| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963109
Identifier: 157963109
GI number: 157963109
Start: 4034878
End: 4035372
Strand: Reverse
Name: 157963109
Synonym: Spea_3293
Alternate gene names: NA
Gene position: 4035372-4034878 (Counterclockwise)
Preceding gene: 157963112
Following gene: 157963106
Centisome position: 77.98
GC content: 41.41
Gene sequence:
>495_bases ATGAAAACAATAAATATTACTTGGAAAGCGGGTGAAGAGTTTCATGAAGGTACAGCAGGGCTGACAGCTTGGCATGATTT TCAAGGGTACGGTAGTGTTGAATTTCTCACCCGAGAAGATCTGGCTATTGCTGATAGCATGCAGCAATGGTTCATAGATA ATGAAAAGCGTATTTATGCGCTTGTTTGTGATTATGTGAATGACAACTATCAAGAATTACTTGAAGACTCAGAGTTTTTA GATGTGTTTGACGAAGATTCAGAATCTTACGAAACCGGTGTTGGCGAGGTGAGCGAAGCCGATATGCAGGCTGGGGATAT CTTTAAGTTAATGCAGCTGTCCGGATTTATTTTACATCACCCAGACAAAAATGCAGTTGGGATGATTTTTGAATGTGCTT GGGATGAAGAGCATGGCTTTGGCATTGTGATCCAAGGTGACAGCATTATCTTGCAAGACGGTGCCCAAGTCGCGTATAGA AGCCTTAAATCATAA
Upstream 100 bases:
>100_bases CTTTCGCTTTGTTTTCTTTAGGAAAAATGCTCGTTTACGCCTTAACAGCACATTAATGTGAAACCGTTTCAATTATTATG CTCATTTTTGCGAGTTAATT
Downstream 100 bases:
>100_bases AACTAAGCAATCATAAAACCGAGCAATTATAAAACCGAACATAGACACCCTGAATGAATGCTCAGAATAAATGCCCTGAA TAACTTCGGGCTAAATGACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MKTINITWKAGEEFHEGTAGLTAWHDFQGYGSVEFLTREDLAIADSMQQWFIDNEKRIYALVCDYVNDNYQELLEDSEFL DVFDEDSESYETGVGEVSEADMQAGDIFKLMQLSGFILHHPDKNAVGMIFECAWDEEHGFGIVIQGDSIILQDGAQVAYR SLKS
Sequences:
>Translated_164_residues MKTINITWKAGEEFHEGTAGLTAWHDFQGYGSVEFLTREDLAIADSMQQWFIDNEKRIYALVCDYVNDNYQELLEDSEFL DVFDEDSESYETGVGEVSEADMQAGDIFKLMQLSGFILHHPDKNAVGMIFECAWDEEHGFGIVIQGDSIILQDGAQVAYR SLKS >Mature_164_residues MKTINITWKAGEEFHEGTAGLTAWHDFQGYGSVEFLTREDLAIADSMQQWFIDNEKRIYALVCDYVNDNYQELLEDSEFL DVFDEDSESYETGVGEVSEADMQAGDIFKLMQLSGFILHHPDKNAVGMIFECAWDEEHGFGIVIQGDSIILQDGAQVAYR SLKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18594; Mature: 18594
Theoretical pI: Translated: 3.89; Mature: 3.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTINITWKAGEEFHEGTAGLTAWHDFQGYGSVEFLTREDLAIADSMQQWFIDNEKRIYA CCEEEEEECCCCCHHCCCCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEE LVCDYVNDNYQELLEDSEFLDVFDEDSESYETGVGEVSEADMQAGDIFKLMQLSGFILHH EEEECCCCCHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCEEEEC PDKNAVGMIFECAWDEEHGFGIVIQGDSIILQDGAQVAYRSLKS CCCCCEEEEEEEECCCCCCEEEEEECCEEEEECCHHHHHHHHCC >Mature Secondary Structure MKTINITWKAGEEFHEGTAGLTAWHDFQGYGSVEFLTREDLAIADSMQQWFIDNEKRIYA CCEEEEEECCCCCHHCCCCCCEEEECCCCCCCEEEEECCCHHHHHHHHHHCCCCCCEEEE LVCDYVNDNYQELLEDSEFLDVFDEDSESYETGVGEVSEADMQAGDIFKLMQLSGFILHH EEEECCCCCHHHHHCCCCCEEEECCCCCHHHCCCCCCCCCCCCCCHHHHHHHHCCEEEEC PDKNAVGMIFECAWDEEHGFGIVIQGDSIILQDGAQVAYRSLKS CCCCCEEEEEEEECCCCCCEEEEEECCEEEEECCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA