| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is tatB [H]
Identifier: 157963608
GI number: 157963608
Start: 4610534
End: 4610929
Strand: Direct
Name: tatB [H]
Synonym: Spea_3796
Alternate gene names: 157963608
Gene position: 4610534-4610929 (Clockwise)
Preceding gene: 157963607
Following gene: 157963609
Centisome position: 89.1
GC content: 44.19
Gene sequence:
>396_bases ATGTTCGACGGTATCGGCTTTATGGAGTTGCTGCTGATTGGGATCTTGGGCCTAGTAGTACTTGGCCCAGAAAGACTTCC AACGGCTGTGCGCTCAATTTCTAGCTGGATCCGCGCCATGAAAAAAATGGCTAACTCGGTAAAAGACGAATTAGAGCAAG AGCTTAAAATTGAGCAACTGCACTCTGATTTGAAAAATGCAGAGAGTCAGGGTTTAAAGAACCTTTCTCCAGAGTTACAG GATTCAATCGATCAATTAAAAGAAGCGGCTCAATCTGTTAATCGTCCTTATCAAGTAGAAGACGTGCCTGCGGCGAAAGA AACTCCTGCCAAAGAAACACCAACTGCTGAAAAAAGTACGACTACAGGTGCTAATTCAGACAAACCTAACGGGTAG
Upstream 100 bases:
>100_bases GCCAGCTGCTGACACTGCTAAAGTGACAGAAACTGCAAAAGTTGCTGAGACAGCCGAGAAAAAGGCTGAGTCTAAAGGTA AAGAACAGGCGTAATCGACT
Downstream 100 bases:
>100_bases TCCATGTCACAACAGCAGCCATTAATCAGCCATCTGCTCGAGTTGCGCACTAAGTTACTGCGGGCAATTGGCAGTGTTCT TTTGGTGTTTATTTGCTTGG
Product: twin-arginine translocation protein, TatB subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MFDGIGFMELLLIGILGLVVLGPERLPTAVRSISSWIRAMKKMANSVKDELEQELKIEQLHSDLKNAESQGLKNLSPELQ DSIDQLKEAAQSVNRPYQVEDVPAAKETPAKETPTAEKSTTTGANSDKPNG
Sequences:
>Translated_131_residues MFDGIGFMELLLIGILGLVVLGPERLPTAVRSISSWIRAMKKMANSVKDELEQELKIEQLHSDLKNAESQGLKNLSPELQ DSIDQLKEAAQSVNRPYQVEDVPAAKETPAKETPTAEKSTTTGANSDKPNG >Mature_131_residues MFDGIGFMELLLIGILGLVVLGPERLPTAVRSISSWIRAMKKMANSVKDELEQELKIEQLHSDLKNAESQGLKNLSPELQ DSIDQLKEAAQSVNRPYQVEDVPAAKETPAKETPTAEKSTTTGANSDKPNG
Specific function: Required for correct localization of precursor proteins bearing signal peptides with the twin arginine conserved motif S/T-R-R-X-F-L-K. This sec-independent pathway is termed TAT for twin-arginine translocation system. This system mainly transports protei
COG id: COG1826
COG function: function code U; Sec-independent protein secretion pathway components
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tatB family [H]
Homologues:
Organism=Escherichia coli, GI48994984, Length=101, Percent_Identity=52.4752475247525, Blast_Score=117, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003369 - InterPro: IPR018448 - InterPro: IPR003998 [H]
Pfam domain/function: PF02416 MttA_Hcf106 [H]
EC number: NA
Molecular weight: Translated: 14288; Mature: 14288
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDGIGFMELLLIGILGLVVLGPERLPTAVRSISSWIRAMKKMANSVKDELEQELKIEQL CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSDLKNAESQGLKNLSPELQDSIDQLKEAAQSVNRPYQVEDVPAAKETPAKETPTAEKST HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTGANSDKPNG CCCCCCCCCCC >Mature Secondary Structure MFDGIGFMELLLIGILGLVVLGPERLPTAVRSISSWIRAMKKMANSVKDELEQELKIEQL CCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HSDLKNAESQGLKNLSPELQDSIDQLKEAAQSVNRPYQVEDVPAAKETPAKETPTAEKST HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC TTGANSDKPNG CCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA