| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962890
Identifier: 157962890
GI number: 157962890
Start: 3768172
End: 3768672
Strand: Reverse
Name: 157962890
Synonym: Spea_3072
Alternate gene names: NA
Gene position: 3768672-3768172 (Counterclockwise)
Preceding gene: 157962891
Following gene: 157962889
Centisome position: 72.83
GC content: 45.31
Gene sequence:
>501_bases GTGCAGTTATTGGTACGATTTGGATTCATTTTGTTATTCATAGGGGGGTTATTTCTCACGCCTATGTGTGCAAATGCGTC TGAGCAAAACCAAACTCATGTCGATGCATGGGAAGCTGAGCACGTTAATGACCAGCAACAAAGCCTTGGTTTAGCTGTGG CGGACATATTGCCAAGTCTAAGTACTTCTGGTGGAAATCCGGTCACGCTAAAAGATAATCATGCCCAGAAGAAGCAAAGT AATGACTCTGAGTATGCTCCTCTTGTATCTCAACGTTTTGTGAGTTTCTCTCAGCACGACCTACAACAAACACGTCCTGA TTATCTACTCGCATTTGAATTTGTCTCACCAGCGGTTCCATCTCTAACCGTTGGCTATCGCATAGATTTTGCGCCAGCCC TTGATTGGTTGCTGCATATCAAAAGCGCCTCCCATCGACTCTCCGCATGGAAAGAGTCCAATCTGCTCTATCGTTTCTCT CAAGCTCGCTCATTAGCCTAA
Upstream 100 bases:
>100_bases GAATTCGTTTGCTTTAGAGTTAAAATATTAAAAGGTTTGTATCTGCGTCATACAGTGTTTAGTATGTAATTCATAAACGA GACATATATTAGGAAGTTAA
Downstream 100 bases:
>100_bases GTTACATAAGCCTGTTTTGGCTTACCTATCGAGAATCTCCTTTACCTGTATAGAAGCTTAAGCTGCACGCTTGGTCGTGT GTTTACCTTCTTAAATATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 166; Mature: 166
Protein sequence:
>166_residues MQLLVRFGFILLFIGGLFLTPMCANASEQNQTHVDAWEAEHVNDQQQSLGLAVADILPSLSTSGGNPVTLKDNHAQKKQS NDSEYAPLVSQRFVSFSQHDLQQTRPDYLLAFEFVSPAVPSLTVGYRIDFAPALDWLLHIKSASHRLSAWKESNLLYRFS QARSLA
Sequences:
>Translated_166_residues MQLLVRFGFILLFIGGLFLTPMCANASEQNQTHVDAWEAEHVNDQQQSLGLAVADILPSLSTSGGNPVTLKDNHAQKKQS NDSEYAPLVSQRFVSFSQHDLQQTRPDYLLAFEFVSPAVPSLTVGYRIDFAPALDWLLHIKSASHRLSAWKESNLLYRFS QARSLA >Mature_166_residues MQLLVRFGFILLFIGGLFLTPMCANASEQNQTHVDAWEAEHVNDQQQSLGLAVADILPSLSTSGGNPVTLKDNHAQKKQS NDSEYAPLVSQRFVSFSQHDLQQTRPDYLLAFEFVSPAVPSLTVGYRIDFAPALDWLLHIKSASHRLSAWKESNLLYRFS QARSLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18546; Mature: 18546
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQLLVRFGFILLFIGGLFLTPMCANASEQNQTHVDAWEAEHVNDQQQSLGLAVADILPSL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH STSGGNPVTLKDNHAQKKQSNDSEYAPLVSQRFVSFSQHDLQQTRPDYLLAFEFVSPAVP CCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCC SLTVGYRIDFAPALDWLLHIKSASHRLSAWKESNLLYRFSQARSLA CEEECEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHCCC >Mature Secondary Structure MQLLVRFGFILLFIGGLFLTPMCANASEQNQTHVDAWEAEHVNDQQQSLGLAVADILPSL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHH STSGGNPVTLKDNHAQKKQSNDSEYAPLVSQRFVSFSQHDLQQTRPDYLLAFEFVSPAVP CCCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCCCC SLTVGYRIDFAPALDWLLHIKSASHRLSAWKESNLLYRFSQARSLA CEEECEEECHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA