Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

Click here to switch to the map view.

The map label for this gene is 157963271

Identifier: 157963271

GI number: 157963271

Start: 4225001

End: 4225207

Strand: Reverse

Name: 157963271

Synonym: Spea_3457

Alternate gene names: NA

Gene position: 4225207-4225001 (Counterclockwise)

Preceding gene: 157963274

Following gene: 157963270

Centisome position: 81.65

GC content: 40.1

Gene sequence:

>207_bases
ATGAAAGACTTAGCAATCCAATTTGGCTTCAATTTACGAAAAAAACGCAAAGAGTTGGGAATGTCTCAAGATAAATTGGC
GCTTTTAGCTGAAATAGATCGCAGTTATGGGGGGAGAATCGAGCGCGGAGAAGTCAATATCACGTTAGAAAAAGCTTATC
AGCTCGCTGAGGTATTAGAATGTGACGTCAGAGAGTTACTTCCATAA

Upstream 100 bases:

>100_bases
CTCTAGGGAGTAGAAAAACATTACAAACTAAATGCGGATTATAATCCGTGGCTTTATAAGCCGCAACTTTGGATAGTCTT
TATCTTTAACGAGATGAAAA

Downstream 100 bases:

>100_bases
GCTGATAAGGCCGAAAAGAATCTTCCTATAAAAACCTAAATAACTGTAACTCTTTACAGGTATAATGAACTTGATGAATC
AGACAGGTTTATTGATGCTA

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: RtrR Protein; DNA Methyltransferase; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Cro/CI Family Transcriptional Regulator; Restriction-

Number of amino acids: Translated: 68; Mature: 68

Protein sequence:

>68_residues
MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLECDVRELLP

Sequences:

>Translated_68_residues
MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLECDVRELLP
>Mature_68_residues
MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLECDVRELLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7824; Mature: 7824

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLE
CCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCEEEEEHHHHHHHHHHHH
CDVRELLP
HHHHHHCC
>Mature Secondary Structure
MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLE
CCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCEEEEEHHHHHHHHHHHH
CDVRELLP
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA