| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963278
Identifier: 157963278
GI number: 157963278
Start: 4232651
End: 4235341
Strand: Reverse
Name: 157963278
Synonym: Spea_3464
Alternate gene names: NA
Gene position: 4235341-4232651 (Counterclockwise)
Preceding gene: 157963279
Following gene: 157963277
Centisome position: 81.85
GC content: 39.39
Gene sequence:
>2691_bases ATGTATCTTGCATTTAGTAATCCAAACCTCAACATCCGACTCGATAGGATATTAGTCCACAGCGAACAACTAGCTAATGA TATTGAGTTTTGTCACAAGCGTTATATGGCTAACAAAGCCAAATGGAACAAGACAGAGGTGACTATTGCATTACAGATTC GCTACATCTGCTCTAAATTTGAAAAACTAATAGACATACTTAACCCTGAATCATTAAAGGCATTGCTAGAACAAGGATTA TCGGCTCTTAAAAGCAATACCGTGTGGGATCTCCTTGAGTATGCAGCCCTAAGAACAGGCAAAGGGATTAAGAACGCATT TATAACACTGGTTAGGCTGTTCAATGACGATATTGACTTGAAGCCGCCAAGTAGAATAGACCTAAAGGGATACGTGACCG ATTTAGCGAAACTTTATGGTGCTTCCGATCTTCTTTTTAACCAATACCGCGACTTTATGTTTCACGTATTGGATACCGAC AGACCGCAAAAACAGCTAAGGGACATCAAGGCTAGTACTCACGCCACCCTTACCCAACTGATGAAAAAGGACAGCTATCG AGAACTGTTAGCAAAATATGGCTTAGGCGCATTTGTGAACAACACTGACATTCTGGCTGATGCAGCTAAAGTGGATAGTT ACAATTCCATTCACTTTCAGCTTATGTTGTCGCACTACGACTGTGAAACATTTATACAAAAGTCGGTAGTCGCGAAAGAC AAGTATGAGGTTAGTTTTACTGAGTTATACCGCACCTCTCAATCTCTGTTTAACGATATTGAACAGTATTCAAAAATTAT TGGTCACTCCATAAGTTCACACCTTAAACCAGCAAGTGTCCGTGACAAGCTTTTTGGATTCAAAAGAGCGTTACCGATTA TACAGGCAGAGCTCTCTGATAGTTTAAACTCGGCAATGCTAGCTGAAGGATTGAAGGCGTTATTAAATAGCGATGAAACA CTTAAGCGCCTTCATGACTCCCCCAATTTACCAAGTTGGATGTTTCTCTTAATACATGAAATCTGCACCTGTATTTACCC TGATAACACTCCTGAGCTAAATTCGTTTCGAGATAACTTGTTTTCATTTCCTAACATAGATAACAATCGTGAACTACTGT CTGACTTTTCAACCATTAAAGCCATTTCTGATACTCTTTACACAGACTTAGCCAATTTTCTTGAGTTATGCAAGGTAGAT ATCGACCTGAGGGATTACTCTATGGTCACAGTTTATCACAACTACCAACAACTAAAATCGCTCCTGAATAAGTACAGCGG AACACTGAACCACCAACACCTAGGTATCCTTAGACAACATGGTATTAATGGGTTTGGTATAGATGGAGGACTTACTCAAA ATCACCTCTTAGCTGAACTACAATCAAGCGTGAACAACGCTTCATTCAATAGGACAACTGCCAGAATATATAGAAGCAGC TTGTCATGGTTCTTGCGGGAGTTTGACATTCCGTTTAACAATATTTACCCAATCAAGAATACTAAAACCGTCAAACATAA ACAGCGCCTTAATACTGATGACTTCTACACAGAGCTACAGTGTCGAGAGTTGGCCTTTTATATTGAAAAACTATTACGCG ATGGCAGTACAAGCCTATATCACAGGATCTTACTTACCTTTGGTAAGGTAATACTGAAAACTGGATGGAACATTAGTCCG TTACTTAAGTTAGAATGTGACGACATTGCTGAGGTTGTATCTCCAATCACCAATAAAACCGAATATGCCGTTGTTCTTCA AAAAGCCAGAGCTGGCTATAGAAGCGACACATATACCTTTGACAAATCAGAGTTAAAATCAGATACCCTGAAAAGTGCAA TATCAGATTTGTTAATTATTCGCGATGAACTCACCACTGAGCTTAGGGCACAAACAAAGTTCAGTAATTACCTGTTTATC TACCCGCGCAATGATGAAGTGTTAAAACTTGAATACTCAACAGTAAAACACCTGAGCAGCATACTAAAGAAAGCAGGATG CAGTGTTCCATTTGTGGCTAAAAAAATCCGCAAAGGTGGTGTGAATCATATCTATCGAAAAGTTAATAAAAGCATCAAGA AGTACACCGATACGGTCAAACATTCTTTTGATGTGTTTGAGTCTAACTATTTGCGGATCAACCCTGAACAATCTCGCTAC TCTCTCAACCAAGCAACTAAAATAATGTCTGACTACTTTGCTGGCAAGGAAGTATCATCTGACATTCACATCATTACAGA CATGAGCGCTAATCAGCATCAAATAGTTCCTACCGGTACTTGTGCAGCGAAAGGTCAAAACGAAGAAGCAGAACGCTACG CTAGAGAGCATCGAAAACTACATCAAATTAATGAAGACAGTAATCAGAAAATGTGTGCAGATTTTCTTAGCTGCGTTTGG TGTAAGTATTTCCGTGTTGTCGTGGATGCCGAGCATGTATGGAAGCTACTCAGTTATAAGAACTACATATTACAAGATAT GGAAATGTCAGTTATTGACTTTGACAATACCGACAATCAGATCACCAATATCAATATTCTAAAACAACGCGTAGATGACA TTATTGAGAACCTACGAGAGAGAAACTGTAAAGCAGTAGAGGATGGTTTTGCGCTCTTTAAGCAACATGGCATTCATCCA GACTGGGAATTCGCCACCCCATCCTTTTCGATTGTTAATGGAGAGTCTTAA
Upstream 100 bases:
>100_bases TTATGACAAGCGCATGAAATCTTGGGTTGAGGATGTGTTTGGAGGTTTAGAGCAAGAGTTAAGCGTTGAAGTAACTGAGC TAGAGATAGGAGTTCGATAG
Downstream 100 bases:
>100_bases TGTCCGATCTCAATAAAATAATCTCAACCATCATAAATGTCAGCAACGATATCGTGGTAAAGGAATTATCTACCAGTGAT ATTAACGAACTATCTCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 896; Mature: 896
Protein sequence:
>896_residues MYLAFSNPNLNIRLDRILVHSEQLANDIEFCHKRYMANKAKWNKTEVTIALQIRYICSKFEKLIDILNPESLKALLEQGL SALKSNTVWDLLEYAALRTGKGIKNAFITLVRLFNDDIDLKPPSRIDLKGYVTDLAKLYGASDLLFNQYRDFMFHVLDTD RPQKQLRDIKASTHATLTQLMKKDSYRELLAKYGLGAFVNNTDILADAAKVDSYNSIHFQLMLSHYDCETFIQKSVVAKD KYEVSFTELYRTSQSLFNDIEQYSKIIGHSISSHLKPASVRDKLFGFKRALPIIQAELSDSLNSAMLAEGLKALLNSDET LKRLHDSPNLPSWMFLLIHEICTCIYPDNTPELNSFRDNLFSFPNIDNNRELLSDFSTIKAISDTLYTDLANFLELCKVD IDLRDYSMVTVYHNYQQLKSLLNKYSGTLNHQHLGILRQHGINGFGIDGGLTQNHLLAELQSSVNNASFNRTTARIYRSS LSWFLREFDIPFNNIYPIKNTKTVKHKQRLNTDDFYTELQCRELAFYIEKLLRDGSTSLYHRILLTFGKVILKTGWNISP LLKLECDDIAEVVSPITNKTEYAVVLQKARAGYRSDTYTFDKSELKSDTLKSAISDLLIIRDELTTELRAQTKFSNYLFI YPRNDEVLKLEYSTVKHLSSILKKAGCSVPFVAKKIRKGGVNHIYRKVNKSIKKYTDTVKHSFDVFESNYLRINPEQSRY SLNQATKIMSDYFAGKEVSSDIHIITDMSANQHQIVPTGTCAAKGQNEEAERYAREHRKLHQINEDSNQKMCADFLSCVW CKYFRVVVDAEHVWKLLSYKNYILQDMEMSVIDFDNTDNQITNINILKQRVDDIIENLRERNCKAVEDGFALFKQHGIHP DWEFATPSFSIVNGES
Sequences:
>Translated_896_residues MYLAFSNPNLNIRLDRILVHSEQLANDIEFCHKRYMANKAKWNKTEVTIALQIRYICSKFEKLIDILNPESLKALLEQGL SALKSNTVWDLLEYAALRTGKGIKNAFITLVRLFNDDIDLKPPSRIDLKGYVTDLAKLYGASDLLFNQYRDFMFHVLDTD RPQKQLRDIKASTHATLTQLMKKDSYRELLAKYGLGAFVNNTDILADAAKVDSYNSIHFQLMLSHYDCETFIQKSVVAKD KYEVSFTELYRTSQSLFNDIEQYSKIIGHSISSHLKPASVRDKLFGFKRALPIIQAELSDSLNSAMLAEGLKALLNSDET LKRLHDSPNLPSWMFLLIHEICTCIYPDNTPELNSFRDNLFSFPNIDNNRELLSDFSTIKAISDTLYTDLANFLELCKVD IDLRDYSMVTVYHNYQQLKSLLNKYSGTLNHQHLGILRQHGINGFGIDGGLTQNHLLAELQSSVNNASFNRTTARIYRSS LSWFLREFDIPFNNIYPIKNTKTVKHKQRLNTDDFYTELQCRELAFYIEKLLRDGSTSLYHRILLTFGKVILKTGWNISP