| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963683
Identifier: 157963683
GI number: 157963683
Start: 4717313
End: 4718572
Strand: Reverse
Name: 157963683
Synonym: Spea_3872
Alternate gene names: NA
Gene position: 4718572-4717313 (Counterclockwise)
Preceding gene: 157963685
Following gene: 157963682
Centisome position: 91.19
GC content: 48.57
Gene sequence:
>1260_bases ATGAACAAGCTAATCATTAATGCGAATGTTTTTAACGGCACAGACAATGCGCTAATAGAGAACGTCTCAATTCTTATCGA AGATAACTTAATCGTTAAAATTGGTGAGATAGATCAATCCGTTGCAGACCAAGTTATCGATGCTAAAGGCGGCACTGTAA TGCCAGGGCTTATTGATGCGCACGTTCATATCACCCTGTCGGCGCCTTTCAATGTTATCGACACCATGACCCGTGAAGAG GTGGCTATTCGCTCTGCACGAATTTCAGAAGAGATGTTAATGCGCGGCTTTACTACCGTTCGTGACGTCGCGGGTAATAC CTTAGGTCTTAAAAAGAGTATCGATAACGGTTACGCAAAGGGCCCGCGCATCTTGCCGTCTATGGCGGCCGTTTCTCAAA CAAGCGGACATTCAGACTATCGCCAAAACCAAGCGCAAGAAAGAATTGGCCAACATGAAGACTCGCCTATGATGAAACTG GGGGCGATGAAGGTGGCCGATGGCCGTGCCGAGGTATTAAAAGCGGTACGTGAGCAACTGTTTATGGGGGCATCGCAAAT CAAGATCATGGCAGGTGGCGGCGCGTCATCAACCTTCGACCCGCTCGATACGCTGCAGTTTACCCTAGATGAGATGAAGG CCGCTGTGGAGGTGGCTACAGATTACGGCACTTATGTTGCGGCGCATATCCATACTGCAGACGCAATGCGCCGAGCCGCT GAGGCGGGAGTCATGTCGTTTGAGCATGCCACCATTATGGACGATGACATTGCTAAAACGATTAAAGATAAAGGGATTTG GGTGATCCCATCTTACTTTACCTCGTCCTTGATCGCAGAGCGTAAGATCCCGCTGCCAAATGAAGAGACCTATCGTAAAA CCGAGCGTGTGGGTAAGGCGATGCTAAAGTCAGCTGAGTTAATCAAGAAGTATCAGATCGACAATATTGCCTTTGGTACC GACTGCGTAGGCGAAACGAATGTGCATGCAACGCAGCTCAACGAGCTTGCTGCCATTGAGCAAACCTTTGACACGATTAC CGCGCTACGTATGGTGACCTCAAACTGTGGGCGATTATTTGAAATGTCGACCTATCAGCATCCGTATCTGGAGGGCCGTT TAGGTCAAGTGGTTGAAGGTGCCTATGCCGATCTGCTCATTATCGATGGTAATCCATTTGAGGGAGTCGCCAGTGTCGCT GACACCAGTAAGCAAAAAGTGATTATGAAAGACGGCGTCATCTACAAAAACACGCTGTAA
Upstream 100 bases:
>100_bases TGTCACTAAATGGCCATTTATTTGAGAGGGCTGTTGGTAAGATTTGTTCATCAGTTAGATGAAATCATCTTAGTGAAGCA ATGCTACCGAGGAATTAAAC
Downstream 100 bases:
>100_bases TAGGAACTGTCATTGCGACTTAACGGCCTAAAAATGGCACTTAGTTCACACAACTAAGTGCCGTTTTTGTATCTGCAATA TAGCGCACTTTTGCAGGTGT
Product: amidohydrolase
Products: NA
Alternate protein names: Prolidase; Xaa-Pro Dipeptidase; Amidohydrolase Family Protein; Imidazolonepropionase; Amidohydrolase Family; Secreted Hydrolase; Xaa-Pro Dipeptidase Family; M38 Family Peptidase; Aryldialkylphosphatase Related Protein; Parathion Hydrolase; Amidohydrolase Domain Protein; Metal-Dependent Amidohydrolase; Amidohydrolase Imidazolonepropionase; Aryldialkylphosphatase; Metallo-Dependent Hydrolase; Amidase; Metal-Dependent Hydrolase; Pro-Hyp Dipeptidase; Exported Adenine Deaminase-Like Amidohydrolase; M38 Familypeptidase; Xaa-Arg/Lys Peptidase; Hydrolase; Amidohydrolase Domain-Containing Protein; X-Pro Dipeptidase
Number of amino acids: Translated: 419; Mature: 419
Protein sequence:
>419_residues MNKLIINANVFNGTDNALIENVSILIEDNLIVKIGEIDQSVADQVIDAKGGTVMPGLIDAHVHITLSAPFNVIDTMTREE VAIRSARISEEMLMRGFTTVRDVAGNTLGLKKSIDNGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGQHEDSPMMKL GAMKVADGRAEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEVATDYGTYVAAHIHTADAMRRAA EAGVMSFEHATIMDDDIAKTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIAFGT DCVGETNVHATQLNELAAIEQTFDTITALRMVTSNCGRLFEMSTYQHPYLEGRLGQVVEGAYADLLIIDGNPFEGVASVA DTSKQKVIMKDGVIYKNTL
Sequences:
>Translated_419_residues MNKLIINANVFNGTDNALIENVSILIEDNLIVKIGEIDQSVADQVIDAKGGTVMPGLIDAHVHITLSAPFNVIDTMTREE VAIRSARISEEMLMRGFTTVRDVAGNTLGLKKSIDNGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGQHEDSPMMKL GAMKVADGRAEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEVATDYGTYVAAHIHTADAMRRAA EAGVMSFEHATIMDDDIAKTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIAFGT DCVGETNVHATQLNELAAIEQTFDTITALRMVTSNCGRLFEMSTYQHPYLEGRLGQVVEGAYADLLIIDGNPFEGVASVA DTSKQKVIMKDGVIYKNTL >Mature_419_residues MNKLIINANVFNGTDNALIENVSILIEDNLIVKIGEIDQSVADQVIDAKGGTVMPGLIDAHVHITLSAPFNVIDTMTREE VAIRSARISEEMLMRGFTTVRDVAGNTLGLKKSIDNGYAKGPRILPSMAAVSQTSGHSDYRQNQAQERIGQHEDSPMMKL GAMKVADGRAEVLKAVREQLFMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEVATDYGTYVAAHIHTADAMRRAA EAGVMSFEHATIMDDDIAKTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKAMLKSAELIKKYQIDNIAFGT DCVGETNVHATQLNELAAIEQTFDTITALRMVTSNCGRLFEMSTYQHPYLEGRLGQVVEGAYADLLIIDGNPFEGVASVA DTSKQKVIMKDGVIYKNTL
Specific function: Unknown
COG id: COG1228
COG function: function code Q; Imidazolonepropionase and related amidohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6322248, Length=344, Percent_Identity=33.1395348837209, Blast_Score=157, Evalue=3e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45729; Mature: 45729
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKLIINANVFNGTDNALIENVSILIEDNLIVKIGEIDQSVADQVIDAKGGTVMPGLIDA CCEEEEEEEEECCCCHHHHHCEEEEEECCEEEEECCCCHHHHHHHHHCCCCEECCCEEEE HVHITLSAPFNVIDTMTREEVAIRSARISEEMLMRGFTTVRDVAGNTLGLKKSIDNGYAK EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC GPRILPSMAAVSQTSGHSDYRQNQAQERIGQHEDSPMMKLGAMKVADGRAEVLKAVREQL CCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEECCCHHHHHHHHHHHH FMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEVATDYGTYVAAHIHTADAMRRAA HCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHH EAGVMSFEHATIMDDDIAKTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKA HHCCCEECCCEECCHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH MLKSAELIKKYQIDNIAFGTDCVGETNVHATQLNELAAIEQTFDTITALRMVTSNCGRLF HHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE EMSTYQHPYLEGRLGQVVEGAYADLLIIDGNPFEGVASVADTSKQKVIMKDGVIYKNTL ECCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCCEEEEECCEEEECCC >Mature Secondary Structure MNKLIINANVFNGTDNALIENVSILIEDNLIVKIGEIDQSVADQVIDAKGGTVMPGLIDA CCEEEEEEEEECCCCHHHHHCEEEEEECCEEEEECCCCHHHHHHHHHCCCCEECCCEEEE HVHITLSAPFNVIDTMTREEVAIRSARISEEMLMRGFTTVRDVAGNTLGLKKSIDNGYAK EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCC GPRILPSMAAVSQTSGHSDYRQNQAQERIGQHEDSPMMKLGAMKVADGRAEVLKAVREQL CCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCEEECCCHHHHHHHHHHHH FMGASQIKIMAGGGASSTFDPLDTLQFTLDEMKAAVEVATDYGTYVAAHIHTADAMRRAA HCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHH EAGVMSFEHATIMDDDIAKTIKDKGIWVIPSYFTSSLIAERKIPLPNEETYRKTERVGKA HHCCCEECCCEECCHHHHHHHHHCCEEEEHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH MLKSAELIKKYQIDNIAFGTDCVGETNVHATQLNELAAIEQTFDTITALRMVTSNCGRLF HHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE EMSTYQHPYLEGRLGQVVEGAYADLLIIDGNPFEGVASVADTSKQKVIMKDGVIYKNTL ECCCCCCCCCCCHHHHHHCCCCCCEEEECCCCCCHHHHHHCCCCCEEEEECCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA