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The map label for this gene is nqrF [H]

Identifier: 157962915

GI number: 157962915

Start: 3800475

End: 3801722

Strand: Reverse

Name: nqrF [H]

Synonym: Spea_3098

Alternate gene names: 157962915

Gene position: 3801722-3800475 (Counterclockwise)

Preceding gene: 157962916

Following gene: 157962914

Centisome position: 73.47

GC content: 44.71

Gene sequence:

>1248_bases
ATGGGTATTCTTGAATCTACTCCAATCGATGTATATCTCGGTGTGAGTATGTTTACCGCGATTGTATTGGTTTTGGTTTT
GGTGATTTTATTCGCTAAATCTAAGCTAGTTGCAAGCGGCGATGTCACTATTGGCATCAACGATGACGCGAGTAAAGCAA
TTAAAACTGCAGCTGGTGGTAAGCTACTAGGTGCATTAGCAGAGAGCGGTATTTTCGTATCGTCTGCATGTGGTGGTGGT
GGTACTTGTGGTCAGTGTAAAGTGCACGTTAAATCAGGTGGTGGCGATATTCTACCAACTGAAATGGACCATATCAGCAA
AGGTGAAGCTCGTGGCGGTTGTCGTTTATCTTGTCAGGTAAACGTTAAAACTGACATGGAGATTGAGCTTGAAGAAGAGA
TCTTTGGTGTTAAGAAGTGGGAATGTACTGTTATCTCTAACGATAGCAAAGCAACCTTCATCAAAGAGCTTAAGCTGCAA
ATTCCTGATGGTGACTCTGTACCTTTCCGTGCGGGTGGTTACATTCAGATTGAAGCGCCTGCGCACCACGTTAAGTATGC
AGATTATGATATTCCTGCAGAATACCGTGGCGACTGGGAACACTTCGGTTTCTTCAACTTAGAATCAACCGTTGAAGACG
AAACAATCCGTGCATACTCTATGGCGAACTATCCTCTCGAGGAAGGTATCATCATGTTGAACGTACGTATTGCATCGCCG
CCGCCACGTAACCTATCTCTGCCTTGTGGTAAAATGTCATCGTACATCTTTAGCCTAAAAGCGGGTGATAAGGTGACCAT
TTCTGGTCCATTTGGTGAGTTCTTCGCTAAAGAAACCGATGCAGAAATGGTATTCATCGGTGGTGGTGCAGGTATGGCGC
CAATGCGATCGCATATCTTCGACCAGCTTAAGCGTCTTCACTCGAAGCGTAAGATGAGCTTCTGGTACGGTGCGCGTTCT
AGCCGTGAAATGTTCTATGTTGAAGATTTTGATGGCTTAGCGGCAGATAATGACAACTTCAAATGGCATGTTGCACTGTC
TGATCCACAGCCTGAAGACAACTGGGATGGATACACTGGCTTTATTCATAACGTATTGTATGAGAACTACTTACGTGACC
ATGAAGCACCAGAAGATTGTGAGTACTACATGTGTGGCCCACCAATGATGAACGCGGCTGTTATTAGCATGCTTAAAGAT
CTTGGTGTCGAAGATGAAAACATCCTGTTGGATGACTTCGGTGGCTAA

Upstream 100 bases:

>100_bases
CCGCTGGTTTGATGGCTCTAGGTTTCATGTCGTTCTCAGGTGTGTCTCTGTAAAGAGGCACCATAACGACGTCTTAATTT
GAACCTTTAAGGATAAGTTA

Downstream 100 bases:

>100_bases
CCCTTCTCTTATTGGAGATCTAGGTCAATATGTTTAAGACCTTAGTAAACTGGCTGGCCCTTATCGGGTTAGCCTTTTTT
ATTTCAGCTTGTACTAAACA

Product: Na(+)-translocating NADH-quinone reductase subunit F

Products: @TETR01txt*tetrahydropteridine!; NO3-; NAD(P); Proton [C]

Alternate protein names: Na(+)-NQR subunit F; Na(+)-translocating NQR subunit F; NQR complex subunit F; NQR-1 subunit F [H]

Number of amino acids: Translated: 415; Mature: 414

Protein sequence:

>415_residues
MGILESTPIDVYLGVSMFTAIVLVLVLVILFAKSKLVASGDVTIGINDDASKAIKTAAGGKLLGALAESGIFVSSACGGG
GTCGQCKVHVKSGGGDILPTEMDHISKGEARGGCRLSCQVNVKTDMEIELEEEIFGVKKWECTVISNDSKATFIKELKLQ
IPDGDSVPFRAGGYIQIEAPAHHVKYADYDIPAEYRGDWEHFGFFNLESTVEDETIRAYSMANYPLEEGIIMLNVRIASP
PPRNLSLPCGKMSSYIFSLKAGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIFDQLKRLHSKRKMSFWYGARS
SREMFYVEDFDGLAADNDNFKWHVALSDPQPEDNWDGYTGFIHNVLYENYLRDHEAPEDCEYYMCGPPMMNAAVISMLKD
LGVEDENILLDDFGG

Sequences:

>Translated_415_residues
MGILESTPIDVYLGVSMFTAIVLVLVLVILFAKSKLVASGDVTIGINDDASKAIKTAAGGKLLGALAESGIFVSSACGGG
GTCGQCKVHVKSGGGDILPTEMDHISKGEARGGCRLSCQVNVKTDMEIELEEEIFGVKKWECTVISNDSKATFIKELKLQ
IPDGDSVPFRAGGYIQIEAPAHHVKYADYDIPAEYRGDWEHFGFFNLESTVEDETIRAYSMANYPLEEGIIMLNVRIASP
PPRNLSLPCGKMSSYIFSLKAGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIFDQLKRLHSKRKMSFWYGARS
SREMFYVEDFDGLAADNDNFKWHVALSDPQPEDNWDGYTGFIHNVLYENYLRDHEAPEDCEYYMCGPPMMNAAVISMLKD
LGVEDENILLDDFGG
>Mature_414_residues
GILESTPIDVYLGVSMFTAIVLVLVLVILFAKSKLVASGDVTIGINDDASKAIKTAAGGKLLGALAESGIFVSSACGGGG
TCGQCKVHVKSGGGDILPTEMDHISKGEARGGCRLSCQVNVKTDMEIELEEEIFGVKKWECTVISNDSKATFIKELKLQI
PDGDSVPFRAGGYIQIEAPAHHVKYADYDIPAEYRGDWEHFGFFNLESTVEDETIRAYSMANYPLEEGIIMLNVRIASPP
PRNLSLPCGKMSSYIFSLKAGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIFDQLKRLHSKRKMSFWYGARSS
REMFYVEDFDGLAADNDNFKWHVALSDPQPEDNWDGYTGFIHNVLYENYLRDHEAPEDCEYYMCGPPMMNAAVISMLKDL
GVEDENILLDDFGG

Specific function: NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by nqrF, which accepts electrons from NADH and reduces

COG id: COG2871

COG function: function code C; Na+-transporting NADH:ubiquinone oxidoreductase, subunit NqrF

Gene ontology:

Cell location: Cell inner membrane (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding FR-type domain [H]

Homologues:

Organism=Saccharomyces cerevisiae, GI6323552, Length=191, Percent_Identity=26.1780104712042, Blast_Score=72, Evalue=2e-13,
Organism=Saccharomyces cerevisiae, GI6322146, Length=159, Percent_Identity=29.559748427673, Blast_Score=67, Evalue=5e-12,
Organism=Saccharomyces cerevisiae, GI6323510, Length=190, Percent_Identity=24.7368421052632, Blast_Score=67, Evalue=6e-12,

Paralogues:

None

Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012675
- InterPro:   IPR017927
- InterPro:   IPR001041
- InterPro:   IPR001709
- InterPro:   IPR010205
- InterPro:   IPR008333
- InterPro:   IPR001433
- InterPro:   IPR017938 [H]

Pfam domain/function: PF00970 FAD_binding_6; PF00111 Fer2; PF00175 NAD_binding_1 [H]

EC number: 1.5.1.34 [C]

Molecular weight: Translated: 45541; Mature: 45410

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGILESTPIDVYLGVSMFTAIVLVLVLVILFAKSKLVASGDVTIGINDDASKAIKTAAGG
CCCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHHCCC
KLLGALAESGIFVSSACGGGGTCGQCKVHVKSGGGDILPTEMDHISKGEARGGCRLSCQV
HHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEEE
NVKTDMEIELEEEIFGVKKWECTVISNDSKATFIKELKLQIPDGDSVPFRAGGYIQIEAP
EECCCCEEEEHHHHCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEECCCEEEEECC
AHHVKYADYDIPAEYRGDWEHFGFFNLESTVEDETIRAYSMANYPLEEGIIMLNVRIASP
CCEEEECCCCCCHHHCCCHHHCEEEECCCCCCCCCEEEEEECCCCHHCCEEEEEEEECCC
PPRNLSLPCGKMSSYIFSLKAGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIF
CCCCCCCCCCCCCCEEEEEECCCEEEEECCCHHHHCCCCCCCEEEEECCCCCHHHHHHHH
DQLKRLHSKRKMSFWYGARSSREMFYVEDFDGLAADNDNFKWHVALSDPQPEDNWDGYTG
HHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
FIHNVLYENYLRDHEAPEDCEYYMCGPPMMNAAVISMLKDLGVEDENILLDDFGG
HHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC
>Mature Secondary Structure 
GILESTPIDVYLGVSMFTAIVLVLVLVILFAKSKLVASGDVTIGINDDASKAIKTAAGG
CCCCCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCHHHHHHHHCCC
KLLGALAESGIFVSSACGGGGTCGQCKVHVKSGGGDILPTEMDHISKGEARGGCRLSCQV
HHHHHHHHCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCHHHCCCCCCCCCEEEEEEE
NVKTDMEIELEEEIFGVKKWECTVISNDSKATFIKELKLQIPDGDSVPFRAGGYIQIEAP
EECCCCEEEEHHHHCCCEEEEEEEEECCCCCEEEEEEEEECCCCCCCCEECCCEEEEECC
AHHVKYADYDIPAEYRGDWEHFGFFNLESTVEDETIRAYSMANYPLEEGIIMLNVRIASP
CCEEEECCCCCCHHHCCCHHHCEEEECCCCCCCCCEEEEEECCCCHHCCEEEEEEEECCC
PPRNLSLPCGKMSSYIFSLKAGDKVTISGPFGEFFAKETDAEMVFIGGGAGMAPMRSHIF
CCCCCCCCCCCCCCEEEEEECCCEEEEECCCHHHHCCCCCCCEEEEECCCCCHHHHHHHH
DQLKRLHSKRKMSFWYGARSSREMFYVEDFDGLAADNDNFKWHVALSDPQPEDNWDGYTG
HHHHHHHHHCCEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCHHH
FIHNVLYENYLRDHEAPEDCEYYMCGPPMMNAAVISMLKDLGVEDENILLDDFGG
HHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: FAD [C]

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dihydropteridine; 2 nitric oxide; O2; NAD(P)H [C]

Specific reaction: NAD(P)H + dihydropteridine = NAD(P)+ @TETR01.txt*tetrahydropteridine! 2 nitric oxide + 2 O2 + NAD(P)H = 2 NO3- + NAD(P) + Proton [C]

General reaction: Redox reaction [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA