| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963582
Identifier: 157963582
GI number: 157963582
Start: 4583926
End: 4584582
Strand: Reverse
Name: 157963582
Synonym: Spea_3770
Alternate gene names: NA
Gene position: 4584582-4583926 (Counterclockwise)
Preceding gene: 157963583
Following gene: 157963581
Centisome position: 88.6
GC content: 41.86
Gene sequence:
>657_bases ATGAAACAACAATGGAATTTAGTCGCTGAGAAATTTGACGGCTTAAGTCAGCGTGAGAGAGTCTTAGTGGCAGTTGCTGC GCTGATTGTTGCTGGCTTATTGTTTTATCTACCGCTCGAGTCGGTTTTAAAGCAGCACGGTAAACTCAGTGAGCAAATCC GAGCGATTGAAAGTGAAAACAGGATCTCTGAACAGCAAATACAGCTGTATGAAGAAAGCTTTCGAAAAGATCCTGATGAT GATTACCGTCAGCGTTTAAACAATATTAACCAGCAGAATAAAGCTATCGATGAACAACTGGCTTTTCAGATGGTCGATAT GGTCCCAGCCGATCATATGCCGACGCTGTTAGCGGGACTGCTTTCAAAGATTAAAGGCATTAAGCTGAAATCCTTTACTT CAATAGCCCCCACTCCGTTATTAGAGGTGGGTGACGATAAGAAGGTTAACTTATACAGCCACGGTATTCGTCTCGAATTT GTTGGGGATTACTTTGCGGTACTGAGGTTTATTGAAGCGGTTGAGAATATGCCTAACAAACTGTATTGGCGCAGCATGGA CTATCAAGTCGATACCTATCCTAAGGCCTCTGTTTCATTAGAACTTTATACTTTGAGTATTAATAAGGACTTTATCAGTG TTGCCGAAAAAGAGTAG
Upstream 100 bases:
>100_bases GTCACGCTTTTGCAACTATGACGATGAATTTAGGTGAAAACCAGCCGCTTGCTTTTAAGCTGACAAGCGATGCGACTCCT ACGGGTAAGGAGTTGATTAA
Downstream 100 bases:
>100_bases TGCGCTATTGATTGCGTTCCTGTGCAGTACTTTAGGTTTAAACCTTAATGCTGCTACGCTGCGGGATCCGACTAAGCCAG GTTATTCATCAGGAAAATCA
Product: MSHA biogenesis protein MshJ
Products: NA
Alternate protein names: Glucose-6-Phosphate Isomerase; Msha Biogenesis Protein Mshj; MshA Biogenesis Protein MshJ-Like Protein; MshA Biogenesis Protein MshJ-Like; Type IV Pilus Mannose-Sensitive Hemagglutinin D
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MKQQWNLVAEKFDGLSQRERVLVAVAALIVAGLLFYLPLESVLKQHGKLSEQIRAIESENRISEQQIQLYEESFRKDPDD DYRQRLNNINQQNKAIDEQLAFQMVDMVPADHMPTLLAGLLSKIKGIKLKSFTSIAPTPLLEVGDDKKVNLYSHGIRLEF VGDYFAVLRFIEAVENMPNKLYWRSMDYQVDTYPKASVSLELYTLSINKDFISVAEKE
Sequences:
>Translated_218_residues MKQQWNLVAEKFDGLSQRERVLVAVAALIVAGLLFYLPLESVLKQHGKLSEQIRAIESENRISEQQIQLYEESFRKDPDD DYRQRLNNINQQNKAIDEQLAFQMVDMVPADHMPTLLAGLLSKIKGIKLKSFTSIAPTPLLEVGDDKKVNLYSHGIRLEF VGDYFAVLRFIEAVENMPNKLYWRSMDYQVDTYPKASVSLELYTLSINKDFISVAEKE >Mature_218_residues MKQQWNLVAEKFDGLSQRERVLVAVAALIVAGLLFYLPLESVLKQHGKLSEQIRAIESENRISEQQIQLYEESFRKDPDD DYRQRLNNINQQNKAIDEQLAFQMVDMVPADHMPTLLAGLLSKIKGIKLKSFTSIAPTPLLEVGDDKKVNLYSHGIRLEF VGDYFAVLRFIEAVENMPNKLYWRSMDYQVDTYPKASVSLELYTLSINKDFISVAEKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25073; Mature: 25073
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQQWNLVAEKFDGLSQRERVLVAVAALIVAGLLFYLPLESVLKQHGKLSEQIRAIESEN CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RISEQQIQLYEESFRKDPDDDYRQRLNNINQQNKAIDEQLAFQMVDMVPADHMPTLLAGL HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LSKIKGIKLKSFTSIAPTPLLEVGDDKKVNLYSHGIRLEFVGDYFAVLRFIEAVENMPNK HHHHCCCCCCCCCCCCCCCCEECCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHCCCHH LYWRSMDYQVDTYPKASVSLELYTLSINKDFISVAEKE HEEECCCCEECCCCCCEEEEEEEEEEECHHHHHHCCCC >Mature Secondary Structure MKQQWNLVAEKFDGLSQRERVLVAVAALIVAGLLFYLPLESVLKQHGKLSEQIRAIESEN CCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH RISEQQIQLYEESFRKDPDDDYRQRLNNINQQNKAIDEQLAFQMVDMVPADHMPTLLAGL HHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH LSKIKGIKLKSFTSIAPTPLLEVGDDKKVNLYSHGIRLEFVGDYFAVLRFIEAVENMPNK HHHHCCCCCCCCCCCCCCCCEECCCCCEEEEEECCEEEEEHHHHHHHHHHHHHHHCCCHH LYWRSMDYQVDTYPKASVSLELYTLSINKDFISVAEKE HEEECCCCEECCCCCCEEEEEEEEEEECHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA