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The map label for this gene is yjcR [C]

Identifier: 157963557

GI number: 157963557

Start: 4553394

End: 4554365

Strand: Reverse

Name: yjcR [C]

Synonym: Spea_3745

Alternate gene names: 157963557

Gene position: 4554365-4553394 (Counterclockwise)

Preceding gene: 157963558

Following gene: 157963556

Centisome position: 88.01

GC content: 51.13

Gene sequence:

>972_bases
ATGCGTACTAATCGCATCTTGGCAGCAGTGGCATTCATCGTTTTAATTGGCGCTTTGGTATATGGATTAATCTTGGCTTA
TTCACCTAAGCCACAATTGCTGCAGGGGCAGATCGAGGCGCGTGAGTACAACATCTCCTCAAAAGTTCCTGGTCGAGTCG
AAGAGGTTTTGGTTCGTCGCGGCGACAAGGTTAATGAAGGCGATCTGCTATATGCCATCTATAGCCCAGAACTTAAAGCT
AAATTGATGCAGGCAGAAGGCGGCCGTGATGCGGCGCTGGCAATGCAGCAGGAAGCGGATAATGGTGCACGTAAGCAGCA
GATAGCCGCCTCTAAAGAGCAATGGTTAAAAGCGCAGGCGGCGGCTAAGTTAGCACGCACCACCTTCGATCGCGTCGAAG
TGCTATTTAATGAAGGCGTGCTAGCAAGACAGAAGCGTGATGAAGCCTTTACTCAGTGGCAAGCGGCTAAGTATACCGAG
CAAGCTGCACTGGCCATGTATCAGATGGCAGATGAAGGCGCACGAGTGGAAACCAAGGCTGCAGCCGCCGGAAATGCGCG
TATGGCCGAAGGTGCCGTTAACGAAGTCTCTGCCATTCTTGCCGATAGTCAAATGCGCTCACCTAAAACTGGTGAGATCA
GCGAGGTACTGCTGCAGGCTGGCGAATTAGCACCAAGTGGCTTCCCGGTAGTCAGCTTAATCGATATGAATGATGCTTGG
GCGGTATTCCAAGTGCGCGAGGATCAGCTTAAAAAGTTCAAGCAAGGCGATGTACTTAAGTTGACTATCCCTGCACTCGA
GCGAGAAGTGGAGTTCACTGTGAGTCATATTGGCGTCATGGGTGAGTTTGCCACCTGGCGTGCCACAGAGAGCGGTCATG
ACTTCGATATGCGTACCTTCGAAGTTGAGCTGCGTCCCAATGAGACGATCAAAGATCTAAGAGTCGGCATGTCGATACTG
TTCACCCTTTAG

Upstream 100 bases:

>100_bases
GGGGCGCAATATCGATATGTACAAGCATACGCAAGACTGATGGCAATAAGCGGTCAGCTTGATGAATTTATAGGTAGAAG
TATTAAGCAAGGGGACACCA

Downstream 100 bases:

>100_bases
ACTGGGGATCACTCAGATGGGAGCTGGGCTTTGATTAAAGCGCTCAAGAGAGAGCTAGCTGCGCTGTTGGATGATCCATG
GCAGCTGGCGCTAATAAGCT

Product: secretion protein HlyD family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MRTNRILAAVAFIVLIGALVYGLILAYSPKPQLLQGQIEAREYNISSKVPGRVEEVLVRRGDKVNEGDLLYAIYSPELKA
KLMQAEGGRDAALAMQQEADNGARKQQIAASKEQWLKAQAAAKLARTTFDRVEVLFNEGVLARQKRDEAFTQWQAAKYTE
QAALAMYQMADEGARVETKAAAAGNARMAEGAVNEVSAILADSQMRSPKTGEISEVLLQAGELAPSGFPVVSLIDMNDAW
AVFQVREDQLKKFKQGDVLKLTIPALEREVEFTVSHIGVMGEFATWRATESGHDFDMRTFEVELRPNETIKDLRVGMSIL
FTL

Sequences:

>Translated_323_residues
MRTNRILAAVAFIVLIGALVYGLILAYSPKPQLLQGQIEAREYNISSKVPGRVEEVLVRRGDKVNEGDLLYAIYSPELKA
KLMQAEGGRDAALAMQQEADNGARKQQIAASKEQWLKAQAAAKLARTTFDRVEVLFNEGVLARQKRDEAFTQWQAAKYTE
QAALAMYQMADEGARVETKAAAAGNARMAEGAVNEVSAILADSQMRSPKTGEISEVLLQAGELAPSGFPVVSLIDMNDAW
AVFQVREDQLKKFKQGDVLKLTIPALEREVEFTVSHIGVMGEFATWRATESGHDFDMRTFEVELRPNETIKDLRVGMSIL
FTL
>Mature_323_residues
MRTNRILAAVAFIVLIGALVYGLILAYSPKPQLLQGQIEAREYNISSKVPGRVEEVLVRRGDKVNEGDLLYAIYSPELKA
KLMQAEGGRDAALAMQQEADNGARKQQIAASKEQWLKAQAAAKLARTTFDRVEVLFNEGVLARQKRDEAFTQWQAAKYTE
QAALAMYQMADEGARVETKAAAAGNARMAEGAVNEVSAILADSQMRSPKTGEISEVLLQAGELAPSGFPVVSLIDMNDAW
AVFQVREDQLKKFKQGDVLKLTIPALEREVEFTVSHIGVMGEFATWRATESGHDFDMRTFEVELRPNETIKDLRVGMSIL
FTL

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 35696; Mature: 35696

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTNRILAAVAFIVLIGALVYGLILAYSPKPQLLQGQIEAREYNISSKVPGRVEEVLVRR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHEECCCCCCCCHHHHHHHHC
GDKVNEGDLLYAIYSPELKAKLMQAEGGRDAALAMQQEADNGARKQQIAASKEQWLKAQA
CCCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AAKLARTTFDRVEVLFNEGVLARQKRDEAFTQWQAAKYTEQAALAMYQMADEGARVETKA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
AAAGNARMAEGAVNEVSAILADSQMRSPKTGEISEVLLQAGELAPSGFPVVSLIDMNDAW
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCE
AVFQVREDQLKKFKQGDVLKLTIPALEREVEFTVSHIGVMGEFATWRATESGHDFDMRTF
EEEEECHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCEEEE
EVELRPNETIKDLRVGMSILFTL
EEEECCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRTNRILAAVAFIVLIGALVYGLILAYSPKPQLLQGQIEAREYNISSKVPGRVEEVLVRR
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCHHHHEECCCCCCCCHHHHHHHHC
GDKVNEGDLLYAIYSPELKAKLMQAEGGRDAALAMQQEADNGARKQQIAASKEQWLKAQA
CCCCCCCCEEEEEECCHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AAKLARTTFDRVEVLFNEGVLARQKRDEAFTQWQAAKYTEQAALAMYQMADEGARVETKA
HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHH
AAAGNARMAEGAVNEVSAILADSQMRSPKTGEISEVLLQAGELAPSGFPVVSLIDMNDAW
HCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCE
AVFQVREDQLKKFKQGDVLKLTIPALEREVEFTVSHIGVMGEFATWRATESGHDFDMRTF
EEEEECHHHHHHHCCCCEEEEEHHHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCCEEEE
EVELRPNETIKDLRVGMSILFTL
EEEECCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9923682 [H]