| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963569
Identifier: 157963569
GI number: 157963569
Start: 4572114
End: 4573001
Strand: Reverse
Name: 157963569
Synonym: Spea_3757
Alternate gene names: NA
Gene position: 4573001-4572114 (Counterclockwise)
Preceding gene: 157963570
Following gene: 157963568
Centisome position: 88.37
GC content: 48.2
Gene sequence:
>888_bases ATGCAAGCGTTAATACGTCCCGCTTCTAGGTTGCCATCGAGAAAGCTTAAACAGCTGAGAGGTCGAGGCTTTACCTTGGT TGAGATGGTCACCGTCATTATCATTCTTGGAGTATTGGTGCTTGGGGTCAGCAGCTTTCTAATTTTTGGTACGCGCATCT TTATCGATGCAACCTCAGTAGACAAAGTGATGAGTCAGAGTCGCTTTGCTATTGAGCGTATGACTCGAGAGCTGCGTAAC GCGGTGCCGAACAGCATCCGTGTGCGTGATAGCGGTGACGGCGCTTGGCAGTGCGTGGAGATGATGCCGATCATCTCAAG TGCTTCTTATATGGATATGCCTATAGCGCCAGATCCTGCCTCACAATTTGGTAGCTTGATGCAGTCGAGTGCCGCAGCCC CCTTGACGGCAGATCAATTTTTACTGATTTATCCACTCAGCCCTGCAGATGTTTATACCTCAACAGCTGGCACGCAAGGC AAGCTGTTTAGTATTGATTCCGTTACTGCAGATAATTTAAAGAATGACATTAGTATCGATTTTGGCCGTGCGGTGCGTTT CGATGAAGCTTCGCCAAGACAGCGCTACTTTGGTGTTCAAAGCGCGGTGAGCTACTGTTTCGAGCAAGTAACCCCTGAGT TGAGTTTATTAAAACGTTACGCGGATTATGGCTTTAATCACCCGAATCTACAGCCTGCGCCAGCCGATATGGGCACAGGG GTGCTGATGGCCGAGAATGTGGTAAATACTATCGGTAGCAATAGCCCTATGGCGTATACCCCCGGAACTCTGCGCAATAA CGCCATGGTGCACCTAAACCCTTTATTTGATGTGCAAGGGCAGAGTTTTCAATATCATCATCAAGTGCAGGTGATTAATG TCCCTTAA
Upstream 100 bases:
>100_bases ACAACAACCTACCGAGTTTAGACACTAAGTTGATTACTATCGATGTTACCACGCCTAACGGCGAGGTGATGACCTTCAAT GCGATCCGGAGTAACTATTA
Downstream 100 bases:
>100_bases CCGAATGCTTTGTCGTAATAGTCAGTTCAGTAATATAGTCTCTCGTTCCAAGCAAACGGGAAGTGCCTTGGTAATCGGTG TGTTCATTATTACCGTGATG
Product: methylation site containing protein
Products: NA
Alternate protein names: Methylation Site Containing Protein; Msha Biogenesis Protein Msho; Mannose-Sensitive Agglutinin; Prepilin-Type Cleavage/Methylation; Tfp Pilus Assembly Protein PilW; Tfp-Like Pilus Assembly Protein; General Secretion Pathway Protein H; MshO Protein
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MQALIRPASRLPSRKLKQLRGRGFTLVEMVTVIIILGVLVLGVSSFLIFGTRIFIDATSVDKVMSQSRFAIERMTRELRN AVPNSIRVRDSGDGAWQCVEMMPIISSASYMDMPIAPDPASQFGSLMQSSAAAPLTADQFLLIYPLSPADVYTSTAGTQG KLFSIDSVTADNLKNDISIDFGRAVRFDEASPRQRYFGVQSAVSYCFEQVTPELSLLKRYADYGFNHPNLQPAPADMGTG VLMAENVVNTIGSNSPMAYTPGTLRNNAMVHLNPLFDVQGQSFQYHHQVQVINVP
Sequences:
>Translated_295_residues MQALIRPASRLPSRKLKQLRGRGFTLVEMVTVIIILGVLVLGVSSFLIFGTRIFIDATSVDKVMSQSRFAIERMTRELRN AVPNSIRVRDSGDGAWQCVEMMPIISSASYMDMPIAPDPASQFGSLMQSSAAAPLTADQFLLIYPLSPADVYTSTAGTQG KLFSIDSVTADNLKNDISIDFGRAVRFDEASPRQRYFGVQSAVSYCFEQVTPELSLLKRYADYGFNHPNLQPAPADMGTG VLMAENVVNTIGSNSPMAYTPGTLRNNAMVHLNPLFDVQGQSFQYHHQVQVINVP >Mature_295_residues MQALIRPASRLPSRKLKQLRGRGFTLVEMVTVIIILGVLVLGVSSFLIFGTRIFIDATSVDKVMSQSRFAIERMTRELRN AVPNSIRVRDSGDGAWQCVEMMPIISSASYMDMPIAPDPASQFGSLMQSSAAAPLTADQFLLIYPLSPADVYTSTAGTQG KLFSIDSVTADNLKNDISIDFGRAVRFDEASPRQRYFGVQSAVSYCFEQVTPELSLLKRYADYGFNHPNLQPAPADMGTG VLMAENVVNTIGSNSPMAYTPGTLRNNAMVHLNPLFDVQGQSFQYHHQVQVINVP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32406; Mature: 32406
Theoretical pI: Translated: 7.56; Mature: 7.56
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQALIRPASRLPSRKLKQLRGRGFTLVEMVTVIIILGVLVLGVSSFLIFGTRIFIDATSV CCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHH DKVMSQSRFAIERMTRELRNAVPNSIRVRDSGDGAWQCVEMMPIISSASYMDMPIAPDPA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCH SQFGSLMQSSAAAPLTADQFLLIYPLSPADVYTSTAGTQGKLFSIDSVTADNLKNDISID HHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCEEEECCCCHHCCCCCCEEE FGRAVRFDEASPRQRYFGVQSAVSYCFEQVTPELSLLKRYADYGFNHPNLQPAPADMGTG CCCEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC VLMAENVVNTIGSNSPMAYTPGTLRNNAMVHLNPLFDVQGQSFQYHHQVQVINVP HHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECEECCCCCCEEEEEEEEEEECC >Mature Secondary Structure MQALIRPASRLPSRKLKQLRGRGFTLVEMVTVIIILGVLVLGVSSFLIFGTRIFIDATSV CCCCCCCHHHCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHH DKVMSQSRFAIERMTRELRNAVPNSIRVRDSGDGAWQCVEMMPIISSASYMDMPIAPDPA HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCH SQFGSLMQSSAAAPLTADQFLLIYPLSPADVYTSTAGTQGKLFSIDSVTADNLKNDISID HHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHCCCCCCCCCEEEECCCCHHCCCCCCEEE FGRAVRFDEASPRQRYFGVQSAVSYCFEQVTPELSLLKRYADYGFNHPNLQPAPADMGTG CCCEEECCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC VLMAENVVNTIGSNSPMAYTPGTLRNNAMVHLNPLFDVQGQSFQYHHQVQVINVP HHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEECEECCCCCCEEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA