| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963254
Identifier: 157963254
GI number: 157963254
Start: 4205304
End: 4206134
Strand: Reverse
Name: 157963254
Synonym: Spea_3440
Alternate gene names: NA
Gene position: 4206134-4205304 (Counterclockwise)
Preceding gene: 157963256
Following gene: 157963251
Centisome position: 81.28
GC content: 46.45
Gene sequence:
>831_bases TTGAATTATCAATCAAAGCTATTCATTATTACGCTGGGGCTGTTAGCTTCTGGAGTGTCAACAAGTTCACTGGCGGCAGA TTGGCGCATCGCAATCGGTGCTCATGACACCATAGTCGATCAGGCAGACTCTCAAACATTAGGTCTTCACGGCGGATTCT TTGTCGAGCATAGATCGCAGTGGGATCTGCTGTGGAAAGGTGAAGTCGATATCTTTATCGATGACGATAAAGATAAGCTC GACCCCGATCATATTCCTATCTGGTTTCAAAGTGCTTTTTCTGTCGATGGAAACTTGTATCGTTTCTCGGAACTGATGAA CCTTCAGTGGCAAGTCAGCTTAAAGAGCAAGAGTAATACGGTGAGCTCGATAGAAAGGCAGGTGAAACTCTTTCCTGGCA TAGTGGCGAGATTCGATAATGACAGTGTTTACGCAGGCTTTGAGGTCGCTGCTGGTTATTACATGTTAGAAATTGACGAC GATGTGCCGAGGGATCGCGGCTATGATCGCGGTGATTTTCAAAATAAAACCGGGGCTTATTCAGTCGCATTCGATACTCG GTTGCCATTGGGGGATGGGGTCGATCTCTACGCCGGGGCGCAAACTTGGAATGATGGCAGCGATTGGTTGGAAAATAAGA TATCTGGCGTAGTGAGTTTTCACTCAGACCGCTGGATTGAAGGCAGTGAAATTAAGCTGAGCGTGGAGCACAGCGAGTAC AACCTCGACCCCTATGATAATAGAGATAAAACCTCACCTGATTATATGCCCATCTTACCTTGGGATAGAGATACCTTAGT CAGGATCTATGTGGACATGCCATGGGGTTAA
Upstream 100 bases:
>100_bases GATCTTAATGAACAGTATAAGATTTTACTGTTACCTAATAATTAGTTATTGCTATTCAGTTGGTTATGTTTTTATCTCTA GCAGAGGTGGGGGGAGATAA
Downstream 100 bases:
>100_bases CCGGCCGTGAAGGCTAGTAGGTAAACGTGAATACTCAAAAGTGAGCAGAAAAGCCATGGAGTCCATGGTTTTTTATTCGC TAAAATACTTAGATATATCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MNYQSKLFIITLGLLASGVSTSSLAADWRIAIGAHDTIVDQADSQTLGLHGGFFVEHRSQWDLLWKGEVDIFIDDDKDKL DPDHIPIWFQSAFSVDGNLYRFSELMNLQWQVSLKSKSNTVSSIERQVKLFPGIVARFDNDSVYAGFEVAAGYYMLEIDD DVPRDRGYDRGDFQNKTGAYSVAFDTRLPLGDGVDLYAGAQTWNDGSDWLENKISGVVSFHSDRWIEGSEIKLSVEHSEY NLDPYDNRDKTSPDYMPILPWDRDTLVRIYVDMPWG
Sequences:
>Translated_276_residues MNYQSKLFIITLGLLASGVSTSSLAADWRIAIGAHDTIVDQADSQTLGLHGGFFVEHRSQWDLLWKGEVDIFIDDDKDKL DPDHIPIWFQSAFSVDGNLYRFSELMNLQWQVSLKSKSNTVSSIERQVKLFPGIVARFDNDSVYAGFEVAAGYYMLEIDD DVPRDRGYDRGDFQNKTGAYSVAFDTRLPLGDGVDLYAGAQTWNDGSDWLENKISGVVSFHSDRWIEGSEIKLSVEHSEY NLDPYDNRDKTSPDYMPILPWDRDTLVRIYVDMPWG >Mature_276_residues MNYQSKLFIITLGLLASGVSTSSLAADWRIAIGAHDTIVDQADSQTLGLHGGFFVEHRSQWDLLWKGEVDIFIDDDKDKL DPDHIPIWFQSAFSVDGNLYRFSELMNLQWQVSLKSKSNTVSSIERQVKLFPGIVARFDNDSVYAGFEVAAGYYMLEIDD DVPRDRGYDRGDFQNKTGAYSVAFDTRLPLGDGVDLYAGAQTWNDGSDWLENKISGVVSFHSDRWIEGSEIKLSVEHSEY NLDPYDNRDKTSPDYMPILPWDRDTLVRIYVDMPWG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31373; Mature: 31373
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYQSKLFIITLGLLASGVSTSSLAADWRIAIGAHDTIVDQADSQTLGLHGGFFVEHRSQ CCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEECCCHHEECCCCCCEEECCCCEEEEECCC WDLLWKGEVDIFIDDDKDKLDPDHIPIWFQSAFSVDGNLYRFSELMNLQWQVSLKSKSNT EEEEEECCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEHHHCCEEEEEEECCCCCH VSSIERQVKLFPGIVARFDNDSVYAGFEVAAGYYMLEIDDDVPRDRGYDRGDFQNKTGAY HHHHHHHHHHCCCEEEEECCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCE SVAFDTRLPLGDGVDLYAGAQTWNDGSDWLENKISGVVSFHSDRWIEGSEIKLSVEHSEY EEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHEEEEECCCCCCCCCEEEEEEECCCC NLDPYDNRDKTSPDYMPILPWDRDTLVRIYVDMPWG CCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCC >Mature Secondary Structure MNYQSKLFIITLGLLASGVSTSSLAADWRIAIGAHDTIVDQADSQTLGLHGGFFVEHRSQ CCCCCEEEEEEEEHHHCCCCCCCCCCCEEEEECCCHHEECCCCCCEEECCCCEEEEECCC WDLLWKGEVDIFIDDDKDKLDPDHIPIWFQSAFSVDGNLYRFSELMNLQWQVSLKSKSNT EEEEEECCEEEEEECCCCCCCCCCCEEEEEEEECCCCCEEEEHHHCCEEEEEEECCCCCH VSSIERQVKLFPGIVARFDNDSVYAGFEVAAGYYMLEIDDDVPRDRGYDRGDFQNKTGAY HHHHHHHHHHCCCEEEEECCCCEEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCE SVAFDTRLPLGDGVDLYAGAQTWNDGSDWLENKISGVVSFHSDRWIEGSEIKLSVEHSEY EEEEECCCCCCCCCEEEECCCCCCCCHHHHHHHHHEEEEECCCCCCCCCEEEEEEECCCC NLDPYDNRDKTSPDYMPILPWDRDTLVRIYVDMPWG CCCCCCCCCCCCCCEEEECCCCCCEEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA