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The map label for this gene is dppD [H]

Identifier: 157963453

GI number: 157963453

Start: 4429308

End: 4430015

Strand: Reverse

Name: dppD [H]

Synonym: Spea_3641

Alternate gene names: 157963453

Gene position: 4430015-4429308 (Counterclockwise)

Preceding gene: 157963454

Following gene: 157963452

Centisome position: 85.61

GC content: 52.82

Gene sequence:

>708_bases
ATGCTGACCGTCGATAGACTCAGTATTGCATCGAACGATATCTGTTTATTATCCCCCTTGAGCTTCTCGGTCGCTAAGGG
CGAAGTGCTTGGGGTGGTGGGCGCCAGTGGCAGCGGCAAGAGCCTGCTGGCACAAGCGTTATTAGGGCAAGTGCCAAGTG
GATTTAATTTAACGGGGCAAGTGTTGCACAAGAGCGGGGACAGACGAGTATTGGCGGCGCAGTCGGCGTCAGTACTCGAT
CCCTTAAGGCGGATCTCCTCCCAGCTAAGTTACGTCTTAAGTCGAGTGCCTATAGGGGCGACACGCAAAAAGCCCTTTGC
GTTGGCAGCCGATATTACTCGTTGCTATCGGCATCAACTATCAGGGGGCATGGCTAAGCGTGCACTGCTGGCCCAGGCTT
GCTGGCAGGCCAGTGAAATAATGATCGCCGATGAGCCTTGTTGTGGTCTTGATACACCTGCGGCCGCAGGGATCTACCAA
CATCTAAGTCACTTAGCACGTAATGAAAGGGTTGCTGTGATGGTGATTAGTCATAACTTAAGGCAGCTTCTTACTGTGGC
GGATCGCATCTTAGTGCTGAGAGAAGGCAAATTGGTTGAGATAACGACTAGTGCCAATATCCGCAGCGGAGCGTGCCATA
GCTATACAAGAAGCTTATGGGCGGCGCTGCCGGAGCATTGGGGAGTAACAGATGCTAACGCTGCGTAA

Upstream 100 bases:

>100_bases
TAATGCTACTCGTTTGCTTATTGCTGCTGTCTTTTATTGCCCAGCGTTTGTTAGTCGCGCTGCGCCAGGGGCCGCAGACT
CATGTTAAAGGAGAGGCGTC

Downstream 100 bases:

>100_bases
TGCTTGTTTACGGCGCGGGGAGCAAAAGATCGCATTTCCCGATCTCAGCTTACAGTCTGGAGAAGTGCTGGGTCTATCGG
GCCCTAGCGGAGTGGGTAAG

Product: ABC transporter-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MLTVDRLSIASNDICLLSPLSFSVAKGEVLGVVGASGSGKSLLAQALLGQVPSGFNLTGQVLHKSGDRRVLAAQSASVLD
PLRRISSQLSYVLSRVPIGATRKKPFALAADITRCYRHQLSGGMAKRALLAQACWQASEIMIADEPCCGLDTPAAAGIYQ
HLSHLARNERVAVMVISHNLRQLLTVADRILVLREGKLVEITTSANIRSGACHSYTRSLWAALPEHWGVTDANAA

Sequences:

>Translated_235_residues
MLTVDRLSIASNDICLLSPLSFSVAKGEVLGVVGASGSGKSLLAQALLGQVPSGFNLTGQVLHKSGDRRVLAAQSASVLD
PLRRISSQLSYVLSRVPIGATRKKPFALAADITRCYRHQLSGGMAKRALLAQACWQASEIMIADEPCCGLDTPAAAGIYQ
HLSHLARNERVAVMVISHNLRQLLTVADRILVLREGKLVEITTSANIRSGACHSYTRSLWAALPEHWGVTDANAA
>Mature_235_residues
MLTVDRLSIASNDICLLSPLSFSVAKGEVLGVVGASGSGKSLLAQALLGQVPSGFNLTGQVLHKSGDRRVLAAQSASVLD
PLRRISSQLSYVLSRVPIGATRKKPFALAADITRCYRHQLSGGMAKRALLAQACWQASEIMIADEPCCGLDTPAAAGIYQ
HLSHLARNERVAVMVISHNLRQLLTVADRILVLREGKLVEITTSANIRSGACHSYTRSLWAALPEHWGVTDANAA

Specific function: Part of the binding-protein-dependent transport system for dipeptides. Probably responsible for energy coupling to the transport system. Expressed to facilitate adaptation to nutrient deficiency conditions, which also induce sporulation [H]

COG id: COG0444

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI11967969, Length=214, Percent_Identity=27.1028037383178, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI1789963, Length=258, Percent_Identity=30.2325581395349, Blast_Score=103, Evalue=8e-24,
Organism=Escherichia coli, GI145693107, Length=264, Percent_Identity=30.6818181818182, Blast_Score=103, Evalue=9e-24,
Organism=Escherichia coli, GI48994883, Length=253, Percent_Identity=27.6679841897233, Blast_Score=97, Evalue=8e-22,
Organism=Escherichia coli, GI1787759, Length=245, Percent_Identity=27.3469387755102, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1788506, Length=243, Percent_Identity=31.2757201646091, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787548, Length=242, Percent_Identity=27.2727272727273, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787758, Length=234, Percent_Identity=29.0598290598291, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1787500, Length=228, Percent_Identity=28.9473684210526, Blast_Score=87, Evalue=8e-19,
Organism=Escherichia coli, GI1789890, Length=226, Percent_Identity=29.2035398230088, Blast_Score=84, Evalue=1e-17,
Organism=Escherichia coli, GI1787547, Length=231, Percent_Identity=26.4069264069264, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1789962, Length=229, Percent_Identity=27.5109170305677, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1790544, Length=231, Percent_Identity=29.004329004329, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI48994997, Length=225, Percent_Identity=28.4444444444444, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1790525, Length=238, Percent_Identity=26.4705882352941, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1789032, Length=223, Percent_Identity=26.0089686098655, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI87081834, Length=202, Percent_Identity=30.6930693069307, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1788165, Length=205, Percent_Identity=24.390243902439, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787105, Length=219, Percent_Identity=26.9406392694064, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI87081791, Length=226, Percent_Identity=23.4513274336283, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=26.0869565217391, Blast_Score=62, Evalue=4e-11,
Organism=Drosophila melanogaster, GI62484234, Length=207, Percent_Identity=27.536231884058, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI116007184, Length=197, Percent_Identity=26.9035532994924, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI221500365, Length=197, Percent_Identity=26.9035532994924, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010066
- InterPro:   IPR013563 [H]

Pfam domain/function: PF00005 ABC_tran; PF08352 oligo_HPY [H]

EC number: NA

Molecular weight: Translated: 25047; Mature: 25047

Theoretical pI: Translated: 9.64; Mature: 9.64

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTVDRLSIASNDICLLSPLSFSVAKGEVLGVVGASGSGKSLLAQALLGQVPSGFNLTGQ
CCCCCCCCCCCCCEEEECCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHH
VLHKSGDRRVLAAQSASVLDPLRRISSQLSYVLSRVPIGATRKKPFALAADITRCYRHQL
HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SGGMAKRALLAQACWQASEIMIADEPCCGLDTPAAAGIYQHLSHLARNERVAVMVISHNL
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHH
RQLLTVADRILVLREGKLVEITTSANIRSGACHSYTRSLWAALPEHWGVTDANAA
HHHHHHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MLTVDRLSIASNDICLLSPLSFSVAKGEVLGVVGASGSGKSLLAQALLGQVPSGFNLTGQ
CCCCCCCCCCCCCEEEECCCCCHHCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHH
VLHKSGDRRVLAAQSASVLDPLRRISSQLSYVLSRVPIGATRKKPFALAADITRCYRHQL
HHHCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
SGGMAKRALLAQACWQASEIMIADEPCCGLDTPAAAGIYQHLSHLARNERVAVMVISHNL
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEHHHH
RQLLTVADRILVLREGKLVEITTSANIRSGACHSYTRSLWAALPEHWGVTDANAA
HHHHHHHHHHHEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1766370; 9384377 [H]