| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963334
Identifier: 157963334
GI number: 157963334
Start: 4303710
End: 4305074
Strand: Reverse
Name: 157963334
Synonym: Spea_3520
Alternate gene names: NA
Gene position: 4305074-4303710 (Counterclockwise)
Preceding gene: 157963335
Following gene: 157963333
Centisome position: 83.2
GC content: 45.64
Gene sequence:
>1365_bases ATGAATTACCTCAAATTATCGGCACTAATGTTATTGCTGGTCTCAAGTCTCAGCCATGGGCAAGATGTGAATACTAGCGT TGGTCGGGATTTAAATCGATATGAGTCAGGTGTATTAAGTAAAGCGACTGCATTATTAGAACGTAATGAATTGGATGTCG CGCTTAAACTCATGATACCGCTACTTGAGCAATCAAAGCCTCACCAAGTCGTATTTCAATATGTATGTAAGACTCTAGGT GATACAGGTGCTGATACTAAGGCGCTAAGCTGCTGGCTGAGAGGCTATCAACTTTATCCGCAGCAAAGCCAAATCGCGAT TAATTTAGGCCATAGTCAATTACAGCTTGAGCAATATAAGGCGGCTATCGCGACATTAACCCGGCTGAAATTATCGATGC TAGATGAGCCTATTGCAGCGCAAATACGCTATATGCGAGGTTATGCTCATTATCAGTTAGGCCAATATCAAGCGGCAATT GATCTGTTGTACTCTGCAGATGTGAAACTACATTGGTGGCCTATTATTAGTTACAGTCAGCTTGCGCTTGAGCAATGGCA GCAGAGCAAAGTAAGTGCGCAGCAGTGGCTTACTTTTGAGCCCGCTAACCTTACTGCTTGGCAAGTATTAACTCGGGCTG AGCTAGGGTTAGATAATAAGCTTGAGGCTGCTGTTGCAAGTGATGTTTCTGCTCAGTTGCAAGGGCTGAGTAGTGCGAGC CGTAGCCTGCAAAATAGGTTTGGGCTATTTGGGCAGATTAAAGCCTATAATCTTGCGGCGTCTTGTACGTCATTAACTCT GACTGCGAATAGCTTGTCTTTCGAAGCGTTTGATACACAAGATTTAGCTTGCGCACAATATGCATGGCTATCGGGACGAT ATGATCAAGGGCTAGCTTTTTTACAAGCCTTTAATAGTGATAACTTACATGGCACTGCAGTTGACAGAGGTCGCTTAAAT CAAGGCAACCTCGGTCACGTTAGTTTCAAAGACACGAATCTCAATGACGATAATGACAGTATGAAAAGCTCACTTAGGTT AATAGACGATTTTTACCTGCTCCAAGGGCAGCTATATGCGGCGCTAAAACAGGGCGATAATGCGCGCAAGGCCTGGAGTA AAGTTGGTCAACAAATTCTGCCTTTGGGCACTGCAGCTGAGATCAAACACGCACGTCAGCGGCGTAATGAGCTGCAGGGG CAAGCACAGTTGTTAATTGGCCAGAGTTACTGGCTAGAGCAGCAATGGCCAGAGGCTCAGGCTAGTTACCGAAAGTTGGC GCAAACCCCTGGGTTTGAAACACTCGCCGCCGCTTTTGGGCAGCGTTTAGAGTCATTCACGCTGCGAGAAGATAAACTCA GGTGA
Upstream 100 bases:
>100_bases TTGAGGCTGCACGAAAGTGGCGATTTAAACCAGCCGTTTTATCTGGTGAAGCGGTGAAAGTCTTTGTTGATGTACCGATT AACTTTAAGGTTGGTTAACA
Downstream 100 bases:
>100_bases TCCAATATGATGGCTGTGGTAGCATCTGCGCCCAATTCATCCACATTTAGTTTTATTGAGCATACTTAGCAGGCCCACTG GCTAAGCTTGAGGCAATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 454; Mature: 454
Protein sequence:
>454_residues MNYLKLSALMLLLVSSLSHGQDVNTSVGRDLNRYESGVLSKATALLERNELDVALKLMIPLLEQSKPHQVVFQYVCKTLG DTGADTKALSCWLRGYQLYPQQSQIAINLGHSQLQLEQYKAAIATLTRLKLSMLDEPIAAQIRYMRGYAHYQLGQYQAAI DLLYSADVKLHWWPIISYSQLALEQWQQSKVSAQQWLTFEPANLTAWQVLTRAELGLDNKLEAAVASDVSAQLQGLSSAS RSLQNRFGLFGQIKAYNLAASCTSLTLTANSLSFEAFDTQDLACAQYAWLSGRYDQGLAFLQAFNSDNLHGTAVDRGRLN QGNLGHVSFKDTNLNDDNDSMKSSLRLIDDFYLLQGQLYAALKQGDNARKAWSKVGQQILPLGTAAEIKHARQRRNELQG QAQLLIGQSYWLEQQWPEAQASYRKLAQTPGFETLAAAFGQRLESFTLREDKLR
Sequences:
>Translated_454_residues MNYLKLSALMLLLVSSLSHGQDVNTSVGRDLNRYESGVLSKATALLERNELDVALKLMIPLLEQSKPHQVVFQYVCKTLG DTGADTKALSCWLRGYQLYPQQSQIAINLGHSQLQLEQYKAAIATLTRLKLSMLDEPIAAQIRYMRGYAHYQLGQYQAAI DLLYSADVKLHWWPIISYSQLALEQWQQSKVSAQQWLTFEPANLTAWQVLTRAELGLDNKLEAAVASDVSAQLQGLSSAS RSLQNRFGLFGQIKAYNLAASCTSLTLTANSLSFEAFDTQDLACAQYAWLSGRYDQGLAFLQAFNSDNLHGTAVDRGRLN QGNLGHVSFKDTNLNDDNDSMKSSLRLIDDFYLLQGQLYAALKQGDNARKAWSKVGQQILPLGTAAEIKHARQRRNELQG QAQLLIGQSYWLEQQWPEAQASYRKLAQTPGFETLAAAFGQRLESFTLREDKLR >Mature_454_residues MNYLKLSALMLLLVSSLSHGQDVNTSVGRDLNRYESGVLSKATALLERNELDVALKLMIPLLEQSKPHQVVFQYVCKTLG DTGADTKALSCWLRGYQLYPQQSQIAINLGHSQLQLEQYKAAIATLTRLKLSMLDEPIAAQIRYMRGYAHYQLGQYQAAI DLLYSADVKLHWWPIISYSQLALEQWQQSKVSAQQWLTFEPANLTAWQVLTRAELGLDNKLEAAVASDVSAQLQGLSSAS RSLQNRFGLFGQIKAYNLAASCTSLTLTANSLSFEAFDTQDLACAQYAWLSGRYDQGLAFLQAFNSDNLHGTAVDRGRLN QGNLGHVSFKDTNLNDDNDSMKSSLRLIDDFYLLQGQLYAALKQGDNARKAWSKVGQQILPLGTAAEIKHARQRRNELQG QAQLLIGQSYWLEQQWPEAQASYRKLAQTPGFETLAAAFGQRLESFTLREDKLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50825; Mature: 50825
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYLKLSALMLLLVSSLSHGQDVNTSVGRDLNRYESGVLSKATALLERNELDVALKLMIP CCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLEQSKPHQVVFQYVCKTLGDTGADTKALSCWLRGYQLYPQQSQIAINLGHSQLQLEQYK HHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHH AAIATLTRLKLSMLDEPIAAQIRYMRGYAHYQLGQYQAAIDLLYSADVKLHWWPIISYSQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH LALEQWQQSKVSAQQWLTFEPANLTAWQVLTRAELGLDNKLEAAVASDVSAQLQGLSSAS HHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RSLQNRFGLFGQIKAYNLAASCTSLTLTANSLSFEAFDTQDLACAQYAWLSGRYDQGLAF HHHHHHHCCCEEEEHHHHHHHHEEEEEEECCCEEEECCCCCHHHHHHHHHCCCCHHHHHH LQAFNSDNLHGTAVDRGRLNQGNLGHVSFKDTNLNDDNDSMKSSLRLIDDFYLLQGQLYA HHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALKQGDNARKAWSKVGQQILPLGTAAEIKHARQRRNELQGQAQLLIGQSYWLEQQWPEAQ HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHEEEECCHHHHCCCCCHHH ASYRKLAQTPGFETLAAAFGQRLESFTLREDKLR HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCC >Mature Secondary Structure MNYLKLSALMLLLVSSLSHGQDVNTSVGRDLNRYESGVLSKATALLERNELDVALKLMIP CCHHHHHHHHHHHHHHHCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH LLEQSKPHQVVFQYVCKTLGDTGADTKALSCWLRGYQLYPQQSQIAINLGHSQLQLEQYK HHHCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHH AAIATLTRLKLSMLDEPIAAQIRYMRGYAHYQLGQYQAAIDLLYSADVKLHWWPIISYSQ HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHH LALEQWQQSKVSAQQWLTFEPANLTAWQVLTRAELGLDNKLEAAVASDVSAQLQGLSSAS HHHHHHHHHHHHHHHCEEECCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH RSLQNRFGLFGQIKAYNLAASCTSLTLTANSLSFEAFDTQDLACAQYAWLSGRYDQGLAF HHHHHHHCCCEEEEHHHHHHHHEEEEEEECCCEEEECCCCCHHHHHHHHHCCCCHHHHHH LQAFNSDNLHGTAVDRGRLNQGNLGHVSFKDTNLNDDNDSMKSSLRLIDDFYLLQGQLYA HHHHCCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH ALKQGDNARKAWSKVGQQILPLGTAAEIKHARQRRNELQGQAQLLIGQSYWLEQQWPEAQ HHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHEEEECCHHHHCCCCCHHH ASYRKLAQTPGFETLAAAFGQRLESFTLREDKLR HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA