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The map label for this gene is fixA [H]

Identifier: 157963850

GI number: 157963850

Start: 4906269

End: 4907042

Strand: Direct

Name: fixA [H]

Synonym: Spea_4039

Alternate gene names: 157963850

Gene position: 4906269-4907042 (Clockwise)

Preceding gene: 157963840

Following gene: 157963851

Centisome position: 94.81

GC content: 44.83

Gene sequence:

>774_bases
ATGAAAATTATTACGTGTTACAAATTAGTGCCAGAAGAGCAAGATATCACAGTAACGGCTGATGGTAACTTAGACACCAA
TAAGGCAGCCCCTAAAATTAACCCTTTTGATCTCTGCGCTGTAGAAGCTGGAGTTCAACTAAAAAGCCTAATTGAGGGAT
GCAGCATTACAGCAATGAGTGTAGGCGGCAAAGCACTAGAGAACCCGAAAGCACGCAAAGACATTCTTTCCCGTGGACCA
GATGACTTAACTGTCGTTATTGATGAAAAGTTCGAGCAACTTTTACCACACCAAACAGCCAGAGTATTGATGGCAGCAGC
ACAAAAAACAGGTTTCGACCTAATCATTTGTGGTGATGGTTCAGGCGACCTTTACGCCCAGCAGGTTGGCCTACAGTTAG
GCGAGTTACTCGGTGTCGCGAACATCAACGCCGTTAGCAAAATTAGCTCTGCAGAGCCAGGCAAACTAACAGTCGAACGC
TCATTAGACGATGAAGTGGAAGTCCTAGAAATAACCTTACCAGCCGTAATCTCTGTATCTGCAGATATTAATGAGCCAAG
TATTCCATCGATGAAAACCATTCTTGCCGCAGCTAAAAAGCCTGTTACTAGCCTAACGGCCACTGATATTGAGCTAGCTG
AGTTCCCAGCCCTTGTTGAACTGGTCTCTGTTATCGCACCAGAACAAAAAGCACGGCAGAAGATCGTTATCGAAGGTGAT
GACGAGCAACAGATAGCCCAATTCGCAGAACACTTACGTAAAGCACTTAACTAA

Upstream 100 bases:

>100_bases
GATAAATTCAAATCAACATATAAAAGATAGAAGTATTAGTCTCGGCATTAAATTGATTTTGGGTATTAGGTTAAGTACTT
AATATTTAACGGGAGAAATA

Downstream 100 bases:

>100_bases
TTAAGGATAAATGATGAGCAAACTATCTAATATTTGGGTATTTAGCGATATCGCTTCCCGTTTACCTGAAATGATCGCAG
CTGGCGTAGCGTTAGGCGAA

Product: putative electron transfer flavoprotein FixA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 257

Protein sequence:

>257_residues
MKIITCYKLVPEEQDITVTADGNLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMSVGGKALENPKARKDILSRGP
DDLTVVIDEKFEQLLPHQTARVLMAAAQKTGFDLIICGDGSGDLYAQQVGLQLGELLGVANINAVSKISSAEPGKLTVER
SLDDEVEVLEITLPAVISVSADINEPSIPSMKTILAAAKKPVTSLTATDIELAEFPALVELVSVIAPEQKARQKIVIEGD
DEQQIAQFAEHLRKALN

Sequences:

>Translated_257_residues
MKIITCYKLVPEEQDITVTADGNLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMSVGGKALENPKARKDILSRGP
DDLTVVIDEKFEQLLPHQTARVLMAAAQKTGFDLIICGDGSGDLYAQQVGLQLGELLGVANINAVSKISSAEPGKLTVER
SLDDEVEVLEITLPAVISVSADINEPSIPSMKTILAAAKKPVTSLTATDIELAEFPALVELVSVIAPEQKARQKIVIEGD
DEQQIAQFAEHLRKALN
>Mature_257_residues
MKIITCYKLVPEEQDITVTADGNLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMSVGGKALENPKARKDILSRGP
DDLTVVIDEKFEQLLPHQTARVLMAAAQKTGFDLIICGDGSGDLYAQQVGLQLGELLGVANINAVSKISSAEPGKLTVER
SLDDEVEVLEITLPAVISVSADINEPSIPSMKTILAAAKKPVTSLTATDIELAEFPALVELVSVIAPEQKARQKIVIEGD
DEQQIAQFAEHLRKALN

Specific function: Required for anaerobic carnitine reduction. May bring reductant to CaiA [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Escherichia coli, GI87081682, Length=257, Percent_Identity=62.2568093385214, Blast_Score=283, Evalue=6e-78,
Organism=Escherichia coli, GI2367123, Length=257, Percent_Identity=52.9182879377432, Blast_Score=258, Evalue=2e-70,
Organism=Caenorhabditis elegans, GI25141345, Length=182, Percent_Identity=26.3736263736264, Blast_Score=67, Evalue=6e-12,
Organism=Saccharomyces cerevisiae, GI6321646, Length=204, Percent_Identity=28.921568627451, Blast_Score=78, Evalue=1e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 27424; Mature: 27424

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: PS01065 ETF_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIITCYKLVPEEQDITVTADGNLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMS
CEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEE
VGGKALENPKARKDILSRGPDDLTVVIDEKFEQLLPHQTARVLMAAAQKTGFDLIICGDG
CCCHHHCCCHHHHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECC
SGDLYAQQVGLQLGELLGVANINAVSKISSAEPGKLTVERSLDDEVEVLEITLPAVISVS
CCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEEEEEECEEEEEE
ADINEPSIPSMKTILAAAKKPVTSLTATDIELAEFPALVELVSVIAPEQKARQKIVIEGD
CCCCCCCCCHHHHHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHHCCCHHHCCEEEEECC
DEQQIAQFAEHLRKALN
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKIITCYKLVPEEQDITVTADGNLDTNKAAPKINPFDLCAVEAGVQLKSLIEGCSITAMS
CEEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHCCCCEEEEE
VGGKALENPKARKDILSRGPDDLTVVIDEKFEQLLPHQTARVLMAAAQKTGFDLIICGDG
CCCHHHCCCHHHHHHHHCCCCCEEEEEEHHHHHHCCHHHHHHHHHHHHCCCCEEEEEECC
SGDLYAQQVGLQLGELLGVANINAVSKISSAEPGKLTVERSLDDEVEVLEITLPAVISVS
CCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCEEEEECCCCCCEEEEEEEECEEEEEE
ADINEPSIPSMKTILAAAKKPVTSLTATDIELAEFPALVELVSVIAPEQKARQKIVIEGD
CCCCCCCCCHHHHHHHHHCCCCCHHEECCCHHHHHHHHHHHHHHHCCCHHHCCEEEEECC
DEQQIAQFAEHLRKALN
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA