| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is fieF [H]
Identifier: 157963742
GI number: 157963742
Start: 4779643
End: 4780512
Strand: Reverse
Name: fieF [H]
Synonym: Spea_3931
Alternate gene names: 157963742
Gene position: 4780512-4779643 (Counterclockwise)
Preceding gene: 157963743
Following gene: 157963738
Centisome position: 92.38
GC content: 49.66
Gene sequence:
>870_bases ATGAATGACACTTCCCAATACGATTTCTGGGTTAAGTTGGCCAGCCGTGCAGCGGTTGCGACAGCCTTAACCCTTATTAT CATCAAGCTTGCGGCATGGATGTATTCTGGCTCGGCCAGTATGTTGGCATCTTTGACCGACTCTTTTGCCGATGCCTTGG CCTCAATCGTCAATTTCATTGCGATTCGTTATGCCATCGTGCCCGCCGATCAGGAACATCGTTATGGTCACGGTAAAGCC GAGCCTCTAGCGTCGTTGGCGCAATCGGCCTTTATTCTAGGCTCCGCATTTTTGCTGTTTTTCCACGGTGGCGAGCGATT GATTAATCCGGTAGAGGTAAAACATGCCACCTTGGGTGTGATTGTCTCGGTTATCGCGATTGTGCTGACCTTTGCCCTAG TGATGCTTCAGAAAAGAGCTTTAGCGGCGACATCGAGTACTGTGGTTGAGGCTGACTCGCTGCATTATAAGTCGGACCTA TTTTTGAATGCCGCTGTATTACTGGCGCTTATCCTGTCTCAATATGGCTGGTGGTGGGCCGATGGTCTGTTTGCCGTGCT TATCGCGCTATTTATTGGCCAGCAAGCGATTGGATTAGCTTACCGCTCGGTGCAGTCGCTATTAGATAGAGAGCTTGATG ATGAGACCCGAGAGAAAATCGCTGAAATTGCCAAGTACGATCCTCAGGTGAGAGGCATCCACGACTTACGTACTCGTGAG TCGGGTAAGACGATGTTTATTCAGTTCCACCTAGAACTGGATGGCGATTTGAGCTTACATGAGGCTCATAAAATTGCCGT TGAAACCTCCGAGCGAGTGCGGCAAGAGTTTGTCGACTCGGAGGTGATTATTCACCAAGATCCCGTGTAG
Upstream 100 bases:
>100_bases GATTGATTGGTAGTAACTTGAGGGAAATCATCCGATTTTCCCTCAAGTTGTTATAAACTTAGGATCTGTGTTTCCCTTAC TTTATCAGTAAACAGATTTT
Downstream 100 bases:
>100_bases CGGTTTGCGTATAAGCAAAAAAGGAGAGCCTGTGGCTCTCCTTTTTTTCAGTCGCTATTGAAGGGCCTCTAATCCATTTC TAGCTCTTTTAATTTACGGG
Product: cation diffusion facilitator family transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 289; Mature: 289
Protein sequence:
>289_residues MNDTSQYDFWVKLASRAAVATALTLIIIKLAAWMYSGSASMLASLTDSFADALASIVNFIAIRYAIVPADQEHRYGHGKA EPLASLAQSAFILGSAFLLFFHGGERLINPVEVKHATLGVIVSVIAIVLTFALVMLQKRALAATSSTVVEADSLHYKSDL FLNAAVLLALILSQYGWWWADGLFAVLIALFIGQQAIGLAYRSVQSLLDRELDDETREKIAEIAKYDPQVRGIHDLRTRE SGKTMFIQFHLELDGDLSLHEAHKIAVETSERVRQEFVDSEVIIHQDPV
Sequences:
>Translated_289_residues MNDTSQYDFWVKLASRAAVATALTLIIIKLAAWMYSGSASMLASLTDSFADALASIVNFIAIRYAIVPADQEHRYGHGKA EPLASLAQSAFILGSAFLLFFHGGERLINPVEVKHATLGVIVSVIAIVLTFALVMLQKRALAATSSTVVEADSLHYKSDL FLNAAVLLALILSQYGWWWADGLFAVLIALFIGQQAIGLAYRSVQSLLDRELDDETREKIAEIAKYDPQVRGIHDLRTRE SGKTMFIQFHLELDGDLSLHEAHKIAVETSERVRQEFVDSEVIIHQDPV >Mature_289_residues MNDTSQYDFWVKLASRAAVATALTLIIIKLAAWMYSGSASMLASLTDSFADALASIVNFIAIRYAIVPADQEHRYGHGKA EPLASLAQSAFILGSAFLLFFHGGERLINPVEVKHATLGVIVSVIAIVLTFALVMLQKRALAATSSTVVEADSLHYKSDL FLNAAVLLALILSQYGWWWADGLFAVLIALFIGQQAIGLAYRSVQSLLDRELDDETREKIAEIAKYDPQVRGIHDLRTRE SGKTMFIQFHLELDGDLSLHEAHKIAVETSERVRQEFVDSEVIIHQDPV
Specific function: Cation-efflux transporter that may have a role in detoxification [H]
COG id: COG0053
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family. FieF subfamily [H]
Homologues:
Organism=Homo sapiens, GI57164948, Length=250, Percent_Identity=26.8, Blast_Score=69, Evalue=6e-12, Organism=Escherichia coli, GI1790349, Length=265, Percent_Identity=49.4339622641509, Blast_Score=260, Evalue=6e-71,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002524 [H]
Pfam domain/function: PF01545 Cation_efflux [H]
EC number: NA
Molecular weight: Translated: 31914; Mature: 31914
Theoretical pI: Translated: 5.53; Mature: 5.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDTSQYDFWVKLASRAAVATALTLIIIKLAAWMYSGSASMLASLTDSFADALASIVNFI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AIRYAIVPADQEHRYGHGKAEPLASLAQSAFILGSAFLLFFHGGERLINPVEVKHATLGV HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHCCHHHHHHHHHHH IVSVIAIVLTFALVMLQKRALAATSSTVVEADSLHYKSDLFLNAAVLLALILSQYGWWWA HHHHHHHHHHHHHHHHHHHHHHHHCHHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCHHHH DGLFAVLIALFIGQQAIGLAYRSVQSLLDRELDDETREKIAEIAKYDPQVRGIHDLRTRE HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCC SGKTMFIQFHLELDGDLSLHEAHKIAVETSERVRQEFVDSEVIIHQDPV CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC >Mature Secondary Structure MNDTSQYDFWVKLASRAAVATALTLIIIKLAAWMYSGSASMLASLTDSFADALASIVNFI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH AIRYAIVPADQEHRYGHGKAEPLASLAQSAFILGSAFLLFFHGGERLINPVEVKHATLGV HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHEECCHHHCCHHHHHHHHHHH IVSVIAIVLTFALVMLQKRALAATSSTVVEADSLHYKSDLFLNAAVLLALILSQYGWWWA HHHHHHHHHHHHHHHHHHHHHHHHCHHHEEHHCCHHHHHHHHHHHHHHHHHHHHCCHHHH DGLFAVLIALFIGQQAIGLAYRSVQSLLDRELDDETREKIAEIAKYDPQVRGIHDLRTRE HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHCC SGKTMFIQFHLELDGDLSLHEAHKIAVETSERVRQEFVDSEVIIHQDPV CCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA