| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is menE [H]
Identifier: 157963785
GI number: 157963785
Start: 4828495
End: 4829949
Strand: Direct
Name: menE [H]
Synonym: Spea_3974
Alternate gene names: 157963785
Gene position: 4828495-4829949 (Clockwise)
Preceding gene: 157963784
Following gene: 157963787
Centisome position: 93.31
GC content: 51.2
Gene sequence:
>1455_bases ATGCAAGCTCAGGCAATATCACCAATACATCAAGTTGCTCAGCGTAATAGCGCTGCACAGGCTTACCGGTTTATGGGGCA AAGCGTTAGCTACGGCTCACTTAGCCAAGGTGTTATTTCGTTAGCCGAGCAGCTATCAGCCATGGGCTTAAAACGCGGTG ACCGCTTAGCTTGTATCGGCCATAACTGTCCGCAACTACTGCAGATCTACTGGGCTTGTGTCGATAGCGGTGTACTCTTC TGCCCCATCTCACCGCGTTTTACCAGCCAGCAAATTATCGAGCTGATGCAGACTCATAGTTATCACCGCTATTGGCTCGC AGCTGACACCCCGGCGGACTCGACACTGATTCAAGCCTTAAATCATCAAAACCAGTTTGAGTCAGTGACGCTAGATTTTA CTCGCCAAAGCCAGCGGTCAGCGCCAGCCCTAGAGCCTCACATCGCCGTTAACGCTATTCTCACCTCCGGCAGCAGCGGT ACACCTAAAGCCGCCGCCCACAGCCTAGCGAATCATATCGCCAGCGCCAAAGGTTCGAGAGAATTAATAAAGTTAGCAGC AGAAGATAGCTGGTTATTGTCGCTACCACTGTTTCATATCGGTGGCCTCGCGATTTTAAACCGCTGCGCCCTCGCAGGCG CCTGCGTGGTATTTGAAGACAAGCGGCTATCACTCGCCCAGCAGCTTGTTCGTGACAAGATTAGCCACCTCTCCTTAGTG AGCGCACAACTGCAGCAGCTGCTTGCAAATAGTGATAGCGAAAATGCCAATAACGACTGCTTAAACCAAGTCAAAGCCAT GCTACTCGGAGGCGGCGCGATCTCAGGCGACCTATTAGCAGAATTAGCCAAGCGCGACATAAAGGCCTACACCAGCTACG GCATGACAGAGATGGGATCGCAGATCACCACAGGCATTGCCCGCACCGACGGATCCAGCGGCAAGCTGTTATCGGGACGA GAACTGAAGATTATCGATGGTGAAATATGGCTAAAAGGCGAGTGTCTGTTTCTTGGATATTTAAGCGAGGACGGTTTAAA TTTACCGCTCAATAAAGACGGCTGGTTCTACACCAAAGATCTAGGCCACTTTGATGCAAACGCCAATCTCTGCATCGACG GCCGCGCCGATAACATGTTTATCAGCGGCGGCGAAAACATCCAACCCGAAGAGATAGAAGCCGCTTTAAAGCTGCACCCG TTAATCAGCGATGCCATCGTGTTCCCTGTGGCAGATGCCAAGTTTGGTAATCTCCCAGCAGCCATTCTTAAGTTAAATGA GAGTAAGCTGAATAACAGTTCAGCTAACCAGCCTTTGGAAGCCGAGCTAACAGAGTTCCTCGCCGACAAGATCGCCCGCT TCAAAAGGCCAAGGCAATATTACCCTTGGCCAGAGGTCAGCAGCGCCGGGATTAAGGTTGTACGCAAACAGGTGATAGAG GCAGTTAAGCGTTAG
Upstream 100 bases:
>100_bases CACTAATCAGCCTAAGCTAGTCAAAACCAGATTAGAACTAATCCTTGGTCAGTGTTAGTTTGGCTCAATCAAAAAGATAA ATTCGATAACGGATCTCAGC
Downstream 100 bases:
>100_bases CGACTTAATCACCAGCGCTGCTTTGCGGCATCCAGCTTTTAAGGCACGAAGTGAGTTGACTTGTTAAGTGCTTTCATTGG ATTGCTCTTTGATTTGTTTT
Product: O-succinylbenzoate-CoA ligase
Products: NA
Alternate protein names: o-succinylbenzoyl-CoA synthetase; OSB-CoA synthetase [H]
Number of amino acids: Translated: 484; Mature: 484
Protein sequence:
>484_residues MQAQAISPIHQVAQRNSAAQAYRFMGQSVSYGSLSQGVISLAEQLSAMGLKRGDRLACIGHNCPQLLQIYWACVDSGVLF CPISPRFTSQQIIELMQTHSYHRYWLAADTPADSTLIQALNHQNQFESVTLDFTRQSQRSAPALEPHIAVNAILTSGSSG TPKAAAHSLANHIASAKGSRELIKLAAEDSWLLSLPLFHIGGLAILNRCALAGACVVFEDKRLSLAQQLVRDKISHLSLV SAQLQQLLANSDSENANNDCLNQVKAMLLGGGAISGDLLAELAKRDIKAYTSYGMTEMGSQITTGIARTDGSSGKLLSGR ELKIIDGEIWLKGECLFLGYLSEDGLNLPLNKDGWFYTKDLGHFDANANLCIDGRADNMFISGGENIQPEEIEAALKLHP LISDAIVFPVADAKFGNLPAAILKLNESKLNNSSANQPLEAELTEFLADKIARFKRPRQYYPWPEVSSAGIKVVRKQVIE AVKR
Sequences:
>Translated_484_residues MQAQAISPIHQVAQRNSAAQAYRFMGQSVSYGSLSQGVISLAEQLSAMGLKRGDRLACIGHNCPQLLQIYWACVDSGVLF CPISPRFTSQQIIELMQTHSYHRYWLAADTPADSTLIQALNHQNQFESVTLDFTRQSQRSAPALEPHIAVNAILTSGSSG TPKAAAHSLANHIASAKGSRELIKLAAEDSWLLSLPLFHIGGLAILNRCALAGACVVFEDKRLSLAQQLVRDKISHLSLV SAQLQQLLANSDSENANNDCLNQVKAMLLGGGAISGDLLAELAKRDIKAYTSYGMTEMGSQITTGIARTDGSSGKLLSGR ELKIIDGEIWLKGECLFLGYLSEDGLNLPLNKDGWFYTKDLGHFDANANLCIDGRADNMFISGGENIQPEEIEAALKLHP LISDAIVFPVADAKFGNLPAAILKLNESKLNNSSANQPLEAELTEFLADKIARFKRPRQYYPWPEVSSAGIKVVRKQVIE AVKR >Mature_484_residues MQAQAISPIHQVAQRNSAAQAYRFMGQSVSYGSLSQGVISLAEQLSAMGLKRGDRLACIGHNCPQLLQIYWACVDSGVLF CPISPRFTSQQIIELMQTHSYHRYWLAADTPADSTLIQALNHQNQFESVTLDFTRQSQRSAPALEPHIAVNAILTSGSSG TPKAAAHSLANHIASAKGSRELIKLAAEDSWLLSLPLFHIGGLAILNRCALAGACVVFEDKRLSLAQQLVRDKISHLSLV SAQLQQLLANSDSENANNDCLNQVKAMLLGGGAISGDLLAELAKRDIKAYTSYGMTEMGSQITTGIARTDGSSGKLLSGR ELKIIDGEIWLKGECLFLGYLSEDGLNLPLNKDGWFYTKDLGHFDANANLCIDGRADNMFISGGENIQPEEIEAALKLHP LISDAIVFPVADAKFGNLPAAILKLNESKLNNSSANQPLEAELTEFLADKIARFKRPRQYYPWPEVSSAGIKVVRKQVIE AVKR
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=526, Percent_Identity=22.4334600760456, Blast_Score=101, Evalue=2e-21, Organism=Homo sapiens, GI115511026, Length=474, Percent_Identity=23.8396624472574, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI122937307, Length=469, Percent_Identity=23.6673773987207, Blast_Score=87, Evalue=4e-17, Organism=Homo sapiens, GI42544132, Length=469, Percent_Identity=23.6673773987207, Blast_Score=79, Evalue=9e-15, Organism=Homo sapiens, GI27477105, Length=134, Percent_Identity=35.8208955223881, Blast_Score=78, Evalue=1e-14, Organism=Escherichia coli, GI1788595, Length=480, Percent_Identity=32.7083333333333, Blast_Score=232, Evalue=5e-62, Organism=Escherichia coli, GI145693145, Length=501, Percent_Identity=24.5508982035928, Blast_Score=114, Evalue=1e-26, Organism=Escherichia coli, GI221142682, Length=474, Percent_Identity=24.0506329113924, Blast_Score=92, Evalue=7e-20, Organism=Escherichia coli, GI1788107, Length=509, Percent_Identity=20.8251473477407, Blast_Score=82, Evalue=8e-17, Organism=Escherichia coli, GI1786810, Length=511, Percent_Identity=22.3091976516634, Blast_Score=72, Evalue=6e-14, Organism=Caenorhabditis elegans, GI17558820, Length=487, Percent_Identity=26.4887063655031, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI32563687, Length=470, Percent_Identity=23.4042553191489, Blast_Score=125, Evalue=7e-29, Organism=Caenorhabditis elegans, GI17538037, Length=480, Percent_Identity=27.5, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI17559526, Length=339, Percent_Identity=27.7286135693215, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI17557194, Length=478, Percent_Identity=25.7322175732218, Blast_Score=98, Evalue=9e-21, Organism=Caenorhabditis elegans, GI17560308, Length=509, Percent_Identity=21.8074656188605, Blast_Score=97, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71994703, Length=364, Percent_Identity=24.4505494505494, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71994694, Length=364, Percent_Identity=24.4505494505494, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI71994690, Length=364, Percent_Identity=24.4505494505494, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17560140, Length=286, Percent_Identity=25.5244755244755, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17531443, Length=501, Percent_Identity=20.7584830339321, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6319699, Length=412, Percent_Identity=24.2718446601942, Blast_Score=92, Evalue=2e-19, Organism=Drosophila melanogaster, GI24581924, Length=528, Percent_Identity=25.5681818181818, Blast_Score=105, Evalue=1e-22, Organism=Drosophila melanogaster, GI24648260, Length=502, Percent_Identity=24.1035856573705, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI21355181, Length=477, Percent_Identity=23.0607966457023, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI19921316, Length=157, Percent_Identity=32.484076433121, Blast_Score=78, Evalue=1e-14, Organism=Drosophila melanogaster, GI18859661, Length=334, Percent_Identity=23.9520958083832, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI20130357, Length=301, Percent_Identity=27.2425249169435, Blast_Score=73, Evalue=5e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 52613; Mature: 52613
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: PS00018 EF_HAND_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQAISPIHQVAQRNSAAQAYRFMGQSVSYGSLSQGVISLAEQLSAMGLKRGDRLACIG CCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC HNCPQLLQIYWACVDSGVLFCPISPRFTSQQIIELMQTHSYHRYWLAADTPADSTLIQAL CCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH NHQNQFESVTLDFTRQSQRSAPALEPHIAVNAILTSGSSGTPKAAAHSLANHIASAKGSR HCCCCCCEEEEEEHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCH ELIKLAAEDSWLLSLPLFHIGGLAILNRCALAGACVVFEDKRLSLAQQLVRDKISHLSLV HHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHH SAQLQQLLANSDSENANNDCLNQVKAMLLGGGAISGDLLAELAKRDIKAYTSYGMTEMGS HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCH QITTGIARTDGSSGKLLSGRELKIIDGEIWLKGECLFLGYLSEDGLNLPLNKDGWFYTKD HHHHHHHCCCCCCCCEECCCEEEEECCEEEEECCEEEEEEECCCCCCCCCCCCCCEEECC LGHFDANANLCIDGRADNMFISGGENIQPEEIEAALKLHPLISDAIVFPVADAKFGNLPA CCCCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCH AILKLNESKLNNSSANQPLEAELTEFLADKIARFKRPRQYYPWPEVSSAGIKVVRKQVIE HHEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AVKR HHCC >Mature Secondary Structure MQAQAISPIHQVAQRNSAAQAYRFMGQSVSYGSLSQGVISLAEQLSAMGLKRGDRLACIG CCCCCCCHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEC HNCPQLLQIYWACVDSGVLFCPISPRFTSQQIIELMQTHSYHRYWLAADTPADSTLIQAL CCCHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHH NHQNQFESVTLDFTRQSQRSAPALEPHIAVNAILTSGSSGTPKAAAHSLANHIASAKGSR HCCCCCCEEEEEEHHHHHCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCH ELIKLAAEDSWLLSLPLFHIGGLAILNRCALAGACVVFEDKRLSLAQQLVRDKISHLSLV HHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHCEEEEEECHHHHHHHHHHHHHHHHHHHH SAQLQQLLANSDSENANNDCLNQVKAMLLGGGAISGDLLAELAKRDIKAYTSYGMTEMGS HHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHCH QITTGIARTDGSSGKLLSGRELKIIDGEIWLKGECLFLGYLSEDGLNLPLNKDGWFYTKD HHHHHHHCCCCCCCCEECCCEEEEECCEEEEECCEEEEEEECCCCCCCCCCCCCCEEECC LGHFDANANLCIDGRADNMFISGGENIQPEEIEAALKLHPLISDAIVFPVADAKFGNLPA CCCCCCCCCEEEECCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCH AILKLNESKLNNSSANQPLEAELTEFLADKIARFKRPRQYYPWPEVSSAGIKVVRKQVIE HHEEECHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH AVKR HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609; 8206837 [H]