| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963478
Identifier: 157963478
GI number: 157963478
Start: 4461179
End: 4462345
Strand: Reverse
Name: 157963478
Synonym: Spea_3666
Alternate gene names: NA
Gene position: 4462345-4461179 (Counterclockwise)
Preceding gene: 157963479
Following gene: 157963477
Centisome position: 86.24
GC content: 46.62
Gene sequence:
>1167_bases ATGAAACGGATTTTACTGTTAACCCTGTGCGCTTTTTCCAATCTGGCCGTCGCAGTCGAGCCTCTATTTGACACTCCTAA AGATATGCAGCCGACTTGGGTCGACGACATCTTGTCTGTGTTTGGTGCCGATGGTGAGTTTGACCAGAGCAAGCCTATCG ACATGAGCTACTTACCAACGGCTTATTACACGCCGGAGAAGAAGTTTGGCGTGGGTCTGTTGATGGTGGGGTTATATAAA ACCGACGGTGCAGCGAGCGAGGAGCAGCCTTCATCATTGGTATTGAATTCATTTGTTTCAATGAATAATTCTTACGGTGT CGAAGTGGAAAATATGACCTTCTTCAACGGCGGTAAGCAGCGTTTACAGCTGGGGCTAGAGCTTCATAACGAAGCGGCAG TTTATTATGGTCAAGGCATAGCACAAGGCAATATCGACGCCAATCATCATGAGTTTGAAGAGCAGTTATACAGCTTTAAA CCCCGCTGGATGACGGAAGTGGCCGATAACTATTTTCTCGGTATTGGGGCTGACTTTACCTACGCCAGTGCTGAAAAGTT AGAGTTAGTTGACACAGGGCTGCCTGTGGATTCTGCGGATATTTTGCCGAATAATTTTAGTTCGGGTGTGGTGGTAACCA GCATCTATGACTCTCGTGATTACCGCTTAAATGCCACCAAAGGTTGGTTATTTCAGATCGATGCGGGTCTGTATCAAAAC GATGAGTACTCAAGTTTCTCGACTTACGATCTCGAACTCGCCAATTATATCGACTTAAGCTCAACTTCCTTACTGAGCTC TGCGCCAGGGCTGATTGCATGGCAAGTACAGGGCCATTTTACCGAAGGCGATGTGCCTTGGAACATGTTGCCTGATCTTG GCGGCTCAGGTGCGATGCGTGGTTACATCAAAGGCCGTTACCGTGACAAGCAGATGATGATGGGCCAAGTGGAATATCGT TTACCCATCTTCCAGCGTTACGGCATGGTGTTTTGGGGCGGCGTAGGTAGTGTGGCCTCCAAGGTGAGTGATTTAAACGA AGAGTTGTTGACCTCTTACGGCACAGGATTCCGCTTTAAAATCAAAGATAATATTAATTTACGCCTAGATATTGGTGTGG GTGAAAACGAGACTAACTTCTACCTCAATGTGAACGAAGTATTCTAA
Upstream 100 bases:
>100_bases CTAGAGTCATCAGCTGTCTTTTGCGGCCAGAGGCATCACGTTTTTTTCACGACATATCGCCTATAAACATCTATGTTCTC CACTATTAATTCGAGTATTT
Downstream 100 bases:
>100_bases CCATGAAAGGTTTATTGGTTTTTATGTCTAAGTTCGCGATGAGAATGATAGGCCTAATATCTGCGCTCTTTGTGGCTAAT CATGCATTAGCCACCGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MKRILLLTLCAFSNLAVAVEPLFDTPKDMQPTWVDDILSVFGADGEFDQSKPIDMSYLPTAYYTPEKKFGVGLLMVGLYK TDGAASEEQPSSLVLNSFVSMNNSYGVEVENMTFFNGGKQRLQLGLELHNEAAVYYGQGIAQGNIDANHHEFEEQLYSFK PRWMTEVADNYFLGIGADFTYASAEKLELVDTGLPVDSADILPNNFSSGVVVTSIYDSRDYRLNATKGWLFQIDAGLYQN DEYSSFSTYDLELANYIDLSSTSLLSSAPGLIAWQVQGHFTEGDVPWNMLPDLGGSGAMRGYIKGRYRDKQMMMGQVEYR LPIFQRYGMVFWGGVGSVASKVSDLNEELLTSYGTGFRFKIKDNINLRLDIGVGENETNFYLNVNEVF
Sequences:
>Translated_388_residues MKRILLLTLCAFSNLAVAVEPLFDTPKDMQPTWVDDILSVFGADGEFDQSKPIDMSYLPTAYYTPEKKFGVGLLMVGLYK TDGAASEEQPSSLVLNSFVSMNNSYGVEVENMTFFNGGKQRLQLGLELHNEAAVYYGQGIAQGNIDANHHEFEEQLYSFK PRWMTEVADNYFLGIGADFTYASAEKLELVDTGLPVDSADILPNNFSSGVVVTSIYDSRDYRLNATKGWLFQIDAGLYQN DEYSSFSTYDLELANYIDLSSTSLLSSAPGLIAWQVQGHFTEGDVPWNMLPDLGGSGAMRGYIKGRYRDKQMMMGQVEYR LPIFQRYGMVFWGGVGSVASKVSDLNEELLTSYGTGFRFKIKDNINLRLDIGVGENETNFYLNVNEVF >Mature_388_residues MKRILLLTLCAFSNLAVAVEPLFDTPKDMQPTWVDDILSVFGADGEFDQSKPIDMSYLPTAYYTPEKKFGVGLLMVGLYK TDGAASEEQPSSLVLNSFVSMNNSYGVEVENMTFFNGGKQRLQLGLELHNEAAVYYGQGIAQGNIDANHHEFEEQLYSFK PRWMTEVADNYFLGIGADFTYASAEKLELVDTGLPVDSADILPNNFSSGVVVTSIYDSRDYRLNATKGWLFQIDAGLYQN DEYSSFSTYDLELANYIDLSSTSLLSSAPGLIAWQVQGHFTEGDVPWNMLPDLGGSGAMRGYIKGRYRDKQMMMGQVEYR LPIFQRYGMVFWGGVGSVASKVSDLNEELLTSYGTGFRFKIKDNINLRLDIGVGENETNFYLNVNEVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43362; Mature: 43362
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRILLLTLCAFSNLAVAVEPLFDTPKDMQPTWVDDILSVFGADGEFDQSKPIDMSYLPT CCCEEEEEEHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCC AYYTPEKKFGVGLLMVGLYKTDGAASEEQPSSLVLNSFVSMNNSYGVEVENMTFFNGGKQ EEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCE RLQLGLELHNEAAVYYGQGIAQGNIDANHHEFEEQLYSFKPRWMTEVADNYFLGIGADFT EEEEEEEECCCEEEEEECCEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCE YASAEKLELVDTGLPVDSADILPNNFSSGVVVTSIYDSRDYRLNATKGWLFQIDAGLYQN ECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCCC DEYSSFSTYDLELANYIDLSSTSLLSSAPGLIAWQVQGHFTEGDVPWNMLPDLGGSGAMR CCCCCCEEEEEEEHHEECCCCCHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEE GYIKGRYRDKQMMMGQVEYRLPIFQRYGMVFWGGVGSVASKVSDLNEELLTSYGTGFRFK EEEECCCCCHHHHHHHHEECCHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEE IKDNINLRLDIGVGENETNFYLNVNEVF EECCCEEEEEEECCCCCCEEEEEEEECC >Mature Secondary Structure MKRILLLTLCAFSNLAVAVEPLFDTPKDMQPTWVDDILSVFGADGEFDQSKPIDMSYLPT CCCEEEEEEHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCEECCC AYYTPEKKFGVGLLMVGLYKTDGAASEEQPSSLVLNSFVSMNNSYGVEVENMTFFNGGKQ EEECCCCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEEEEECCCCE RLQLGLELHNEAAVYYGQGIAQGNIDANHHEFEEQLYSFKPRWMTEVADNYFLGIGADFT EEEEEEEECCCEEEEEECCEECCCCCCCHHHHHHHHHHCCCCHHHHHCCCEEEEECCCCE YASAEKLELVDTGLPVDSADILPNNFSSGVVVTSIYDSRDYRLNATKGWLFQIDAGLYQN ECCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEECCCCEEEEEECCCCCC DEYSSFSTYDLELANYIDLSSTSLLSSAPGLIAWQVQGHFTEGDVPWNMLPDLGGSGAMR CCCCCCEEEEEEEHHEECCCCCHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCCCCCCEE GYIKGRYRDKQMMMGQVEYRLPIFQRYGMVFWGGVGSVASKVSDLNEELLTSYGTGFRFK EEEECCCCCHHHHHHHHEECCHHHHHCCEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEE IKDNINLRLDIGVGENETNFYLNVNEVF EECCCEEEEEEECCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA