| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963600
Identifier: 157963600
GI number: 157963600
Start: 4603988
End: 4604497
Strand: Reverse
Name: 157963600
Synonym: Spea_3788
Alternate gene names: NA
Gene position: 4604497-4603988 (Counterclockwise)
Preceding gene: 157963601
Following gene: 157963599
Centisome position: 88.98
GC content: 47.45
Gene sequence:
>510_bases ATGACTTCAATAACGTCGTTTGACAGAAAGCTCTACTACTATGTAGTGCAAAAAGGCCAAGAGCACGGACTGCAGAAGCT GGCATTAAAGTTATCTGCATCGGGCAATGGCCCTGTGTACTTATATTTAGCGGTGGCGTGTCTCATCATAGATAGTCGAG GCGAAGCGTTATTAAACGCTCTGGTTGCTGCATACCTTGTTGAGCTCCCATTGTATTTTGCGCTTAAGAATATGATCCGC CGTCCGCGGCCATGTCATGCCCTGAGTGATGGAATTGCCAGTTTCGAGCCTGCCGACAAGTTTAGCCTTCCGTCCGGTCA TACTGCGGCGGCTTTTGTTATGGCAACCAGTATCTACCTAGTTTACCCGCAATTGTTTTATATCGCGGTAGCTTGGGCAG TAGCGATTGGCTTAGCTCGTATAGTGCTCGGCGTTCACTACCCAATGGATATAGTTGCCGGCGCAATTCTTGGGATTGTT TCTGTATTATTGAGCCAACAATTCATCTAG
Upstream 100 bases:
>100_bases TCGCATAAATTCAGTGTCATAAAACTATATATAGGCTGTCACTGTCGTGTCATAGAGTTTTCATAGCTTCCTATCATAAG AACAGATAGAGGCGGGAATA
Downstream 100 bases:
>100_bases GAGGCCGTTTGCGAATTCTTTATGGTGTTCAAGGGACTGGTAATGGTCACTTAAGTCGTGCTCGAGTCATGGTAAAAGCG CTGCAGCGACAAGGCGTCGA
Product: PA-phosphatase-like phosphoesterase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 169; Mature: 168
Protein sequence:
>169_residues MTSITSFDRKLYYYVVQKGQEHGLQKLALKLSASGNGPVYLYLAVACLIIDSRGEALLNALVAAYLVELPLYFALKNMIR RPRPCHALSDGIASFEPADKFSLPSGHTAAAFVMATSIYLVYPQLFYIAVAWAVAIGLARIVLGVHYPMDIVAGAILGIV SVLLSQQFI
Sequences:
>Translated_169_residues MTSITSFDRKLYYYVVQKGQEHGLQKLALKLSASGNGPVYLYLAVACLIIDSRGEALLNALVAAYLVELPLYFALKNMIR RPRPCHALSDGIASFEPADKFSLPSGHTAAAFVMATSIYLVYPQLFYIAVAWAVAIGLARIVLGVHYPMDIVAGAILGIV SVLLSQQFI >Mature_168_residues TSITSFDRKLYYYVVQKGQEHGLQKLALKLSASGNGPVYLYLAVACLIIDSRGEALLNALVAAYLVELPLYFALKNMIRR PRPCHALSDGIASFEPADKFSLPSGHTAAAFVMATSIYLVYPQLFYIAVAWAVAIGLARIVLGVHYPMDIVAGAILGIVS VLLSQQFI
Specific function: Unknown
COG id: COG0671
COG function: function code I; Membrane-associated phospholipid phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016118 - InterPro: IPR000326 - InterPro: IPR015414 [H]
Pfam domain/function: PF01569 PAP2; PF09335 SNARE_assoc [H]
EC number: NA
Molecular weight: Translated: 18381; Mature: 18250
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSITSFDRKLYYYVVQKGQEHGLQKLALKLSASGNGPVYLYLAVACLIIDSRGEALLNA CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHH LVAAYLVELPLYFALKNMIRRPRPCHALSDGIASFEPADKFSLPSGHTAAAFVMATSIYL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VYPQLFYIAVAWAVAIGLARIVLGVHYPMDIVAGAILGIVSVLLSQQFI HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TSITSFDRKLYYYVVQKGQEHGLQKLALKLSASGNGPVYLYLAVACLIIDSRGEALLNA CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHH LVAAYLVELPLYFALKNMIRRPRPCHALSDGIASFEPADKFSLPSGHTAAAFVMATSIYL HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH VYPQLFYIAVAWAVAIGLARIVLGVHYPMDIVAGAILGIVSVLLSQQFI HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]