LLKLECDDIAEVVSPITNKTEYAVVLQKARAGYRSDTYTFDKSELKSDTLKSAISDLLIIRDELTTELRAQTKFSNYLFI YPRNDEVLKLEYSTVKHLSSILKKAGCSVPFVAKKIRKGGVNHIYRKVNKSIKKYTDTVKHSFDVFESNYLRINPEQSRY SLNQATKIMSDYFAGKEVSSDIHIITDMSANQHQIVPTGTCAAKGQNEEAERYAREHRKLHQINEDSNQKMCADFLSCVW CKYFRVVVDAEHVWKLLSYKNYILQDMEMSVIDFDNTDNQITNINILKQRVDDIIENLRERNCKAVEDGFALFKQHGIHP DWEFATPSFSIVNGES >Mature_896_residues MYLAFSNPNLNIRLDRILVHSEQLANDIEFCHKRYMANKAKWNKTEVTIALQIRYICSKFEKLIDILNPESLKALLEQGL SALKSNTVWDLLEYAALRTGKGIKNAFITLVRLFNDDIDLKPPSRIDLKGYVTDLAKLYGASDLLFNQYRDFMFHVLDTD RPQKQLRDIKASTHATLTQLMKKDSYRELLAKYGLGAFVNNTDILADAAKVDSYNSIHFQLMLSHYDCETFIQKSVVAKD KYEVSFTELYRTSQSLFNDIEQYSKIIGHSISSHLKPASVRDKLFGFKRALPIIQAELSDSLNSAMLAEGLKALLNSDET LKRLHDSPNLPSWMFLLIHEICTCIYPDNTPELNSFRDNLFSFPNIDNNRELLSDFSTIKAISDTLYTDLANFLELCKVD IDLRDYSMVTVYHNYQQLKSLLNKYSGTLNHQHLGILRQHGINGFGIDGGLTQNHLLAELQSSVNNASFNRTTARIYRSS LSWFLREFDIPFNNIYPIKNTKTVKHKQRLNTDDFYTELQCRELAFYIEKLLRDGSTSLYHRILLTFGKVILKTGWNISP LLKLECDDIAEVVSPITNKTEYAVVLQKARAGYRSDTYTFDKSELKSDTLKSAISDLLIIRDELTTELRAQTKFSNYLFI YPRNDEVLKLEYSTVKHLSSILKKAGCSVPFVAKKIRKGGVNHIYRKVNKSIKKYTDTVKHSFDVFESNYLRINPEQSRY SLNQATKIMSDYFAGKEVSSDIHIITDMSANQHQIVPTGTCAAKGQNEEAERYAREHRKLHQINEDSNQKMCADFLSCVW CKYFRVVVDAEHVWKLLSYKNYILQDMEMSVIDFDNTDNQITNINILKQRVDDIIENLRERNCKAVEDGFALFKQHGIHP DWEFATPSFSIVNGES
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 103226; Mature: 103226
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLAFSNPNLNIRLDRILVHSEQLANDIEFCHKRYMANKAKWNKTEVTIALQIRYICSKF CEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHH EKLIDILNPESLKALLEQGLSALKSNTVWDLLEYAALRTGKGIKNAFITLVRLFNDDIDL HHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC KPPSRIDLKGYVTDLAKLYGASDLLFNQYRDFMFHVLDTDRPQKQLRDIKASTHATLTQL CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MKKDSYRELLAKYGLGAFVNNTDILADAAKVDSYNSIHFQLMLSHYDCETFIQKSVVAKD HHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCEEEEEEEHHCCHHHHHHHHHHHCC KYEVSFTELYRTSQSLFNDIEQYSKIIGHSISSHLKPASVRDKLFGFKRALPIIQAELSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SLNSAMLAEGLKALLNSDETLKRLHDSPNLPSWMFLLIHEICTCIYPDNTPELNSFRDNL HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FSFPNIDNNRELLSDFSTIKAISDTLYTDLANFLELCKVDIDLRDYSMVTVYHNYQQLKS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH LLNKYSGTLNHQHLGILRQHGINGFGIDGGLTQNHLLAELQSSVNNASFNRTTARIYRSS HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH LSWFLREFDIPFNNIYPIKNTKTVKHKQRLNTDDFYTELQCRELAFYIEKLLRDGSTSLY HHHHHHHHCCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH HRILLTFGKVILKTGWNISPLLKLECDDIAEVVSPITNKTEYAVVLQKARAGYRSDTYTF HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC DKSELKSDTLKSAISDLLIIRDELTTELRAQTKFSNYLFIYPRNDEVLKLEYSTVKHLSS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHH ILKKAGCSVPFVAKKIRKGGVNHIYRKVNKSIKKYTDTVKHSFDVFESNYLRINPEQSRY HHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHH SLNQATKIMSDYFAGKEVSSDIHIITDMSANQHQIVPTGTCAAKGQNEEAERYAREHRKL HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHH HQINEDSNQKMCADFLSCVWCKYFRVVVDAEHVWKLLSYKNYILQDMEMSVIDFDNTDNQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC ITNINILKQRVDDIIENLRERNCKAVEDGFALFKQHGIHPDWEFATPSFSIVNGES EEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCC >Mature Secondary Structure MYLAFSNPNLNIRLDRILVHSEQLANDIEFCHKRYMANKAKWNKTEVTIALQIRYICSKF CEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHHHHHHH EKLIDILNPESLKALLEQGLSALKSNTVWDLLEYAALRTGKGIKNAFITLVRLFNDDIDL HHHHHHCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCC KPPSRIDLKGYVTDLAKLYGASDLLFNQYRDFMFHVLDTDRPQKQLRDIKASTHATLTQL CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH MKKDSYRELLAKYGLGAFVNNTDILADAAKVDSYNSIHFQLMLSHYDCETFIQKSVVAKD HHHHHHHHHHHHCCCCCEECCCHHHHHHHHCCCCCCEEEEEEEHHCCHHHHHHHHHHHCC KYEVSFTELYRTSQSLFNDIEQYSKIIGHSISSHLKPASVRDKLFGFKRALPIIQAELSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SLNSAMLAEGLKALLNSDETLKRLHDSPNLPSWMFLLIHEICTCIYPDNTPELNSFRDNL HHHHHHHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH FSFPNIDNNRELLSDFSTIKAISDTLYTDLANFLELCKVDIDLRDYSMVTVYHNYQQLKS CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHH LLNKYSGTLNHQHLGILRQHGINGFGIDGGLTQNHLLAELQSSVNNASFNRTTARIYRSS HHHHHCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHH LSWFLREFDIPFNNIYPIKNTKTVKHKQRLNTDDFYTELQCRELAFYIEKLLRDGSTSLY HHHHHHHHCCCCCCEECCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHH HRILLTFGKVILKTGWNISPLLKLECDDIAEVVSPITNKTEYAVVLQKARAGYRSDTYTF HHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCC DKSELKSDTLKSAISDLLIIRDELTTELRAQTKFSNYLFIYPRNDEVLKLEYSTVKHLSS CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEHHHHHHHHH ILKKAGCSVPFVAKKIRKGGVNHIYRKVNKSIKKYTDTVKHSFDVFESNYLRINPEQSRY HHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHH SLNQATKIMSDYFAGKEVSSDIHIITDMSANQHQIVPTGTCAAKGQNEEAERYAREHRKL HHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEECCCCCCCCCCCCHHHHHHHHHHHHH HQINEDSNQKMCADFLSCVWCKYFRVVVDAEHVWKLLSYKNYILQDMEMSVIDFDNTDNQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCC ITNINILKQRVDDIIENLRERNCKAVEDGFALFKQHGIHPDWEFATPSFSIVNGES EEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA