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The map label for this gene is 157963247

Identifier: 157963247

GI number: 157963247

Start: 4198741

End: 4199619

Strand: Reverse

Name: 157963247

Synonym: Spea_3433

Alternate gene names: NA

Gene position: 4199619-4198741 (Counterclockwise)

Preceding gene: 157963248

Following gene: 157963246

Centisome position: 81.16

GC content: 48.69

Gene sequence:

>879_bases
ATGAGCCTATTTAAATTTGGTCTATCCCCAGACAAGTCTGCCACCATTCGCCGTGAGTTAGGTCGTGATGCCGATGGCTA
CTTTGAGGCGATGCAGGTGGCCGAGAAAGCCTTTTTTAGCTCGATTATCACAGCGGATAATCGACTCAAACTCGACTGGT
TACAGCTACGCACAGACTTGAACACCCGTGTTGACGATAGAGAGTTATCTCGATTAAGAGATTTCAATGTTGAGTTGACT
CAAAATGTGTCGGCCAAGCTGAACGGTCAGATTCGGCAGGTTATCGTGGTCACGCCGGATTCTCTGACCGCGGCTGTTGC
CGATATTGAGGCGCAAACTTGCATCGGCTTCGATACTGAGACCGCAGCAACCTTTGAGAAGGGGCGGCGTAATCCTAATC
CTATCTCGTTGATCCAAATTGCGACGCCTACACACAGCTACCTGTTTCGTATGCAGGGTGAGAATATCGTTCCGTTTATG
GCTGCATTAGCGCCAATTTTGAGTGGCGATAAATTGCTGAAAGTGGGTATAGGCCTTAGGAGCGATCTTAATGCCATGAA
GCGAGACTTTGAGATAAGTGTTAACTCTATGCTGGATCTTAACTGGTTGATGAACCAACTCGGTGCGCCCAAGCAACTGG
GCACTCAACAGATGGCTGCCACTGTATTAGCCCTAAAGCTACCCAAGAGTAAAAAGGTCACCCTGTCTAACTGGGCTAAA
CCGTTAGCCGAGCCCTTGAGTGAGCTTCAGTTACAATATGCTGCGGCCGATGCCTTTGTGGCGCTAGATATTTTGTACGG
ATTACTCGAGCAGTTAAGGCCCTATAGGGCGCTGTGGCCATTACCCTTGCAGCAACGCTTAACAGACTTGTTTGAGTAA

Upstream 100 bases:

>100_bases
CACCCAGTAATTGTTTGATTTAACTGCATTCAAGTGCTTGGCATATCTAAGCACTCACTAGTTCTATAAACTAGCAAAAC
AACAGATATAGAGTATATCG

Downstream 100 bases:

>100_bases
CAGAGGGGATTTATTCCCTCATTATAGGATTTGACGCTATGTCGAAGAGAGAACCCGTGAAGCAGAATAGAGACGCGAAC
CCGATTAAGGGCATTTTATA

Product: 3'-5' exonuclease

Products: NA

Alternate protein names: 3-5' Exonuclease Domain Protein; 3- 5' Exonuclease Domain Protein; Ribonuclease D; 3 Exoribonuclease Family Protein; Exonuclease

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MSLFKFGLSPDKSATIRRELGRDADGYFEAMQVAEKAFFSSIITADNRLKLDWLQLRTDLNTRVDDRELSRLRDFNVELT
QNVSAKLNGQIRQVIVVTPDSLTAAVADIEAQTCIGFDTETAATFEKGRRNPNPISLIQIATPTHSYLFRMQGENIVPFM
AALAPILSGDKLLKVGIGLRSDLNAMKRDFEISVNSMLDLNWLMNQLGAPKQLGTQQMAATVLALKLPKSKKVTLSNWAK
PLAEPLSELQLQYAAADAFVALDILYGLLEQLRPYRALWPLPLQQRLTDLFE

Sequences:

>Translated_292_residues
MSLFKFGLSPDKSATIRRELGRDADGYFEAMQVAEKAFFSSIITADNRLKLDWLQLRTDLNTRVDDRELSRLRDFNVELT
QNVSAKLNGQIRQVIVVTPDSLTAAVADIEAQTCIGFDTETAATFEKGRRNPNPISLIQIATPTHSYLFRMQGENIVPFM
AALAPILSGDKLLKVGIGLRSDLNAMKRDFEISVNSMLDLNWLMNQLGAPKQLGTQQMAATVLALKLPKSKKVTLSNWAK
PLAEPLSELQLQYAAADAFVALDILYGLLEQLRPYRALWPLPLQQRLTDLFE
>Mature_291_residues
SLFKFGLSPDKSATIRRELGRDADGYFEAMQVAEKAFFSSIITADNRLKLDWLQLRTDLNTRVDDRELSRLRDFNVELTQ
NVSAKLNGQIRQVIVVTPDSLTAAVADIEAQTCIGFDTETAATFEKGRRNPNPISLIQIATPTHSYLFRMQGENIVPFMA
ALAPILSGDKLLKVGIGLRSDLNAMKRDFEISVNSMLDLNWLMNQLGAPKQLGTQQMAATVLALKLPKSKKVTLSNWAKP
LAEPLSELQLQYAAADAFVALDILYGLLEQLRPYRALWPLPLQQRLTDLFE

Specific function: Unknown

COG id: COG0349

COG function: function code J; Ribonuclease D

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32669; Mature: 32538

Theoretical pI: Translated: 7.36; Mature: 7.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLFKFGLSPDKSATIRRELGRDADGYFEAMQVAEKAFFSSIITADNRLKLDWLQLRTDL
CCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCC
NTRVDDRELSRLRDFNVELTQNVSAKLNGQIRQVIVVTPDSLTAAVADIEAQTCIGFDTE
CCCCCHHHHHHHHHCCCEEECCCCHHCCCCEEEEEEECCCCHHHHHHHCCHHHEECCCCH
TAATFEKGRRNPNPISLIQIATPTHSYLFRMQGENIVPFMAALAPILSGDKLLKVGIGLR
HHHHHHHCCCCCCCEEEEEEECCCCHHEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCH
SDLNAMKRDFEISVNSMLDLNWLMNQLGAPKQLGTQQMAATVLALKLPKSKKVTLSNWAK
HHHHHHHHHHEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
PLAEPLSELQLQYAAADAFVALDILYGLLEQLRPYRALWPLPLQQRLTDLFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure 
SLFKFGLSPDKSATIRRELGRDADGYFEAMQVAEKAFFSSIITADNRLKLDWLQLRTDL
CCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCC
NTRVDDRELSRLRDFNVELTQNVSAKLNGQIRQVIVVTPDSLTAAVADIEAQTCIGFDTE
CCCCCHHHHHHHHHCCCEEECCCCHHCCCCEEEEEEECCCCHHHHHHHCCHHHEECCCCH
TAATFEKGRRNPNPISLIQIATPTHSYLFRMQGENIVPFMAALAPILSGDKLLKVGIGLR
HHHHHHHCCCCCCCEEEEEEECCCCHHEEEECCCCCHHHHHHHHHHHCCCCEEEECCCCH
SDLNAMKRDFEISVNSMLDLNWLMNQLGAPKQLGTQQMAATVLALKLPKSKKVTLSNWAK
HHHHHHHHHHEEEHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCEEHHHHHH
PLAEPLSELQLQYAAADAFVALDILYGLLEQLRPYRALWPLPLQQRLTDLFE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA