| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963042
Identifier: 157963042
GI number: 157963042
Start: 3953305
End: 3954198
Strand: Reverse
Name: 157963042
Synonym: Spea_3225
Alternate gene names: NA
Gene position: 3954198-3953305 (Counterclockwise)
Preceding gene: 157963043
Following gene: 157963041
Centisome position: 76.42
GC content: 37.36
Gene sequence:
>894_bases ATGCAGGATAATCCTGGCGAAGTTTATGTTCGTGATATGGTGATTGCTAATAATCAACTACTTATTCTTCAAGAATCTGA AGAGGTTAGCGTTCGAGATTTATCGGTCCTAATGACAGAGCTTGATAGTTATTATATACACCTAAATGGACGAAGTGTTG ACAGAATCAAGGCGGCAGATAGTGTGCAACTTTACGGTAGTGCTACTGATATTTTTGTCGCTTCAAGAGAAGTCGAACAG AGTAAATATAGTTTTTCGAGCATGAGTAAGTCGCTCGACTTTAATCATAATGTTTTAGCTTATGCCGATGAGAAACTAAA GCTATTTGATATTAGCAAAGGTAAGCTTGAACTAATTGAAGAGACTGATGTTGGTTATTCAGTTAACGTAAAACTTCAAG ATGACTTACTCTATAACAATATGGGGTTTGTTTTTAACACCGCAGCACAAGTTAATAAGCTAGATGTCGTGAGCGCCTTT GGCTCACATAACATTAGCACTACAGCCATTGTTCAGTCAGATTCTAATTTATATTATCTCTCGTCAGGCGAACTCTTTGC TTATGATAATAGTGACCCACAAAACCCACTTGCAATAGACAAGCTAGTTATCTCTGATTTGAATCATCCTGAGATTTATT ATTTTACCTCCCTTGCTGTCCACCAAGGACATATCTTTTTAGGTACATCGGGGCAAGGTTTATATCACTTGTATAATGAT GGTTCGCGTATTACAAACTTAGGCTCTTTTGGTGATAGTGAGATAATCTCTTCGCTTCATATTGTCGATTCATATTTGTA TCAAACCTATTATGGTGGCCTAAATATTTGGGATCTATCAAACTTAGACTCCCCCTTATTAGCTGCAAGTTACTCTGAGT TTTCAGGAGCCTGA
Upstream 100 bases:
>100_bases AATTCAAACCCATGGTCAGCAAGTTTACCTTGCTAATGGCAATAAGGTCATTCGTTATGATTTTAGTGACTTAGATAATG TCTCTCGCTCTTCAGTGTTG
Downstream 100 bases:
>100_bases ATAGGCTCATCAAATCCAACACATATGGATTTAGTCAATAATCGTTTATCTATTCAGTACGATGAGCAGTTTTGGTTAAT CGACGTTACACATCCTAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MQDNPGEVYVRDMVIANNQLLILQESEEVSVRDLSVLMTELDSYYIHLNGRSVDRIKAADSVQLYGSATDIFVASREVEQ SKYSFSSMSKSLDFNHNVLAYADEKLKLFDISKGKLELIEETDVGYSVNVKLQDDLLYNNMGFVFNTAAQVNKLDVVSAF GSHNISTTAIVQSDSNLYYLSSGELFAYDNSDPQNPLAIDKLVISDLNHPEIYYFTSLAVHQGHIFLGTSGQGLYHLYND GSRITNLGSFGDSEIISSLHIVDSYLYQTYYGGLNIWDLSNLDSPLLAASYSEFSGA
Sequences:
>Translated_297_residues MQDNPGEVYVRDMVIANNQLLILQESEEVSVRDLSVLMTELDSYYIHLNGRSVDRIKAADSVQLYGSATDIFVASREVEQ SKYSFSSMSKSLDFNHNVLAYADEKLKLFDISKGKLELIEETDVGYSVNVKLQDDLLYNNMGFVFNTAAQVNKLDVVSAF GSHNISTTAIVQSDSNLYYLSSGELFAYDNSDPQNPLAIDKLVISDLNHPEIYYFTSLAVHQGHIFLGTSGQGLYHLYND GSRITNLGSFGDSEIISSLHIVDSYLYQTYYGGLNIWDLSNLDSPLLAASYSEFSGA >Mature_297_residues MQDNPGEVYVRDMVIANNQLLILQESEEVSVRDLSVLMTELDSYYIHLNGRSVDRIKAADSVQLYGSATDIFVASREVEQ SKYSFSSMSKSLDFNHNVLAYADEKLKLFDISKGKLELIEETDVGYSVNVKLQDDLLYNNMGFVFNTAAQVNKLDVVSAF GSHNISTTAIVQSDSNLYYLSSGELFAYDNSDPQNPLAIDKLVISDLNHPEIYYFTSLAVHQGHIFLGTSGQGLYHLYND GSRITNLGSFGDSEIISSLHIVDSYLYQTYYGGLNIWDLSNLDSPLLAASYSEFSGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33057; Mature: 33057
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQDNPGEVYVRDMVIANNQLLILQESEEVSVRDLSVLMTELDSYYIHLNGRSVDRIKAAD CCCCCCCEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCC SVQLYGSATDIFVASREVEQSKYSFSSMSKSLDFNHNVLAYADEKLKLFDISKGKLELIE CEEEECCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEECCCCEEEEE ETDVGYSVNVKLQDDLLYNNMGFVFNTAAQVNKLDVVSAFGSHNISTTAIVQSDSNLYYL ECCCCEEEEEEEECCEEECCCCEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEE SSGELFAYDNSDPQNPLAIDKLVISDLNHPEIYYFTSLAVHQGHIFLGTSGQGLYHLYND ECCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEECC GSRITNLGSFGDSEIISSLHIVDSYLYQTYYGGLNIWDLSNLDSPLLAASYSEFSGA CCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHEECCHHHCCC >Mature Secondary Structure MQDNPGEVYVRDMVIANNQLLILQESEEVSVRDLSVLMTELDSYYIHLNGRSVDRIKAAD CCCCCCCEEEEEEEEECCEEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCEEECCC SVQLYGSATDIFVASREVEQSKYSFSSMSKSLDFNHNVLAYADEKLKLFDISKGKLELIE CEEEECCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEECCCCEEEEE ETDVGYSVNVKLQDDLLYNNMGFVFNTAAQVNKLDVVSAFGSHNISTTAIVQSDSNLYYL ECCCCEEEEEEEECCEEECCCCEEEECCCCCCEEEEEECCCCCCCEEEEEEECCCCEEEE SSGELFAYDNSDPQNPLAIDKLVISDLNHPEIYYFTSLAVHQGHIFLGTSGQGLYHLYND ECCCEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEEEEEECCEEEEECCCCCEEEEECC GSRITNLGSFGDSEIISSLHIVDSYLYQTYYGGLNIWDLSNLDSPLLAASYSEFSGA CCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHEECCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA