| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963048
Identifier: 157963048
GI number: 157963048
Start: 3960980
End: 3961939
Strand: Reverse
Name: 157963048
Synonym: Spea_3231
Alternate gene names: NA
Gene position: 3961939-3960980 (Counterclockwise)
Preceding gene: 157963049
Following gene: 157963046
Centisome position: 76.57
GC content: 44.27
Gene sequence:
>960_bases GTGCCTAGCTCTACAAAAGTGAGGCCTGCGGAGCTTAAACCAACGGAGGCAAAGTCTGTAGAAGTTAAGCATGAAGAAGT TAAAGCCAGCCTCGCCCCTGAAGATGACCCATGTTATAGCGAGTCACAGATGGAAGAGGCGATAGATAAAGCCTTCGATT ACCTCAATACTAAGTTTTGCCAACCTGCGATCTGGTTTGATAACTTTTTTGTTGATGACAGGATCGAAGAGGATGCGAGG GCTGGCACCATAGTTCGTTGGTATAACGACTTTTCGCACTATGAGAAGGAGGGCTTTAAATATCGGGCAAACCTCAATGC CAGATTGAATCTTCCCGGGGTGACAAAACGGTTAAAACTTATCTTTGATACGACTGGGGAAGACGATCCATTCGGCTTTA TTCGTTCGCCTGATGGTAATAATGAAACGGATATTGGTCTCAGGTATGACTGGTATGCGAAAGACCGGGTTAGTTTTAAC ATCAAGGCCAACTTTAAGCCAAAAATCGAAGCTAGATGGCGCTACACCTATCCGATTTCAGACAATACCGTTACCCGCTT AACTCAGAAGCTTTACCAAGAGAAGAAGGTCACCGGTGAATCAACCGAGTTTGATATTGAGCATGCGTTTAACGAGACTT TCGTTGCCCGCTGGAGTGCCGTCGCGCAATATGAGAATCGAGATAACGGTTGGGAGTTTGGTTCTAGTTTTAAGGTTTAT CAGTACATCAATAATAAACAGGCAATGAGTTATCAGGCCAGTATTTACGGTGTCGATGAGCCTTATCACTTCGTTAAAGA TGCCAGCATTAGCCTGACCTACAGGCAAAACTACGCCAGAGACTGGTTATTCTTCGCCATTACCCCTGAATATAATTGGA GTAAGGAGGATGAGTTTTCGATGCGGATCAATCAGTTCATCCTAACCTTTACTGTCGAAGTGTTATTTCAGAATGTGTAG
Upstream 100 bases:
>100_bases CATTAATGTCATATTCAGAGTGTCTAGCTTGTCGTTTAAGTGGCTGTTATTTATTGTTTTAGCCTTTCATTTTGCCCCTG CTTATGGGGGGGGGATACCT
Downstream 100 bases:
>100_bases TTCTAAGCAGGGATAGATAAGCATTAATTAGACTGCGTCGGGAGCTATGCTGCTGTCTTCTTCATCTGGGATTGCAGTCA CTGGATTGCTTGAGGGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MPSSTKVRPAELKPTEAKSVEVKHEEVKASLAPEDDPCYSESQMEEAIDKAFDYLNTKFCQPAIWFDNFFVDDRIEEDAR AGTIVRWYNDFSHYEKEGFKYRANLNARLNLPGVTKRLKLIFDTTGEDDPFGFIRSPDGNNETDIGLRYDWYAKDRVSFN IKANFKPKIEARWRYTYPISDNTVTRLTQKLYQEKKVTGESTEFDIEHAFNETFVARWSAVAQYENRDNGWEFGSSFKVY QYINNKQAMSYQASIYGVDEPYHFVKDASISLTYRQNYARDWLFFAITPEYNWSKEDEFSMRINQFILTFTVEVLFQNV
Sequences:
>Translated_319_residues MPSSTKVRPAELKPTEAKSVEVKHEEVKASLAPEDDPCYSESQMEEAIDKAFDYLNTKFCQPAIWFDNFFVDDRIEEDAR AGTIVRWYNDFSHYEKEGFKYRANLNARLNLPGVTKRLKLIFDTTGEDDPFGFIRSPDGNNETDIGLRYDWYAKDRVSFN IKANFKPKIEARWRYTYPISDNTVTRLTQKLYQEKKVTGESTEFDIEHAFNETFVARWSAVAQYENRDNGWEFGSSFKVY QYINNKQAMSYQASIYGVDEPYHFVKDASISLTYRQNYARDWLFFAITPEYNWSKEDEFSMRINQFILTFTVEVLFQNV >Mature_318_residues PSSTKVRPAELKPTEAKSVEVKHEEVKASLAPEDDPCYSESQMEEAIDKAFDYLNTKFCQPAIWFDNFFVDDRIEEDARA GTIVRWYNDFSHYEKEGFKYRANLNARLNLPGVTKRLKLIFDTTGEDDPFGFIRSPDGNNETDIGLRYDWYAKDRVSFNI KANFKPKIEARWRYTYPISDNTVTRLTQKLYQEKKVTGESTEFDIEHAFNETFVARWSAVAQYENRDNGWEFGSSFKVYQ YINNKQAMSYQASIYGVDEPYHFVKDASISLTYRQNYARDWLFFAITPEYNWSKEDEFSMRINQFILTFTVEVLFQNV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37598; Mature: 37467
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSSTKVRPAELKPTEAKSVEVKHEEVKASLAPEDDPCYSESQMEEAIDKAFDYLNTKFC CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QPAIWFDNFFVDDRIEEDARAGTIVRWYNDFSHYEKEGFKYRANLNARLNLPGVTKRLKL CCEEEECCEEECCCCCCCCCCCCEEEEEHHHHHHHHCCEEEEECCCEEECCCCCCEEEEE IFDTTGEDDPFGFIRSPDGNNETDIGLRYDWYAKDRVSFNIKANFKPKIEARWRYTYPIS EEECCCCCCCCCEEECCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCEEEEEEEEECCC DNTVTRLTQKLYQEKKVTGESTEFDIEHAFNETFVARWSAVAQYENRDNGWEFGSSFKVY CCHHHHHHHHHHHHHCCCCCCCEEEHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCEEEE QYINNKQAMSYQASIYGVDEPYHFVKDASISLTYRQNYARDWLFFAITPEYNWSKEDEFS EEECCCCCEEEEEEEEECCCCHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCHHH MRINQFILTFTVEVLFQNV HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PSSTKVRPAELKPTEAKSVEVKHEEVKASLAPEDDPCYSESQMEEAIDKAFDYLNTKFC CCCCCCCCCCCCCCCCCEEEEEHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC QPAIWFDNFFVDDRIEEDARAGTIVRWYNDFSHYEKEGFKYRANLNARLNLPGVTKRLKL CCEEEECCEEECCCCCCCCCCCCEEEEEHHHHHHHHCCEEEEECCCEEECCCCCCEEEEE IFDTTGEDDPFGFIRSPDGNNETDIGLRYDWYAKDRVSFNIKANFKPKIEARWRYTYPIS EEECCCCCCCCCEEECCCCCCCCCEEEEEEEEECCEEEEEEEECCCCCEEEEEEEEECCC DNTVTRLTQKLYQEKKVTGESTEFDIEHAFNETFVARWSAVAQYENRDNGWEFGSSFKVY CCHHHHHHHHHHHHHCCCCCCCEEEHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCEEEE QYINNKQAMSYQASIYGVDEPYHFVKDASISLTYRQNYARDWLFFAITPEYNWSKEDEFS EEECCCCCEEEEEEEEECCCCHHHHCCCEEEEEECCCCCCEEEEEEECCCCCCCCCCHHH MRINQFILTFTVEVLFQNV HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA