| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963271
Identifier: 157963271
GI number: 157963271
Start: 4225001
End: 4225207
Strand: Reverse
Name: 157963271
Synonym: Spea_3457
Alternate gene names: NA
Gene position: 4225207-4225001 (Counterclockwise)
Preceding gene: 157963274
Following gene: 157963270
Centisome position: 81.65
GC content: 40.1
Gene sequence:
>207_bases ATGAAAGACTTAGCAATCCAATTTGGCTTCAATTTACGAAAAAAACGCAAAGAGTTGGGAATGTCTCAAGATAAATTGGC GCTTTTAGCTGAAATAGATCGCAGTTATGGGGGGAGAATCGAGCGCGGAGAAGTCAATATCACGTTAGAAAAAGCTTATC AGCTCGCTGAGGTATTAGAATGTGACGTCAGAGAGTTACTTCCATAA
Upstream 100 bases:
>100_bases CTCTAGGGAGTAGAAAAACATTACAAACTAAATGCGGATTATAATCCGTGGCTTTATAAGCCGCAACTTTGGATAGTCTT TATCTTTAACGAGATGAAAA
Downstream 100 bases:
>100_bases GCTGATAAGGCCGAAAAGAATCTTCCTATAAAAACCTAAATAACTGTAACTCTTTACAGGTATAATGAACTTGATGAATC AGACAGGTTTATTGATGCTA
Product: XRE family transcriptional regulator
Products: NA
Alternate protein names: RtrR Protein; DNA Methyltransferase; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; Cro/CI Family Transcriptional Regulator; Restriction-
Number of amino acids: Translated: 68; Mature: 68
Protein sequence:
>68_residues MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLECDVRELLP
Sequences:
>Translated_68_residues MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLECDVRELLP >Mature_68_residues MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLECDVRELLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7824; Mature: 7824
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLE CCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCEEEEEHHHHHHHHHHHH CDVRELLP HHHHHHCC >Mature Secondary Structure MKDLAIQFGFNLRKKRKELGMSQDKLALLAEIDRSYGGRIERGEVNITLEKAYQLAEVLE CCCEEEECCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCEECCCEEEEEHHHHHHHHHHHH CDVRELLP HHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA