| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963528
Identifier: 157963528
GI number: 157963528
Start: 4521617
End: 4522804
Strand: Reverse
Name: 157963528
Synonym: Spea_3716
Alternate gene names: NA
Gene position: 4522804-4521617 (Counterclockwise)
Preceding gene: 157963529
Following gene: 157963527
Centisome position: 87.4
GC content: 49.58
Gene sequence:
>1188_bases ATGACTATTTCAACTATGCGTCTTACAGGCGTAGCGGCAGCGTGCGCGCTGGTTTCAACTCAAGCACTAGCAAGCGATCC TAGCCTGACCAACCCAGCAATTAGTGCTGTGCTCGATGGCTATTACCAAAGTGGCGAACGCCCCATGTCAGAGCGAGTCG AAGGCTTTGGTCTGGGCCATACCGAATTGGCCATGAGTGCCAATATCGACGATATGTTCTACGGTAAATTGACGGCCGTG GTCGAGATGCATGACGGTGAAACTGAGCTTGGTTTAGAAGAAGCCTTCATTCAGACCTTAGCCATGCCAGGTGGCTTCTC AATTCGCGCCGGCCGCTTCTTGTCGGATATTGGTTACTTGAACAATCAGCACGTACATACAGATTCGTTCTCAGATAGAC CTGCGGCTTACCGCGCATTTTTAGGCAGCCACTATTTCGATGATGGTGTGCGTTTGAGCTATGTAGCACCAACGGATCTG TATTGGACCATGGGTGTTGAGGCTTTTAAGGGTGACAACATGCGCGCCGCCGACGAGCACGGCGAGCGTGAGTATGAAAA TTTGGGTGTGTATACCGCCTTTACTAAAATTGGTGGCGATGTCGGTGCTAACGGCTCTTGGCAAGCGGGTCTAAGTTACT TGCGTAACGAGAATGGTCGTATGACGGCCGATGAGCACGAGCATGTTGAAGTGCAAGATGACCACGATCATGACCATAGT CACAGCGCGCAGTACACGGGTGAAAATACCTATGTCGCTGACTTTGTTTATAAGTGGGCGCCTAATGGTAACTATAAATA TCAGCATTTAACTCTAAGTGGAGAATACTTCCGTGTTACCGACTTTAAGCCGCTAGAGGAACATGATGCTCACGAGGAGC ATGGCGATGAAGGCAAAGACTATCAAGAAGGCTGGTATTTAAGCAGCGTTTATCAGTTGTCGCCTCATTGGTCGGCGGGT CTACGTTACGGCCAAGCCGATACCCAAATGATGCATGGCGATCACTTCGATCCGCAGAAGCTAAAAGAGACTGAGGTGAG CCTAGCTTGGCATCACAGTCACTTCTCTACCGTGCGTTTGCAGTATACCAACCAACAAGGCACGAACTTTGATGGCTTCG AAGATGACAACATCATCACTCTACAATATGTCATGACTCTGGGGGCTCACGGTGCGCATCAATTCTAA
Upstream 100 bases:
>100_bases CGCGCCCCTCCCGCTTCAGCCTAGTTCTTCACTAACAACACTGATTAAGAATTTTCATAGTATTCCCACGGGGAAGACTT AGCTGTATTTCGGAGAAAAA
Downstream 100 bases:
>100_bases GCGGTTTTTATCGAGAGGGGCAAAAGCCCTCACACTTGCATTCGCACTCGGTGTGACCAACAACGCGGTTGCAGGTTTAA ATATTTTTGCTTGTGAGCCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTISTMRLTGVAAACALVSTQALASDPSLTNPAISAVLDGYYQSGERPMSERVEGFGLGHTELAMSANIDDMFYGKLTAV VEMHDGETELGLEEAFIQTLAMPGGFSIRAGRFLSDIGYLNNQHVHTDSFSDRPAAYRAFLGSHYFDDGVRLSYVAPTDL YWTMGVEAFKGDNMRAADEHGEREYENLGVYTAFTKIGGDVGANGSWQAGLSYLRNENGRMTADEHEHVEVQDDHDHDHS HSAQYTGENTYVADFVYKWAPNGNYKYQHLTLSGEYFRVTDFKPLEEHDAHEEHGDEGKDYQEGWYLSSVYQLSPHWSAG LRYGQADTQMMHGDHFDPQKLKETEVSLAWHHSHFSTVRLQYTNQQGTNFDGFEDDNIITLQYVMTLGAHGAHQF
Sequences:
>Translated_395_residues MTISTMRLTGVAAACALVSTQALASDPSLTNPAISAVLDGYYQSGERPMSERVEGFGLGHTELAMSANIDDMFYGKLTAV VEMHDGETELGLEEAFIQTLAMPGGFSIRAGRFLSDIGYLNNQHVHTDSFSDRPAAYRAFLGSHYFDDGVRLSYVAPTDL YWTMGVEAFKGDNMRAADEHGEREYENLGVYTAFTKIGGDVGANGSWQAGLSYLRNENGRMTADEHEHVEVQDDHDHDHS HSAQYTGENTYVADFVYKWAPNGNYKYQHLTLSGEYFRVTDFKPLEEHDAHEEHGDEGKDYQEGWYLSSVYQLSPHWSAG LRYGQADTQMMHGDHFDPQKLKETEVSLAWHHSHFSTVRLQYTNQQGTNFDGFEDDNIITLQYVMTLGAHGAHQF >Mature_394_residues TISTMRLTGVAAACALVSTQALASDPSLTNPAISAVLDGYYQSGERPMSERVEGFGLGHTELAMSANIDDMFYGKLTAVV EMHDGETELGLEEAFIQTLAMPGGFSIRAGRFLSDIGYLNNQHVHTDSFSDRPAAYRAFLGSHYFDDGVRLSYVAPTDLY WTMGVEAFKGDNMRAADEHGEREYENLGVYTAFTKIGGDVGANGSWQAGLSYLRNENGRMTADEHEHVEVQDDHDHDHSH SAQYTGENTYVADFVYKWAPNGNYKYQHLTLSGEYFRVTDFKPLEEHDAHEEHGDEGKDYQEGWYLSSVYQLSPHWSAGL RYGQADTQMMHGDHFDPQKLKETEVSLAWHHSHFSTVRLQYTNQQGTNFDGFEDDNIITLQYVMTLGAHGAHQF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44293; Mature: 44162
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISTMRLTGVAAACALVSTQALASDPSLTNPAISAVLDGYYQSGERPMSERVEGFGLGH CCEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCC TELAMSANIDDMFYGKLTAVVEMHDGETELGLEEAFIQTLAMPGGFSIRAGRFLSDIGYL HHEEEECCCCHHHHCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHCC NNQHVHTDSFSDRPAAYRAFLGSHYFDDGVRLSYVAPTDLYWTMGVEAFKGDNMRAADEH CCCEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCEECCCCCCCCHHC GEREYENLGVYTAFTKIGGDVGANGSWQAGLSYLRNENGRMTADEHEHVEVQDDHDHDHS CCHHHHHCCEEEEEEHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC HSAQYTGENTYVADFVYKWAPNGNYKYQHLTLSGEYFRVTDFKPLEEHDAHEEHGDEGKD CCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCHHCCCHHHCCCCCCC YQEGWYLSSVYQLSPHWSAGLRYGQADTQMMHGDHFDPQKLKETEVSLAWHHSHFSTVRL HHCCEEEEEEEEECCCHHHCCCCCCCHHHHHCCCCCCHHHHHHHHEEEEEECCCEEEEEE QYTNQQGTNFDGFEDDNIITLQYVMTLGAHGAHQF EEECCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCC >Mature Secondary Structure TISTMRLTGVAAACALVSTQALASDPSLTNPAISAVLDGYYQSGERPMSERVEGFGLGH CEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHCCCCC TELAMSANIDDMFYGKLTAVVEMHDGETELGLEEAFIQTLAMPGGFSIRAGRFLSDIGYL HHEEEECCCCHHHHCEEEEEEEECCCCCCCCHHHHHHHHHCCCCCCEEECCHHHHHHHCC NNQHVHTDSFSDRPAAYRAFLGSHYFDDGVRLSYVAPTDLYWTMGVEAFKGDNMRAADEH CCCEEECCCCCCCCHHHHHHHHCCCCCCCCEEEEECCCCEEEECCCCEECCCCCCCCHHC GEREYENLGVYTAFTKIGGDVGANGSWQAGLSYLRNENGRMTADEHEHVEVQDDHDHDHS CCHHHHHCCEEEEEEHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCC HSAQYTGENTYVADFVYKWAPNGNYKYQHLTLSGEYFRVTDFKPLEEHDAHEEHGDEGKD CCCCCCCCCCEEEEEEEEECCCCCEEEEEEEECCCEEEECCCCCCHHCCCHHHCCCCCCC YQEGWYLSSVYQLSPHWSAGLRYGQADTQMMHGDHFDPQKLKETEVSLAWHHSHFSTVRL HHCCEEEEEEEEECCCHHHCCCCCCCHHHHHCCCCCCHHHHHHHHEEEEEECCCEEEEEE QYTNQQGTNFDGFEDDNIITLQYVMTLGAHGAHQF EEECCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9537320 [H]