| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is yeiJ [C]
Identifier: 157963662
GI number: 157963662
Start: 4678747
End: 4680015
Strand: Direct
Name: yeiJ [C]
Synonym: Spea_3851
Alternate gene names: 157963662
Gene position: 4678747-4680015 (Clockwise)
Preceding gene: 157963661
Following gene: 157963668
Centisome position: 90.42
GC content: 47.75
Gene sequence:
>1269_bases ATGCAAATTTTAATCAGTATTGTTGGCATCATCGCCCTGCTTGCAGTGGCCTTTCTTGCGTCTGAAAATCGTAAAGCCAT TAATTACCGCACAGTCGGAATGGCGTTTTTACTGCAGTTAATCATGGGTGCATTTGTCATCTATTCATCGTTTGGCCAAG CCGTTATTTTTAATATGGCAGAAGCGGTTTCGACCGTGATTGGCTACAGCAACGAAGGCATGTCGTTTATGTTTGGCGGC CTTGTTAGCGATAAGATGTATGAACTGTTTGGCCCAGGCGGCTTCGTTATCGCCTTTAAAGTTCTACCAATTATCGTGTT TTTCTCGGCGATTTCGGCGGTGCTGTACTATCTCGGAATTATGCAATGGGTGGTTCGTATTGTGGGCGGCGCACTGCAAA AAATCCTTAATACCAGCAAAGCGGAATCTATGTCTGCCAGTGCCAACATCTTCTTAGGTGTGACGGAAGCGCCACTGCTG ATTAAGCCTTATATTCCTAAGATGAGCCGTGCTGAATTGTTTGCGGTAATGTGTGGTGGTTTGGCGTCAATTGCAGGCAC CATGCTAGCGGGTTATGCCCAGCTAGGCATTAAGATGGAATATCTATTAGCAGCCTCGTTTATGGCGGCGCCGGGCGGTT TACTGTTTGCTAAGTTATTGATCCCGCAAACCGAGAAAGTAAACGATCAAGACCTAACAGTTGTAGAAGAGAACCCACCA GCCAACATTATTGATGCTGCCACAACTGGCACCATGAACGGCCTGTCACTGGCCATGGCTGTGGGCGCTATGCTGTTTGC TTTTGTCAGCTTAGTCGCGCTAATGAATGGCATGCTAGGTGGCATTGGCAACTGGTTTGGCTTTGACGGTCTAAGCTTAC AGCTGATCCTTGGCTACCTGTTTGCCCCTATCGCTTGGCTAATGGGTGTGGCTTGGGATGAAGCGCTGTTAGCAGGCTCG TTCATCGGCCAGAAGATAGTGATCAACGAGTTCTTTGCATATATCAACTTGGCACCTTACCTAAGTGGTGATGCGATTGT TGAGGCAACAGGCATGCCTATGTCTGAGCGTACGCAAGTGATTCTATCGTTTGCACTGTGTGGCTTTGCTAACTTAGGCA CGGTAGCGATTGCGATTGCCGGCATTGGTGGTTTAGTACCTGAGCGCCGCTCTGAAATTGCATCACTTGGCTTAAAAGCA CTGTTTGCAGGTATCTTGTCAAACCTAATGGCAGCAACCATTGCTGGCTTGTTTATGAGCCTGGCTTAA
Upstream 100 bases:
>100_bases CATTTAATGCTTAACCGCATTAAAAAGTAGGCAGAGCGTTAGCTAATACCTTTCTTTAACTTATTTAAGTTATTAACTTA TTTAGCAATAGACAAAATAA
Downstream 100 bases:
>100_bases GCAAGCAGCTTGTGATGCTGCAGCGCTCTGCATCATCTGGGTGATATTGACACCGCCTCGCTGTAGGCATAAAAATGGCC GCTATTAGCGGCCATTTTGT
Product: nucleoside transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 422; Mature: 422
Protein sequence:
>422_residues MQILISIVGIIALLAVAFLASENRKAINYRTVGMAFLLQLIMGAFVIYSSFGQAVIFNMAEAVSTVIGYSNEGMSFMFGG LVSDKMYELFGPGGFVIAFKVLPIIVFFSAISAVLYYLGIMQWVVRIVGGALQKILNTSKAESMSASANIFLGVTEAPLL IKPYIPKMSRAELFAVMCGGLASIAGTMLAGYAQLGIKMEYLLAASFMAAPGGLLFAKLLIPQTEKVNDQDLTVVEENPP ANIIDAATTGTMNGLSLAMAVGAMLFAFVSLVALMNGMLGGIGNWFGFDGLSLQLILGYLFAPIAWLMGVAWDEALLAGS FIGQKIVINEFFAYINLAPYLSGDAIVEATGMPMSERTQVILSFALCGFANLGTVAIAIAGIGGLVPERRSEIASLGLKA LFAGILSNLMAATIAGLFMSLA
Sequences:
>Translated_422_residues MQILISIVGIIALLAVAFLASENRKAINYRTVGMAFLLQLIMGAFVIYSSFGQAVIFNMAEAVSTVIGYSNEGMSFMFGG LVSDKMYELFGPGGFVIAFKVLPIIVFFSAISAVLYYLGIMQWVVRIVGGALQKILNTSKAESMSASANIFLGVTEAPLL IKPYIPKMSRAELFAVMCGGLASIAGTMLAGYAQLGIKMEYLLAASFMAAPGGLLFAKLLIPQTEKVNDQDLTVVEENPP ANIIDAATTGTMNGLSLAMAVGAMLFAFVSLVALMNGMLGGIGNWFGFDGLSLQLILGYLFAPIAWLMGVAWDEALLAGS FIGQKIVINEFFAYINLAPYLSGDAIVEATGMPMSERTQVILSFALCGFANLGTVAIAIAGIGGLVPERRSEIASLGLKA LFAGILSNLMAATIAGLFMSLA >Mature_422_residues MQILISIVGIIALLAVAFLASENRKAINYRTVGMAFLLQLIMGAFVIYSSFGQAVIFNMAEAVSTVIGYSNEGMSFMFGG LVSDKMYELFGPGGFVIAFKVLPIIVFFSAISAVLYYLGIMQWVVRIVGGALQKILNTSKAESMSASANIFLGVTEAPLL IKPYIPKMSRAELFAVMCGGLASIAGTMLAGYAQLGIKMEYLLAASFMAAPGGLLFAKLLIPQTEKVNDQDLTVVEENPP ANIIDAATTGTMNGLSLAMAVGAMLFAFVSLVALMNGMLGGIGNWFGFDGLSLQLILGYLFAPIAWLMGVAWDEALLAGS FIGQKIVINEFFAYINLAPYLSGDAIVEATGMPMSERTQVILSFALCGFANLGTVAIAIAGIGGLVPERRSEIASLGLKA LFAGILSNLMAATIAGLFMSLA
Specific function: Unknown
COG id: COG1972
COG function: function code F; Nucleoside permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family [H]
Homologues:
Organism=Homo sapiens, GI227116277, Length=424, Percent_Identity=36.5566037735849, Blast_Score=278, Evalue=5e-75, Organism=Homo sapiens, GI11545853, Length=427, Percent_Identity=36.768149882904, Blast_Score=278, Evalue=8e-75, Organism=Homo sapiens, GI42542381, Length=422, Percent_Identity=36.9668246445498, Blast_Score=274, Evalue=1e-73, Organism=Escherichia coli, GI1788485, Length=424, Percent_Identity=49.5283018867925, Blast_Score=380, Evalue=1e-107, Organism=Escherichia coli, GI1788488, Length=424, Percent_Identity=49.5283018867925, Blast_Score=369, Evalue=1e-103, Organism=Escherichia coli, GI1788737, Length=411, Percent_Identity=27.7372262773723, Blast_Score=165, Evalue=5e-42, Organism=Caenorhabditis elegans, GI71991794, Length=405, Percent_Identity=32.5925925925926, Blast_Score=214, Evalue=6e-56, Organism=Caenorhabditis elegans, GI17560276, Length=404, Percent_Identity=31.1881188118812, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI25146537, Length=206, Percent_Identity=33.495145631068, Blast_Score=113, Evalue=2e-25, Organism=Drosophila melanogaster, GI45552519, Length=420, Percent_Identity=34.2857142857143, Blast_Score=265, Evalue=5e-71, Organism=Drosophila melanogaster, GI45552517, Length=420, Percent_Identity=34.2857142857143, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI19921868, Length=420, Percent_Identity=34.2857142857143, Blast_Score=265, Evalue=6e-71, Organism=Drosophila melanogaster, GI281360430, Length=417, Percent_Identity=33.0935251798561, Blast_Score=236, Evalue=3e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008276 - InterPro: IPR018270 - InterPro: IPR011642 - InterPro: IPR011657 - InterPro: IPR002668 [H]
Pfam domain/function: PF07670 Gate; PF07662 Nucleos_tra2_C; PF01773 Nucleos_tra2_N [H]
EC number: NA
Molecular weight: Translated: 44496; Mature: 44496
Theoretical pI: Translated: 4.64; Mature: 4.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 5.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQILISIVGIIALLAVAFLASENRKAINYRTVGMAFLLQLIMGAFVIYSSFGQAVIFNMA CHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVSTVIGYSNEGMSFMFGGLVSDKMYELFGPGGFVIAFKVLPIIVFFSAISAVLYYLGI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MQWVVRIVGGALQKILNTSKAESMSASANIFLGVTEAPLLIKPYIPKMSRAELFAVMCGG HHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHH LASIAGTMLAGYAQLGIKMEYLLAASFMAAPGGLLFAKLLIPQTEKVNDQDLTVVEENPP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECCCC ANIIDAATTGTMNGLSLAMAVGAMLFAFVSLVALMNGMLGGIGNWFGFDGLSLQLILGYL CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHH FAPIAWLMGVAWDEALLAGSFIGQKIVINEFFAYINLAPYLSGDAIVEATGMPMSERTQV HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHH ILSFALCGFANLGTVAIAIAGIGGLVPERRSEIASLGLKALFAGILSNLMAATIAGLFMS HHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LA CC >Mature Secondary Structure MQILISIVGIIALLAVAFLASENRKAINYRTVGMAFLLQLIMGAFVIYSSFGQAVIFNMA CHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAVSTVIGYSNEGMSFMFGGLVSDKMYELFGPGGFVIAFKVLPIIVFFSAISAVLYYLGI HHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH MQWVVRIVGGALQKILNTSKAESMSASANIFLGVTEAPLLIKPYIPKMSRAELFAVMCGG HHHHHHHHHHHHHHHHCCHHHHHCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHH LASIAGTMLAGYAQLGIKMEYLLAASFMAAPGGLLFAKLLIPQTEKVNDQDLTVVEENPP HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEECCCC ANIIDAATTGTMNGLSLAMAVGAMLFAFVSLVALMNGMLGGIGNWFGFDGLSLQLILGYL CCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHHHHHHHHH FAPIAWLMGVAWDEALLAGSFIGQKIVINEFFAYINLAPYLSGDAIVEATGMPMSERTQV HHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHH ILSFALCGFANLGTVAIAIAGIGGLVPERRSEIASLGLKALFAGILSNLMAATIAGLFMS HHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LA CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]