| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157963309
Identifier: 157963309
GI number: 157963309
Start: 4273937
End: 4274278
Strand: Reverse
Name: 157963309
Synonym: Spea_3495
Alternate gene names: NA
Gene position: 4274278-4273937 (Counterclockwise)
Preceding gene: 157963310
Following gene: 157963308
Centisome position: 82.6
GC content: 47.08
Gene sequence:
>342_bases ATGACACAAACTAAGAAGTATGATTTTCGCGTAGTCGCTGATGGCGCAACTTGGACCGGTCAGATCACTCGTCGTCAAAC GGCAAGAAAGATCGTTGTATCTAAGAGCAAGAAAGGTTTTGCCACTGAAGCAGAAGCGCAAGCTTGGGGCGAGACTGAGC TTAAGTCATTCTTAGAGAACTTGATTAAGCGTAACGAACGCAAGGCTAAGGCTCGTGGAGAGCGTAACGAAGCGGCTGAA GCTAAAGAGTTAGCTGCTGATGCATGGCGCAATGCGCGTCCAAGCAAAGAGTCTGGATTCGATGAAGATAACCTAGATTA TGAGTCTGACTCAGAAGGTTAA
Upstream 100 bases:
>100_bases AGCTATAACTATATCGGATTGGCTTCCCTCCTATGGGGCCTGCTAGGGTGTATAGTCTGTTTGGCTCAAGTATTAGAATT ATTGTTAGGATAAAAGTAAC
Downstream 100 bases:
>100_bases TCTTGCTTAGCAAGTCTATTTGTTTTAGCGATAGCTAAATAAATTGAGAAACCGCATTAAGCCTAGCTTGATGCGGTTTT TTTATATCCGTCATTCAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MTQTKKYDFRVVADGATWTGQITRRQTARKIVVSKSKKGFATEAEAQAWGETELKSFLENLIKRNERKAKARGERNEAAE AKELAADAWRNARPSKESGFDEDNLDYESDSEG
Sequences:
>Translated_113_residues MTQTKKYDFRVVADGATWTGQITRRQTARKIVVSKSKKGFATEAEAQAWGETELKSFLENLIKRNERKAKARGERNEAAE AKELAADAWRNARPSKESGFDEDNLDYESDSEG >Mature_112_residues TQTKKYDFRVVADGATWTGQITRRQTARKIVVSKSKKGFATEAEAQAWGETELKSFLENLIKRNERKAKARGERNEAAEA KELAADAWRNARPSKESGFDEDNLDYESDSEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12773; Mature: 12642
Theoretical pI: Translated: 8.96; Mature: 8.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQTKKYDFRVVADGATWTGQITRRQTARKIVVSKSKKGFATEAEAQAWGETELKSFLEN CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHH LIKRNERKAKARGERNEAAEAKELAADAWRNARPSKESGFDEDNLDYESDSEG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQTKKYDFRVVADGATWTGQITRRQTARKIVVSKSKKGFATEAEAQAWGETELKSFLEN CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHCCHHHHHHHHHH LIKRNERKAKARGERNEAAEAKELAADAWRNARPSKESGFDEDNLDYESDSEG HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA