| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is fhs [H]
Identifier: 157963532
GI number: 157963532
Start: 4525807
End: 4527519
Strand: Reverse
Name: fhs [H]
Synonym: Spea_3720
Alternate gene names: 157963532
Gene position: 4527519-4525807 (Counterclockwise)
Preceding gene: 157963533
Following gene: 157963530
Centisome position: 87.5
GC content: 49.74
Gene sequence:
>1713_bases ATGCATTCAGATATTGAAATTTCGCGCCAACACACCTGTTTACCTATCACTGATATCGCTAATAATTTAGGCCTTGAGCC TGATGAACTCTCTCTTTGTGGTGCCAATAAGGCCAAGATTTCGCTGTCGGTCGCTAAACGACTCGCAGACAGAGAAAATG CCAAACTGGTGATTGTCACTGCGGTGACGCCAACGCCATTCGGCGAAGGAAAAACCGTAACAACTATCGGCTTAACCCAA GCCATGAACCTCAACGGCATTAAAGCCTGCGCCTGTATTCGTCAGCCTAGTATGGGGCCTGTATTTGGCACTAAGGGCGG CGCCGCGGGTGGCGGTTATGCGCAAGTCGTGCCGATGGAAGAGCTGAACCTACACTTGACCGGTGATATTCACGCGGTTA GCAGTGCCCATAATTTAGCGGCAGCCGCAATCGACGCACGTCTATTCCATGAAACACGTTTAGGCGCCGAAGCTTTTACT CAAGAATCAGGTTTAACTGCGCTTAATATCGATGCTGAAAATATCCTTTGGCGCCGAGTGGTTGACCATAACGAACGCAG CCTAAGACAGATTAAAGTCGGCTTTGGTGCGGTTAATGGCCCTGTACATGAGTCGGGTTTCGACATCACTGCAGCGTCTG AATTGATGGCGATTCTAGCGCTGAGCCAAGACTTAAAAGATCTTAGACAGCGTATTGGTCGCCTCGTATTGGCGCTCAAT AATCAAGGTGAGCCGATCACAGCCGAAACGCTAGGCGTTGCAGGTGCGATGACGGTGATTATGGCCGATGCGATTGAGCC AACCTTGATGCAGACTCTGTCTGGTGATCCATGCTTTATTCATGCTGGCCCCTTTGCCAATATAGCGCATGGTAACTCTT CGATTATTGCCGATACCATCGCGGCTAAGCTTGCCGACGTTGTCGTGACAGAAGCGGGATTTGGCTCAGATATGGGCTTT GAAAAGTTCAGTAACATCAAGGTGAGAGAATCGGGCTACGCTCCGAGCGCATCTGTAGTGGTAGTGACACTGAAGGCTCT GAAAGCCAATAGTGGCATCGAATCTGACCAAGATATTAACCAGCCAGATACGCAGCGTCTAAAGGTCGGCTTTGCTAACC TTGAATGGCATATCAACAACGTCAGCCAATATGGCGTGCCAGTTGTGGTCGCAATTAACCGTTTCCCGACCGATACCGAC GAGGAACTTGAGTGGCTGAAGCAGGCTATTGAGCAAACTAAGGCCTTCGGCAGTGAGATAAGCGAAGCCTTTGGTAAAGG CGCAGAAGGAGCGACTAAGCTTGCGGATATGGTTTACCGTGCGACGCAGACGCCATCTGACTTTAACTTGCTGTACGAGA GCAATACTAGCCTTGAGTCTAAGCTGATGACGCTTGCAGAGGTGGGTTATGGCGCATCGAGCGTCACTCTATCTGATAAA GCTAAGTCACAATTAAACTGGCTGGCTAAGCATAACTATGGCGAGCTACCTATCTGTGTCGCTAAGACGCCGATGTCGAT AAGCCACGATCCAGATATTAAAGGGATCCCGACAGGTTTTGAACTGCCTATTACTGAGCTAAGGCTTAATGCTGGGGCAG GCTTTGTCACGGCGCTTGTGGGCAAAGTGATGACTATGCCAGGGCTGGGGATTAAGCCTGGCTATCTCAATGTCGATATC AACGATGATGGCGAGATTGTTGGATTAGCCTAA
Upstream 100 bases:
>100_bases AAAGCTAAAATAACAATGCATTTGTGTTTTCTCGCTATCTGATATCACCTATATTGCAGCGGCAACTACCCTACATAAAA ATAAAACGTGGAAAATCCGA
Downstream 100 bases:
>100_bases AAGTATTAGCTATCGAATCTAATAAAAAGCCCCGACAACCTTAGGTTGTCGGGGCTTTTTTCATTTTATCTTTAAGAGTT ACTTCTCTATAGCCGTTTGA
Product: formate--tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS [H]
Number of amino acids: Translated: 570; Mature: 570
Protein sequence:
>570_residues MHSDIEISRQHTCLPITDIANNLGLEPDELSLCGANKAKISLSVAKRLADRENAKLVIVTAVTPTPFGEGKTVTTIGLTQ AMNLNGIKACACIRQPSMGPVFGTKGGAAGGGYAQVVPMEELNLHLTGDIHAVSSAHNLAAAAIDARLFHETRLGAEAFT QESGLTALNIDAENILWRRVVDHNERSLRQIKVGFGAVNGPVHESGFDITAASELMAILALSQDLKDLRQRIGRLVLALN NQGEPITAETLGVAGAMTVIMADAIEPTLMQTLSGDPCFIHAGPFANIAHGNSSIIADTIAAKLADVVVTEAGFGSDMGF EKFSNIKVRESGYAPSASVVVVTLKALKANSGIESDQDINQPDTQRLKVGFANLEWHINNVSQYGVPVVVAINRFPTDTD EELEWLKQAIEQTKAFGSEISEAFGKGAEGATKLADMVYRATQTPSDFNLLYESNTSLESKLMTLAEVGYGASSVTLSDK AKSQLNWLAKHNYGELPICVAKTPMSISHDPDIKGIPTGFELPITELRLNAGAGFVTALVGKVMTMPGLGIKPGYLNVDI NDDGEIVGLA
Sequences:
>Translated_570_residues MHSDIEISRQHTCLPITDIANNLGLEPDELSLCGANKAKISLSVAKRLADRENAKLVIVTAVTPTPFGEGKTVTTIGLTQ AMNLNGIKACACIRQPSMGPVFGTKGGAAGGGYAQVVPMEELNLHLTGDIHAVSSAHNLAAAAIDARLFHETRLGAEAFT QESGLTALNIDAENILWRRVVDHNERSLRQIKVGFGAVNGPVHESGFDITAASELMAILALSQDLKDLRQRIGRLVLALN NQGEPITAETLGVAGAMTVIMADAIEPTLMQTLSGDPCFIHAGPFANIAHGNSSIIADTIAAKLADVVVTEAGFGSDMGF EKFSNIKVRESGYAPSASVVVVTLKALKANSGIESDQDINQPDTQRLKVGFANLEWHINNVSQYGVPVVVAINRFPTDTD EELEWLKQAIEQTKAFGSEISEAFGKGAEGATKLADMVYRATQTPSDFNLLYESNTSLESKLMTLAEVGYGASSVTLSDK AKSQLNWLAKHNYGELPICVAKTPMSISHDPDIKGIPTGFELPITELRLNAGAGFVTALVGKVMTMPGLGIKPGYLNVDI NDDGEIVGLA >Mature_570_residues MHSDIEISRQHTCLPITDIANNLGLEPDELSLCGANKAKISLSVAKRLADRENAKLVIVTAVTPTPFGEGKTVTTIGLTQ AMNLNGIKACACIRQPSMGPVFGTKGGAAGGGYAQVVPMEELNLHLTGDIHAVSSAHNLAAAAIDARLFHETRLGAEAFT QESGLTALNIDAENILWRRVVDHNERSLRQIKVGFGAVNGPVHESGFDITAASELMAILALSQDLKDLRQRIGRLVLALN NQGEPITAETLGVAGAMTVIMADAIEPTLMQTLSGDPCFIHAGPFANIAHGNSSIIADTIAAKLADVVVTEAGFGSDMGF EKFSNIKVRESGYAPSASVVVVTLKALKANSGIESDQDINQPDTQRLKVGFANLEWHINNVSQYGVPVVVAINRFPTDTD EELEWLKQAIEQTKAFGSEISEAFGKGAEGATKLADMVYRATQTPSDFNLLYESNTSLESKLMTLAEVGYGASSVTLSDK AKSQLNWLAKHNYGELPICVAKTPMSISHDPDIKGIPTGFELPITELRLNAGAGFVTALVGKVMTMPGLGIKPGYLNVDI NDDGEIVGLA
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family [H]
Homologues:
Organism=Homo sapiens, GI222136639, Length=615, Percent_Identity=46.8292682926829, Blast_Score=509, Evalue=1e-144, Organism=Homo sapiens, GI36796743, Length=615, Percent_Identity=45.0406504065041, Blast_Score=486, Evalue=1e-137, Organism=Homo sapiens, GI310124614, Length=81, Percent_Identity=44.4444444444444, Blast_Score=84, Evalue=3e-16, Organism=Caenorhabditis elegans, GI17568737, Length=618, Percent_Identity=46.4401294498382, Blast_Score=500, Evalue=1e-141, Organism=Caenorhabditis elegans, GI17568739, Length=618, Percent_Identity=46.4401294498382, Blast_Score=500, Evalue=1e-141, Organism=Saccharomyces cerevisiae, GI6321643, Length=625, Percent_Identity=45.44, Blast_Score=490, Evalue=1e-139, Organism=Saccharomyces cerevisiae, GI6319558, Length=629, Percent_Identity=44.9920508744038, Blast_Score=488, Evalue=1e-138, Organism=Drosophila melanogaster, GI24645718, Length=617, Percent_Identity=45.0567260940032, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI17137370, Length=617, Percent_Identity=45.0567260940032, Blast_Score=469, Evalue=1e-132, Organism=Drosophila melanogaster, GI62472483, Length=617, Percent_Identity=45.0567260940032, Blast_Score=468, Evalue=1e-132, Organism=Drosophila melanogaster, GI45551871, Length=617, Percent_Identity=45.0567260940032, Blast_Score=468, Evalue=1e-132,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000559 [H]
Pfam domain/function: PF01268 FTHFS [H]
EC number: =6.3.4.3 [H]
Molecular weight: Translated: 60497; Mature: 60497
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHSDIEISRQHTCLPITDIANNLGLEPDELSLCGANKAKISLSVAKRLADRENAKLVIVT CCCCCEECCCCCEEEHHHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHCCCCCEEEEEE AVTPTPFGEGKTVTTIGLTQAMNLNGIKACACIRQPSMGPVFGTKGGAAGGGYAQVVPME EECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHH ELNLHLTGDIHAVSSAHNLAAAAIDARLFHETRLGAEAFTQESGLTALNIDAENILWRRV HCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECCHHHHHHHHH VDHNERSLRQIKVGFGAVNGPVHESGFDITAASELMAILALSQDLKDLRQRIGRLVLALN HCCCHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEC NQGEPITAETLGVAGAMTVIMADAIEPTLMQTLSGDPCFIHAGPFANIAHGNSSIIADTI CCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCEECCCCCCHHHHHH AAKLADVVVTEAGFGSDMGFEKFSNIKVRESGYAPSASVVVVTLKALKANSGIESDQDIN HHHHHHHHEECCCCCCCCCHHHHCCEEEEECCCCCCCCEEEEEEEHHHCCCCCCCCCCCC QPDTQRLKVGFANLEWHINNVSQYGVPVVVAINRFPTDTDEELEWLKQAIEQTKAFGSEI CCCCCEEEEEEEEEEEEECCHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH SEAFGKGAEGATKLADMVYRATQTPSDFNLLYESNTSLESKLMTLAEVGYGASSVTLSDK HHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECHH AKSQLNWLAKHNYGELPICVAKTPMSISHDPDIKGIPTGFELPITELRLNAGAGFVTALV HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCHHHHHHH GKVMTMPGLGIKPGYLNVDINDDGEIVGLA HHHHHCCCCCCCCCEEEEEECCCCCEEEEC >Mature Secondary Structure MHSDIEISRQHTCLPITDIANNLGLEPDELSLCGANKAKISLSVAKRLADRENAKLVIVT CCCCCEECCCCCEEEHHHHHHHCCCCCCCEEEECCCCCEEEHHHHHHHHCCCCCEEEEEE AVTPTPFGEGKTVTTIGLTQAMNLNGIKACACIRQPSMGPVFGTKGGAAGGGYAQVVPME EECCCCCCCCCEEEEEEEEEECCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEHH ELNLHLTGDIHAVSSAHNLAAAAIDARLFHETRLGAEAFTQESGLTALNIDAENILWRRV HCCEEEECCEEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEECCHHHHHHHHH VDHNERSLRQIKVGFGAVNGPVHESGFDITAASELMAILALSQDLKDLRQRIGRLVLALN HCCCHHHHHEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEC NQGEPITAETLGVAGAMTVIMADAIEPTLMQTLSGDPCFIHAGPFANIAHGNSSIIADTI CCCCEEEHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCEECCCCCCHHHHHH AAKLADVVVTEAGFGSDMGFEKFSNIKVRESGYAPSASVVVVTLKALKANSGIESDQDIN HHHHHHHHEECCCCCCCCCHHHHCCEEEEECCCCCCCCEEEEEEEHHHCCCCCCCCCCCC QPDTQRLKVGFANLEWHINNVSQYGVPVVVAINRFPTDTDEELEWLKQAIEQTKAFGSEI CCCCCEEEEEEEEEEEEECCHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHH SEAFGKGAEGATKLADMVYRATQTPSDFNLLYESNTSLESKLMTLAEVGYGASSVTLSDK HHHHCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECHH AKSQLNWLAKHNYGELPICVAKTPMSISHDPDIKGIPTGFELPITELRLNAGAGFVTALV HHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHEEECCCCHHHHHHH GKVMTMPGLGIKPGYLNVDINDDGEIVGLA HHHHHCCCCCCCCCEEEEEECCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA