| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963367
Identifier: 157963367
GI number: 157963367
Start: 4340168
End: 4340512
Strand: Reverse
Name: 157963367
Synonym: Spea_3553
Alternate gene names: NA
Gene position: 4340512-4340168 (Counterclockwise)
Preceding gene: 157963370
Following gene: 157963361
Centisome position: 83.88
GC content: 40.87
Gene sequence:
>345_bases ATGTCTAATACAATGTCTAAGGTTATTGAATTTTTTAACTATTTAGGGTCATTTATCTACCCTTGGCTACCAGAAGTTTC CACGGCAATTGTAGCCTGTTGTCTTGTGGTCTTTGGTGCCGATATCAATCGTTTTCTACGTCGCTACTTTGCGGGACGCT CTTTTCTGCTACGCACGCTGATTTTTGTCATCGTCAATGCGTTTGGTTATGGACTTATTATTATCCATTTAAGCCCTTTG TTAGCGCAAAATATGGCTAAGATCCCATCTCATTGGTTATTTGCTCTAGTTATCGCTATTTTCTTCGCGATAGGTAGCTG GGCGCAGCGCAACAGACAAGTTTAA
Upstream 100 bases:
>100_bases TTGACGATATCGCTCATTTTCTCTGGTGAGTAATAGTAGCTTGTGTCCCATACTAACTCCCTATATTCTACATCCACCTA GATTTAAACCTGCAGGGCTG
Downstream 100 bases:
>100_bases GTTATTAATTTTAGTGTAGATTGTTTTCATTAATTTAGGCAACTTGTCGCTATTTTATCCCCGCTGTAGATGGCTTTATT TAACCTAAATCTAGGCCAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSNTMSKVIEFFNYLGSFIYPWLPEVSTAIVACCLVVFGADINRFLRRYFAGRSFLLRTLIFVIVNAFGYGLIIIHLSPL LAQNMAKIPSHWLFALVIAIFFAIGSWAQRNRQV
Sequences:
>Translated_114_residues MSNTMSKVIEFFNYLGSFIYPWLPEVSTAIVACCLVVFGADINRFLRRYFAGRSFLLRTLIFVIVNAFGYGLIIIHLSPL LAQNMAKIPSHWLFALVIAIFFAIGSWAQRNRQV >Mature_113_residues SNTMSKVIEFFNYLGSFIYPWLPEVSTAIVACCLVVFGADINRFLRRYFAGRSFLLRTLIFVIVNAFGYGLIIIHLSPLL AQNMAKIPSHWLFALVIAIFFAIGSWAQRNRQV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13009; Mature: 12878
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNTMSKVIEFFNYLGSFIYPWLPEVSTAIVACCLVVFGADINRFLRRYFAGRSFLLRTL CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH IFVIVNAFGYGLIIIHLSPLLAQNMAKIPSHWLFALVIAIFFAIGSWAQRNRQV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SNTMSKVIEFFNYLGSFIYPWLPEVSTAIVACCLVVFGADINRFLRRYFAGRSFLLRTL CHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH IFVIVNAFGYGLIIIHLSPLLAQNMAKIPSHWLFALVIAIFFAIGSWAQRNRQV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA