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The map label for this gene is yadT [C]

Identifier: 157963344

GI number: 157963344

Start: 4312683

End: 4313681

Strand: Reverse

Name: yadT [C]

Synonym: Spea_3530

Alternate gene names: 157963344

Gene position: 4313681-4312683 (Counterclockwise)

Preceding gene: 157963345

Following gene: 157963343

Centisome position: 83.36

GC content: 46.35

Gene sequence:

>999_bases
ATGCTAAACAGACTATTTAGTGCTGTTGTCATTCTCCTTTGTGGTCTTTCAAGTGTATCGGCAGCGCCGATACACTTGGT
CGATCAACAAGGCCGTGAGGTGGTTCTGCAAAAGCCTGCCTCACGTATTGTGACGACGTTTACACCTGCTAACCTATTTT
CTTTAAGCCTTGGGCTTGCAGATCAACTTGTTGGTATCGGTGGTAGCACCAAGCACTCTCCATTTATAAACCGTATTTTA
GCTGAGCGCGATCCAGTGGTGATCGGCAGTCGTTCGGCTGGAACGAGTTTAGAAACCATCGTCGCATTGAAGCCGGATCT
GGTTTTAGTCTTTGGTAAGAAAGACGGTTATAGATTGGCGGATCGCCTGACTTCTTTAGGCATTGCTAGCTTGGTTATCC
AACCTGAAAGTTTTAAAGATAGTGAAGTTGTGCTGTCGCTATTAGCGAAAGCCACGGGTACGGAAGACAAGGCGGCTAAG
ATAGCAGCTGAAAACCAACGTTTAGCCGAAATTATTCAAACAGGATTGAAAGGGCTTAGTGACGATCAACGCCTACGTGC
ATATTATGCTAATAGCTCAGATCTATACCGCACAGCGAGTGAACAGATGTTTCAGCATCAGCTGATGGCAGTTGCTGGAG
TAGAAAACGTTGCCACTGGCGTACCGGGTTTCTATCCAAAAGTGAATGCTGAGCAACTCCTGTTATGGCAGCCACAGGTG
CTGGTACGTGAGTCTAATGATTCAACTAAAGTGGATGAGCAACTGAACAAGTCACTGATGACCCAACTCGCTCAGTTGCC
GCACATCAAAATACCTAAAGGTAGCTTTTGGGATATGCCGTCACCGATGGCGATGGCGGGTGCTTTATATATTGCCGCGC
ATGCTTACCCTGAAAGATTTATAAACATCGATCTAAATGCCGAAATTGCCCATTACTATCAAGTGGCCTTTGGTGACGCT
TGCCTTTCACCGCTACAAGAGATGAGCCAATGTTTGTAG

Upstream 100 bases:

>100_bases
AAACAACCTACTCGATGAGTCGCACTACGAAGGATACGGTCAGCCAAACGAAGGCCGCTCTTATGAAGTGGGCGTAAAGT
ACCGCTTCTAAGGAGTCAGA

Downstream 100 bases:

>100_bases
CAAAAACACGCGCGATACAACCTGTGCAATGGCTCGGGATTGCCATTGTGGTTGGCTTAGTTGGTATTTGTGCTGGGCGC
TTCTCGATTAACCCAAGCGA

Product: periplasmic-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLNRLFSAVVILLCGLSSVSAAPIHLVDQQGREVVLQKPASRIVTTFTPANLFSLSLGLADQLVGIGGSTKHSPFINRIL
AERDPVVIGSRSAGTSLETIVALKPDLVLVFGKKDGYRLADRLTSLGIASLVIQPESFKDSEVVLSLLAKATGTEDKAAK
IAAENQRLAEIIQTGLKGLSDDQRLRAYYANSSDLYRTASEQMFQHQLMAVAGVENVATGVPGFYPKVNAEQLLLWQPQV
LVRESNDSTKVDEQLNKSLMTQLAQLPHIKIPKGSFWDMPSPMAMAGALYIAAHAYPERFINIDLNAEIAHYYQVAFGDA
CLSPLQEMSQCL

Sequences:

>Translated_332_residues
MLNRLFSAVVILLCGLSSVSAAPIHLVDQQGREVVLQKPASRIVTTFTPANLFSLSLGLADQLVGIGGSTKHSPFINRIL
AERDPVVIGSRSAGTSLETIVALKPDLVLVFGKKDGYRLADRLTSLGIASLVIQPESFKDSEVVLSLLAKATGTEDKAAK
IAAENQRLAEIIQTGLKGLSDDQRLRAYYANSSDLYRTASEQMFQHQLMAVAGVENVATGVPGFYPKVNAEQLLLWQPQV
LVRESNDSTKVDEQLNKSLMTQLAQLPHIKIPKGSFWDMPSPMAMAGALYIAAHAYPERFINIDLNAEIAHYYQVAFGDA
CLSPLQEMSQCL
>Mature_332_residues
MLNRLFSAVVILLCGLSSVSAAPIHLVDQQGREVVLQKPASRIVTTFTPANLFSLSLGLADQLVGIGGSTKHSPFINRIL
AERDPVVIGSRSAGTSLETIVALKPDLVLVFGKKDGYRLADRLTSLGIASLVIQPESFKDSEVVLSLLAKATGTEDKAAK
IAAENQRLAEIIQTGLKGLSDDQRLRAYYANSSDLYRTASEQMFQHQLMAVAGVENVATGVPGFYPKVNAEQLLLWQPQV
LVRESNDSTKVDEQLNKSLMTQLAQLPHIKIPKGSFWDMPSPMAMAGALYIAAHAYPERFINIDLNAEIAHYYQVAFGDA
CLSPLQEMSQCL

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786353, Length=199, Percent_Identity=28.643216080402, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 36096; Mature: 36096

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNRLFSAVVILLCGLSSVSAAPIHLVDQQGREVVLQKPASRIVTTFTPANLFSLSLGLA
CHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEHHCCHHHEEEEECCHHHHHHHHHHH
DQLVGIGGSTKHSPFINRILAERDPVVIGSRSAGTSLETIVALKPDLVLVFGKKDGYRLA
HHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHEEEEECCCEEEEEECCCCHHHH
DRLTSLGIASLVIQPESFKDSEVVLSLLAKATGTEDKAAKIAAENQRLAEIIQTGLKGLS
HHHHHCCHHHEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DDQRLRAYYANSSDLYRTASEQMFQHQLMAVAGVENVATGVPGFYPKVNAEQLLLWQPQV
CCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCE
LVRESNDSTKVDEQLNKSLMTQLAQLPHIKIPKGSFWDMPSPMAMAGALYIAAHAYPERF
EEECCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
INIDLNAEIAHYYQVAFGDACLSPLQEMSQCL
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNRLFSAVVILLCGLSSVSAAPIHLVDQQGREVVLQKPASRIVTTFTPANLFSLSLGLA
CHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCEEHHCCHHHEEEEECCHHHHHHHHHHH
DQLVGIGGSTKHSPFINRILAERDPVVIGSRSAGTSLETIVALKPDLVLVFGKKDGYRLA
HHHHCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCCHHEEEEECCCEEEEEECCCCHHHH
DRLTSLGIASLVIQPESFKDSEVVLSLLAKATGTEDKAAKIAAENQRLAEIIQTGLKGLS
HHHHHCCHHHEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
DDQRLRAYYANSSDLYRTASEQMFQHQLMAVAGVENVATGVPGFYPKVNAEQLLLWQPQV
CCHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCE
LVRESNDSTKVDEQLNKSLMTQLAQLPHIKIPKGSFWDMPSPMAMAGALYIAAHAYPERF
EEECCCCCCHHHHHHHHHHHHHHHHCCCEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCE
INIDLNAEIAHYYQVAFGDACLSPLQEMSQCL
EEEECCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]