCCTGCTGTTTTCATTGGACCCCGAAGTGTGGTCCATTATCTCT
GTCTCTTTTGCAGTATCATT

Product: extracellular solute-binding protein

Products: NA

Alternate protein names: Signal Peptide Protein; TUNGstate ABC Transporter Permease; Molybdate Or TUNGstate Transport; TUNGstate ABC Transporter Permease-Like Protein; TUNGstate Abc Transporter Permease; Signal Peptide; ABC-Type Transport Protein Permease Component; ABC Transporter; Basic Organic Compound ABC-Transporter; ABC Transporter Permease Protein; ABC TUNGstate Transporter Permease Component; ABC-Type Transport System Permease Component; ABC Transporter Periplasmic Protein; ABC-Type TUNGstate Transport System Permease Component-Like; Periplasmic Protein

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MLNLKRVVGLAVTAALFVGMPAQANEVIKLATTTSTENSGLLKNLLPKFEAESGYKVQVIATGTGKALKLARQGDVDVVM
THAPGAEAKFVEEGYGRLPRGIMENDFVVLGPKNDPAKIRSSKTAEEAFAKIAKSGVPFISRGDNSGTNMKELLVWKNAN
ITPDFKGYTAVGQGMGKTLLMASELEAYTLSDRGTFVAYSGKIDLAVDFDGGPALANPYQIILISESKYPTLNHKGAQAL
SDWLIGAEAQGMINNYKVQGEQLFKATYSE

Sequences:

>Translated_270_residues
MLNLKRVVGLAVTAALFVGMPAQANEVIKLATTTSTENSGLLKNLLPKFEAESGYKVQVIATGTGKALKLARQGDVDVVM
THAPGAEAKFVEEGYGRLPRGIMENDFVVLGPKNDPAKIRSSKTAEEAFAKIAKSGVPFISRGDNSGTNMKELLVWKNAN
ITPDFKGYTAVGQGMGKTLLMASELEAYTLSDRGTFVAYSGKIDLAVDFDGGPALANPYQIILISESKYPTLNHKGAQAL
SDWLIGAEAQGMINNYKVQGEQLFKATYSE
>Mature_270_residues
MLNLKRVVGLAVTAALFVGMPAQANEVIKLATTTSTENSGLLKNLLPKFEAESGYKVQVIATGTGKALKLARQGDVDVVM
THAPGAEAKFVEEGYGRLPRGIMENDFVVLGPKNDPAKIRSSKTAEEAFAKIAKSGVPFISRGDNSGTNMKELLVWKNAN
ITPDFKGYTAVGQGMGKTLLMASELEAYTLSDRGTFVAYSGKIDLAVDFDGGPALANPYQIILISESKYPTLNHKGAQAL
SDWLIGAEAQGMINNYKVQGEQLFKATYSE

Specific function: Unknown

COG id: COG2998

COG function: function code H; ABC-type tungstate transport system, permease component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28913; Mature: 28913

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNLKRVVGLAVTAALFVGMPAQANEVIKLATTTSTENSGLLKNLLPKFEAESGYKVQVI
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEE
ATGTGKALKLARQGDVDVVMTHAPGAEAKFVEEGYGRLPRGIMENDFVVLGPKNDPAKIR
EECCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHC
SSKTAEEAFAKIAKSGVPFISRGDNSGTNMKELLVWKNANITPDFKGYTAVGQGMGKTLL
CCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEE
MASELEAYTLSDRGTFVAYSGKIDLAVDFDGGPALANPYQIILISESKYPTLNHKGAQAL
EEECCCEEEECCCCEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHH
SDWLIGAEAQGMINNYKVQGEQLFKATYSE
HHHHCCCCCCCCCCCEEECHHHHHHHHCCC
>Mature Secondary Structure
MLNLKRVVGLAVTAALFVGMPAQANEVIKLATTTSTENSGLLKNLLPKFEAESGYKVQVI
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCEEEEE
ATGTGKALKLARQGDVDVVMTHAPGAEAKFVEEGYGRLPRGIMENDFVVLGPKNDPAKIR
EECCCCEEEEEECCCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCEEEECCCCCCHHHC
SSKTAEEAFAKIAKSGVPFISRGDNSGTNMKELLVWKNANITPDFKGYTAVGQGMGKTLL
CCCCHHHHHHHHHHCCCCEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHCCCCCEEE
MASELEAYTLSDRGTFVAYSGKIDLAVDFDGGPALANPYQIILISESKYPTLNHKGAQAL
EEECCCEEEECCCCEEEEECCEEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHHH
SDWLIGAEAQGMINNYKVQGEQLFKATYSE
HHHHCCCCCCCCCCCEEECHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA