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The map label for this gene is yhdE [C]

Identifier: 157963563

GI number: 157963563

Start: 4564171

End: 4564767

Strand: Reverse

Name: yhdE [C]

Synonym: Spea_3751

Alternate gene names: 157963563

Gene position: 4564767-4564171 (Counterclockwise)

Preceding gene: 157963564

Following gene: 157963562

Centisome position: 88.22

GC content: 47.74

Gene sequence:

>597_bases
ATGCAGTTAGTACTCGCTTCGGGCTCGCCTCGTCGTAAAGAGTTGTTAGGTCAGTTAGCTTTTTTAAATACTAATAGTGC
CACACCATTCGAGTTTGATATTTTGGCAGCCGATATTGATGAGAGTCATCAAGTTGGTGAGTCAGCTGAAGAATTTGTAC
TGCGATTAGCGCAGGAAAAAGCCATGGCAGGTCTAGCCTTATACGGTACCGGTAAACAAGCCGTGGTGTTAGGCTCTGAT
ACTATCGTGGTGCTAGGCGAGACCATTTTGGGTAAGCCTACCGATGAGGCTAATGCCGCCGAGATCCTAGCAAACCTATC
GGGTAAAGCCCACGAGGTGATGACCGCCGTAGCCCTAACCGATGGTACTAAAACCGTAAGTCGATTGGTTAAAACTCGGG
TGCAGTTTAGTGCGCTAAGTGAGGCTGATATTTTGGCTTACATTGCCACGGGTGAGCCAATGGACAAGGCTGGTGCTTAC
GGAATCCAAGGTCTAGGTGGAAGTTTTGTTGAAGCTATCGAGGGAAGTTATTCCGCGGTAGTCGGGTTACCTTTGGTAGA
AACCCGTGCGTTATTGTGTGAGATGCAAGTTTTATAG

Upstream 100 bases:

>100_bases
CGCCTGTACAAGGTTAGATAGACGCCAGTTCTTTAGCTGAGCGATTCAGGTTAACCGTTGAATTGGTCTGCTTAGTTAGC
ATCATACAAAGGTACTCAAA

Downstream 100 bases:

>100_bases
TCATAAAAACAGTAATAACTAGGTCAGATTGGCCAAGCTATAGAACATCAATCATTGCAGACTTTAACTCGCTAGCTGGT
GTGTATTTTCCCAGTAGCAG

Product: maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MQLVLASGSPRRKELLGQLAFLNTNSATPFEFDILAADIDESHQVGESAEEFVLRLAQEKAMAGLALYGTGKQAVVLGSD
TIVVLGETILGKPTDEANAAEILANLSGKAHEVMTAVALTDGTKTVSRLVKTRVQFSALSEADILAYIATGEPMDKAGAY
GIQGLGGSFVEAIEGSYSAVVGLPLVETRALLCEMQVL

Sequences:

>Translated_198_residues
MQLVLASGSPRRKELLGQLAFLNTNSATPFEFDILAADIDESHQVGESAEEFVLRLAQEKAMAGLALYGTGKQAVVLGSD
TIVVLGETILGKPTDEANAAEILANLSGKAHEVMTAVALTDGTKTVSRLVKTRVQFSALSEADILAYIATGEPMDKAGAY
GIQGLGGSFVEAIEGSYSAVVGLPLVETRALLCEMQVL
>Mature_198_residues
MQLVLASGSPRRKELLGQLAFLNTNSATPFEFDILAADIDESHQVGESAEEFVLRLAQEKAMAGLALYGTGKQAVVLGSD
TIVVLGETILGKPTDEANAAEILANLSGKAHEVMTAVALTDGTKTVSRLVKTRVQFSALSEADILAYIATGEPMDKAGAY
GIQGLGGSFVEAIEGSYSAVVGLPLVETRALLCEMQVL

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family [H]

Homologues:

Organism=Homo sapiens, GI117553627, Length=197, Percent_Identity=38.0710659898477, Blast_Score=119, Evalue=2e-27,
Organism=Homo sapiens, GI291045181, Length=119, Percent_Identity=46.218487394958, Blast_Score=107, Evalue=5e-24,
Organism=Homo sapiens, GI310133124, Length=119, Percent_Identity=46.218487394958, Blast_Score=106, Evalue=1e-23,
Organism=Homo sapiens, GI291045183, Length=192, Percent_Identity=33.8541666666667, Blast_Score=104, Evalue=6e-23,
Organism=Escherichia coli, GI1789646, Length=196, Percent_Identity=53.0612244897959, Blast_Score=187, Evalue=5e-49,
Organism=Escherichia coli, GI87081830, Length=197, Percent_Identity=34.5177664974619, Blast_Score=96, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI193202443, Length=189, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=7e-20,
Organism=Drosophila melanogaster, GI78706856, Length=202, Percent_Identity=36.6336633663366, Blast_Score=119, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003697 [H]

Pfam domain/function: PF02545 Maf [H]

EC number: NA

Molecular weight: Translated: 20728; Mature: 20728

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLVLASGSPRRKELLGQLAFLNTNSATPFEFDILAADIDESHQVGESAEEFVLRLAQEK
CEEEECCCCCHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCHHCCCHHHHHHHHHHHHH
AMAGLALYGTGKQAVVLGSDTIVVLGETILGKPTDEANAAEILANLSGKAHEVMTAVALT
HHCCEEEEECCCEEEEECCCEEEEECCHHCCCCCCCCHHHHHHHHCCCCHHHHHHHEEEC
DGTKTVSRLVKTRVQFSALSEADILAYIATGEPMDKAGAYGIQGLGGSFVEAIEGSYSAV
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEE
VGLPLVETRALLCEMQVL
ECCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQLVLASGSPRRKELLGQLAFLNTNSATPFEFDILAADIDESHQVGESAEEFVLRLAQEK
CEEEECCCCCHHHHHHHHHHEEECCCCCCEEEEEEEECCCCCHHCCCHHHHHHHHHHHHH
AMAGLALYGTGKQAVVLGSDTIVVLGETILGKPTDEANAAEILANLSGKAHEVMTAVALT
HHCCEEEEECCCEEEEECCCEEEEECCHHCCCCCCCCHHHHHHHHCCCCHHHHHHHEEEC
DGTKTVSRLVKTRVQFSALSEADILAYIATGEPMDKAGAYGIQGLGGSFVEAIEGSYSAV
CCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHCCCCCEE
VGLPLVETRALLCEMQVL
ECCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA