| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yeiH [C]
Identifier: 157963892
GI number: 157963892
Start: 4961634
End: 4962614
Strand: Direct
Name: yeiH [C]
Synonym: Spea_4081
Alternate gene names: 157963892
Gene position: 4961634-4962614 (Clockwise)
Preceding gene: 157963891
Following gene: 157963900
Centisome position: 95.88
GC content: 49.03
Gene sequence:
>981_bases ATGACAGCTAAAACCCAGAATCCCCCACAGAAACAACTCCAGAATCAAGCCCAGCCTCCTAATAAGCTTCATTTAGTCGT CTTTATTATTGCTGGTCTTTTCTGCCTGTTACCTATGGTGTCATCACCTGTGGCGTTGATCTTGGGCTTCACTTTGGCCA GCATTGGCTGGGCGCCGGATCAAATACACCTAGGGGCACTGACCAAGAAGCTTTTGGCTTACTCGATTGTAGGTTTAGGT TTTGGTATTCAATTAGACGCAGCGGTCAGAATCAGTCTGCAAAACTTGCCACTCATTCTGGGCTCGATTGTATTGACCTT GATACTAGGTTTGGCACTCACGCGATTGCTCAAGCTGGATCATAAAACTGGCTACCTGATCGCCTCAGGCACCGCCATTT GTGGTGGCAGCGCCATTGCCGCGGTATCACCAGCAATTAGAGCGAACAGTGAACAAACGGCTATCGCCTTAGCCACGGTA TTTATCCTTAACTCTGTCGCGCTGTTTGTGTTTCCAGCCATCGGCCATGCACTCTCTATGAGTCAGCATGATTTTGGCGT GTGGAGTGCGATTGCCATCCACGACACCTCTTCTGTGGTTGGTGCAGCCTCGGCCTATGGTAATGAAGCGCTGACCACTG CCACCACGATTAAGCTAGCACGAGCGCTATGGATCATCCCTATCGCGTTAATCAGCGCCATGCTGTTTAAAGGCGATAAG AATAAGATGGCCATCCCCTACTTTATCGGCTTCTACTGTTTAGCTATCGCCATCGCACATTTTGTGCCAGCGGGAGAAGC AGCCTACAGCGCAATATTTGAGATATCCAAGCGAGTGTTGGTGGTGTGTCTATTCTTGATTGGTGCAGGAATTACCATTC AGAAGATGAAAGCCACTGGCCCTAAGCCACTGATTTTAGGGGTGCTACTGTGGTTAGCCATTGGCAGTGCTTCACTGACT TATATTCTGTTGCTGAGCTAG
Upstream 100 bases:
>100_bases CAATTATATTTACGCTAACTATCAGCACTATTTAATTTATCAAAACAAGTGCAAGCGCTATACTTTAAAGCCGACCCGCC TTTTTCTGCAGCCTTAATTG
Downstream 100 bases:
>100_bases CTGAAGTGATTATTAGTAGCGTACTTAGTTTTAATTGCTACCAGCATTCAGAAAATGAAAGCCACCGGCCCTAAACCGTC CCTCTTCAAAGCCTAGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTAKTQNPPQKQLQNQAQPPNKLHLVVFIIAGLFCLLPMVSSPVALILGFTLASIGWAPDQIHLGALTKKLLAYSIVGLG FGIQLDAAVRISLQNLPLILGSIVLTLILGLALTRLLKLDHKTGYLIASGTAICGGSAIAAVSPAIRANSEQTAIALATV FILNSVALFVFPAIGHALSMSQHDFGVWSAIAIHDTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDK NKMAIPYFIGFYCLAIAIAHFVPAGEAAYSAIFEISKRVLVVCLFLIGAGITIQKMKATGPKPLILGVLLWLAIGSASLT YILLLS
Sequences:
>Translated_326_residues MTAKTQNPPQKQLQNQAQPPNKLHLVVFIIAGLFCLLPMVSSPVALILGFTLASIGWAPDQIHLGALTKKLLAYSIVGLG FGIQLDAAVRISLQNLPLILGSIVLTLILGLALTRLLKLDHKTGYLIASGTAICGGSAIAAVSPAIRANSEQTAIALATV FILNSVALFVFPAIGHALSMSQHDFGVWSAIAIHDTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDK NKMAIPYFIGFYCLAIAIAHFVPAGEAAYSAIFEISKRVLVVCLFLIGAGITIQKMKATGPKPLILGVLLWLAIGSASLT YILLLS >Mature_325_residues TAKTQNPPQKQLQNQAQPPNKLHLVVFIIAGLFCLLPMVSSPVALILGFTLASIGWAPDQIHLGALTKKLLAYSIVGLGF GIQLDAAVRISLQNLPLILGSIVLTLILGLALTRLLKLDHKTGYLIASGTAICGGSAIAAVSPAIRANSEQTAIALATVF ILNSVALFVFPAIGHALSMSQHDFGVWSAIAIHDTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDKN KMAIPYFIGFYCLAIAIAHFVPAGEAAYSAIFEISKRVLVVCLFLIGAGITIQKMKATGPKPLILGVLLWLAIGSASLTY ILLLS
Specific function: Unknown
COG id: COG2855
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0324 family [H]
Homologues:
Organism=Escherichia coli, GI1788482, Length=269, Percent_Identity=26.7657992565056, Blast_Score=91, Evalue=1e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018383 [H]
Pfam domain/function: PF03601 Cons_hypoth698 [H]
EC number: NA
Molecular weight: Translated: 34261; Mature: 34130
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAKTQNPPQKQLQNQAQPPNKLHLVVFIIAGLFCLLPMVSSPVALILGFTLASIGWAPD CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC QIHLGALTKKLLAYSIVGLGFGIQLDAAVRISLQNLPLILGSIVLTLILGLALTRLLKLD HHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC HKTGYLIASGTAICGGSAIAAVSPAIRANSEQTAIALATVFILNSVALFVFPAIGHALSM CCCCEEEECCCEEECCCHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SQHDFGVWSAIAIHDTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDK CCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NKMAIPYFIGFYCLAIAIAHFVPAGEAAYSAIFEISKRVLVVCLFLIGAGITIQKMKATG CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC PKPLILGVLLWLAIGSASLTYILLLS CCHHHHHHHHHHHHCCCCEEEEEEEC >Mature Secondary Structure TAKTQNPPQKQLQNQAQPPNKLHLVVFIIAGLFCLLPMVSSPVALILGFTLASIGWAPD CCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC QIHLGALTKKLLAYSIVGLGFGIQLDAAVRISLQNLPLILGSIVLTLILGLALTRLLKLD HHHHHHHHHHHHHHHHHHHCCCEEECCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHC HKTGYLIASGTAICGGSAIAAVSPAIRANSEQTAIALATVFILNSVALFVFPAIGHALSM CCCCEEEECCCEEECCCHHHHHCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SQHDFGVWSAIAIHDTSSVVGAASAYGNEALTTATTIKLARALWIIPIALISAMLFKGDK CCCCCCCEEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC NKMAIPYFIGFYCLAIAIAHFVPAGEAAYSAIFEISKRVLVVCLFLIGAGITIQKMKATG CCEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC PKPLILGVLLWLAIGSASLTYILLLS CCHHHHHHHHHHHHCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]