| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is bax [H]
Identifier: 157963084
GI number: 157963084
Start: 4009692
End: 4010615
Strand: Reverse
Name: bax [H]
Synonym: Spea_3268
Alternate gene names: 157963084
Gene position: 4010615-4009692 (Counterclockwise)
Preceding gene: 157963085
Following gene: 157963083
Centisome position: 77.51
GC content: 45.78
Gene sequence:
>924_bases ATGTCCTTTGTAAAAATTTTTGCTAGTTTACTTTTGCTTGCTTCACCTTTTGTCTTGGCTAACCCAGTCTCCCTTAACCC GAGTCCCCCTTTGTCTCCAGAGCAGATTCAGCAGCCTTATCCAGAGGTAAGCATAACAAGGCTTCACTCGGCCAAAGAGC TTATTGCGGCCTTTGATACTCACGACTATCGGCTTAAGGTCGTTAAGCAAAGCAATATGTTGCCCAGTTACTTTGTTGAG AACCTGCCAAGTGATTTAAATGAGCTGCCCGTTTCACAAAAAACATCTGCTTTTATTCGGCTGCTGTTACCCACCATCAA GGCGGTAAACAGGGATATTTTACAGATTAGAGATGAATTACAAACACTGTCTGCTAAACCTAAATCCCAGTGGAGCGAGG CAGAGAGGCTTTGGTTACAGAGCTTAGCTGATACTTATGCGGTTAAGTCGGGGGCGATAGCAGAGTTACTCTTGCACATA GATGTTATTCCTGCGGGTATGGTGCTTGCTCAGGGCATAGATGAGAGCGGCTGGGGCACCAGTTATTTTGCCATCACGGG TAATAACCTCTATGGAGAGCATCTGCCCCATAATGGTGGCAAGTTTTTAACGACACCAGGCGGTCATGTCAAGGTGGCGG CATTTGATAACCTGTATCAGAGCACCGCAAGTTATATGCATAACCTTAATACCACCTTAGCTTATAAAGAGCTGAGGCAA TTACGCCAGCAATTACGCCTGCAAAAAAAGTTAACTGGCGATGAGCTAGTGCAATCTTTGCTGCATTATTCAACCCGTGG TCAGGCATATGTCGATAACCTGCGCGCGCTGATTAAGCGTCATCACCTAGATGATTTCGACTCTGCGAAATTAACTGAGA GTGACAGTATTCGCTACCGCTTTGCTCGTAGAGCTAAGGGTTAG
Upstream 100 bases:
>100_bases GACTAGGCTCAAAATAGTCTTTACTTTTTTTGGGGTATTTTGGGGGCTATTATATAGTCGCGTGACTTGGCTGATTTTCC TTTCAACAGAGAGAGCTCGA
Downstream 100 bases:
>100_bases TTTTTAATAAACAAGAAACAAAGAACCCTGCACAGACAGGGCTCTTTGTTTTAAAAGCTATAAACCACGAAGCGCTCACT TCGTTTGCTACACAGAGGAC
Product: BAX protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 307; Mature: 306
Protein sequence:
>307_residues MSFVKIFASLLLLASPFVLANPVSLNPSPPLSPEQIQQPYPEVSITRLHSAKELIAAFDTHDYRLKVVKQSNMLPSYFVE NLPSDLNELPVSQKTSAFIRLLLPTIKAVNRDILQIRDELQTLSAKPKSQWSEAERLWLQSLADTYAVKSGAIAELLLHI DVIPAGMVLAQGIDESGWGTSYFAITGNNLYGEHLPHNGGKFLTTPGGHVKVAAFDNLYQSTASYMHNLNTTLAYKELRQ LRQQLRLQKKLTGDELVQSLLHYSTRGQAYVDNLRALIKRHHLDDFDSAKLTESDSIRYRFARRAKG
Sequences:
>Translated_307_residues MSFVKIFASLLLLASPFVLANPVSLNPSPPLSPEQIQQPYPEVSITRLHSAKELIAAFDTHDYRLKVVKQSNMLPSYFVE NLPSDLNELPVSQKTSAFIRLLLPTIKAVNRDILQIRDELQTLSAKPKSQWSEAERLWLQSLADTYAVKSGAIAELLLHI DVIPAGMVLAQGIDESGWGTSYFAITGNNLYGEHLPHNGGKFLTTPGGHVKVAAFDNLYQSTASYMHNLNTTLAYKELRQ LRQQLRLQKKLTGDELVQSLLHYSTRGQAYVDNLRALIKRHHLDDFDSAKLTESDSIRYRFARRAKG >Mature_306_residues SFVKIFASLLLLASPFVLANPVSLNPSPPLSPEQIQQPYPEVSITRLHSAKELIAAFDTHDYRLKVVKQSNMLPSYFVEN LPSDLNELPVSQKTSAFIRLLLPTIKAVNRDILQIRDELQTLSAKPKSQWSEAERLWLQSLADTYAVKSGAIAELLLHID VIPAGMVLAQGIDESGWGTSYFAITGNNLYGEHLPHNGGKFLTTPGGHVKVAAFDNLYQSTASYMHNLNTTLAYKELRQL RQQLRLQKKLTGDELVQSLLHYSTRGQAYVDNLRALIKRHHLDDFDSAKLTESDSIRYRFARRAKG
Specific function: Unknown
COG id: COG2992
COG function: function code R; Uncharacterized FlgJ-related protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI48994948, Length=205, Percent_Identity=35.609756097561, Blast_Score=108, Evalue=5e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002901 [H]
Pfam domain/function: PF01832 Glucosaminidase [H]
EC number: NA
Molecular weight: Translated: 34469; Mature: 34338
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFVKIFASLLLLASPFVLANPVSLNPSPPLSPEQIQQPYPEVSITRLHSAKELIAAFDT CCHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC HDYRLKVVKQSNMLPSYFVENLPSDLNELPVSQKTSAFIRLLLPTIKAVNRDILQIRDEL CCEEEEEEECCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTLSAKPKSQWSEAERLWLQSLADTYAVKSGAIAELLLHIDVIPAGMVLAQGIDESGWGT HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SYFAITGNNLYGEHLPHNGGKFLTTPGGHVKVAAFDNLYQSTASYMHNLNTTLAYKELRQ EEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHH LRQQLRLQKKLTGDELVQSLLHYSTRGQAYVDNLRALIKRHHLDDFDSAKLTESDSIRYR HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH FARRAKG HHHHCCC >Mature Secondary Structure SFVKIFASLLLLASPFVLANPVSLNPSPPLSPEQIQQPYPEVSITRLHSAKELIAAFDT CHHHHHHHHHHHHCCHHHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHCC HDYRLKVVKQSNMLPSYFVENLPSDLNELPVSQKTSAFIRLLLPTIKAVNRDILQIRDEL CCEEEEEEECCCCCHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH QTLSAKPKSQWSEAERLWLQSLADTYAVKSGAIAELLLHIDVIPAGMVLAQGIDESGWGT HHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCC SYFAITGNNLYGEHLPHNGGKFLTTPGGHVKVAAFDNLYQSTASYMHNLNTTLAYKELRQ EEEEEECCCCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHH LRQQLRLQKKLTGDELVQSLLHYSTRGQAYVDNLRALIKRHHLDDFDSAKLTESDSIRYR HHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH FARRAKG HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503; 1544897 [H]