| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157963007
Identifier: 157963007
GI number: 157963007
Start: 3911915
End: 3912403
Strand: Reverse
Name: 157963007
Synonym: Spea_3190
Alternate gene names: NA
Gene position: 3912403-3911915 (Counterclockwise)
Preceding gene: 157963008
Following gene: 157963006
Centisome position: 75.61
GC content: 45.19
Gene sequence:
>489_bases ATGGCGTCATCTAACCGAACTGTTTTTAGATATATTTGTAGAGAGAAAGTGATGACAGAAGTAACTCAAGCTTATAGAGA TCGTGCTGAGCAAGTAGCGCTGAATGTATGTAACACAGTAATGCCGATGAACGACATTCCAGAGGGATTGTTCGAAGCTT ACGCCAACCTTTGCAACGAGCTAATCGAAGATACCGACCTTAAGTTCAGCGCCGGTTGGGATGCACTACCAGCCAGTGCT AAGGGCCTATTACCGAGAGAAGACTTCCACGGTTTCTACATTGCGAATGCTTGGTTCCAATTAAGCCGCGTAGCCCAAGA TATTGCAGAGATGGCTGAAACTGACGATGAGATCGCCGAGAAAGAGTACAACGGTATCTTCACTCGACTAGCAGATGCTT CGCTTAAAGAAAGCGTACGTAAGTTGAAGAAAGCCCGAACTGACCGTTCGATGCTTAATAGCATCAAAACAGTGATTGCT GGCAAATAA
Upstream 100 bases:
>100_bases ATAAAGGTATTACGGTAACGCCAATCGTCGGTAATGGTAATTATGGCTTATACGTAAGCGGCAAATTTTAACCTAGCAAT TGAATTGAGATAGGCGCTAT
Downstream 100 bases:
>100_bases GGTTTAGCTTTTTGCTAAAAAGTTTAATCAAAAAGGCTACAGGGTTTCTGTAGCCTTTTTTGTTGCTAGCAGATATAGCA ACTTTTTATCTTCGTGTAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MASSNRTVFRYICREKVMTEVTQAYRDRAEQVALNVCNTVMPMNDIPEGLFEAYANLCNELIEDTDLKFSAGWDALPASA KGLLPREDFHGFYIANAWFQLSRVAQDIAEMAETDDEIAEKEYNGIFTRLADASLKESVRKLKKARTDRSMLNSIKTVIA GK
Sequences:
>Translated_162_residues MASSNRTVFRYICREKVMTEVTQAYRDRAEQVALNVCNTVMPMNDIPEGLFEAYANLCNELIEDTDLKFSAGWDALPASA KGLLPREDFHGFYIANAWFQLSRVAQDIAEMAETDDEIAEKEYNGIFTRLADASLKESVRKLKKARTDRSMLNSIKTVIA GK >Mature_161_residues ASSNRTVFRYICREKVMTEVTQAYRDRAEQVALNVCNTVMPMNDIPEGLFEAYANLCNELIEDTDLKFSAGWDALPASAK GLLPREDFHGFYIANAWFQLSRVAQDIAEMAETDDEIAEKEYNGIFTRLADASLKESVRKLKKARTDRSMLNSIKTVIAG K
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18311; Mature: 18180
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASSNRTVFRYICREKVMTEVTQAYRDRAEQVALNVCNTVMPMNDIPEGLFEAYANLCNE CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LIEDTDLKFSAGWDALPASAKGLLPREDFHGFYIANAWFQLSRVAQDIAEMAETDDEIAE HHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH KEYNGIFTRLADASLKESVRKLKKARTDRSMLNSIKTVIAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure ASSNRTVFRYICREKVMTEVTQAYRDRAEQVALNVCNTVMPMNDIPEGLFEAYANLCNE CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH LIEDTDLKFSAGWDALPASAKGLLPREDFHGFYIANAWFQLSRVAQDIAEMAETDDEIAE HHHHCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHH KEYNGIFTRLADASLKESVRKLKKARTDRSMLNSIKTVIAGK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA