| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962780
Identifier: 157962780
GI number: 157962780
Start: 3626414
End: 3626953
Strand: Reverse
Name: 157962780
Synonym: Spea_2962
Alternate gene names: NA
Gene position: 3626953-3626414 (Counterclockwise)
Preceding gene: 157962783
Following gene: 157962779
Centisome position: 70.09
GC content: 43.89
Gene sequence:
>540_bases ATGACAGTAAAAACCTTAATGACAACGCTTGTGCTGAGCGCTTTGTCTATCAATGCCTATGCGACAGATTTTACATTCGG TCTAAATGACGACATGTTGTCGACAGAGTTACAGTTTGATCTCAATAAAGACGTTAACGCATCCCTTGATTATATCTATG CCGATAAGGGAGGGCAGATGCTATCGGGTGCACTGCATATCGCCCATGACGCAGGTATTCATCACTTTGAATTGGGGGCT AAGTTTTCTCAAGTGTGGTCAAAGAAGAGTCAAAACGGTAACTTTGTTGGTATCGGCGGTCGCTACGCGATGCATTTAGG CTCGAATGTTTCTGTTCATGGTTCGGGATACTATTCACCATCGGTATTGTCCTTTGGTGATATTGACGGTTCGTGGCAGT TAGATGGTCGAGTGCAGTACAGTCTCAATCCCGCTCTAGCCCTGTTTGTGGGGTATCGCGATATTCGTTTACAGTATGAT CATGCATCTAATACTAGCTTAGACTCAGGATTTTATTTAGGCGCTAAAGCCTCTTTCTAA
Upstream 100 bases:
>100_bases CCGTGTTTATTTAAATGTACAGTCTAAGTTTAGGTTTCTATAAAAATGCGTCAGCCCTTTAGGTATGCTTGACGAAAGCT CATAAGTTTCGGGATCATAA
Downstream 100 bases:
>100_bases TTGTTTTCAGATATATAAAATCGGCTTAGGCAGGTATTTTATCCGCCTAAGTCACTTCCCCTGTTAGTGAGTTTGACACC TTTGAACTCACTTCGAGTCT
Product: YfaZ family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MTVKTLMTTLVLSALSINAYATDFTFGLNDDMLSTELQFDLNKDVNASLDYIYADKGGQMLSGALHIAHDAGIHHFELGA KFSQVWSKKSQNGNFVGIGGRYAMHLGSNVSVHGSGYYSPSVLSFGDIDGSWQLDGRVQYSLNPALALFVGYRDIRLQYD HASNTSLDSGFYLGAKASF
Sequences:
>Translated_179_residues MTVKTLMTTLVLSALSINAYATDFTFGLNDDMLSTELQFDLNKDVNASLDYIYADKGGQMLSGALHIAHDAGIHHFELGA KFSQVWSKKSQNGNFVGIGGRYAMHLGSNVSVHGSGYYSPSVLSFGDIDGSWQLDGRVQYSLNPALALFVGYRDIRLQYD HASNTSLDSGFYLGAKASF >Mature_178_residues TVKTLMTTLVLSALSINAYATDFTFGLNDDMLSTELQFDLNKDVNASLDYIYADKGGQMLSGALHIAHDAGIHHFELGAK FSQVWSKKSQNGNFVGIGGRYAMHLGSNVSVHGSGYYSPSVLSFGDIDGSWQLDGRVQYSLNPALALFVGYRDIRLQYDH ASNTSLDSGFYLGAKASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19480; Mature: 19349
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVKTLMTTLVLSALSINAYATDFTFGLNDDMLSTELQFDLNKDVNASLDYIYADKGGQM CCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCE LSGALHIAHDAGIHHFELGAKFSQVWSKKSQNGNFVGIGGRYAMHLGSNVSVHGSGYYSP EEEEEEEEECCCCEEEECCCHHHHHHHCCCCCCCEEEECCEEEEEECCCEEECCCCCCCC SVLSFGDIDGSWQLDGRVQYSLNPALALFVGYRDIRLQYDHASNTSLDSGFYLGAKASF CEEEECCCCCCEEECCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEECCC >Mature Secondary Structure TVKTLMTTLVLSALSINAYATDFTFGLNDDMLSTELQFDLNKDVNASLDYIYADKGGQM CHHHHHHHHHHHHHCCCEEEEEEEECCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCE LSGALHIAHDAGIHHFELGAKFSQVWSKKSQNGNFVGIGGRYAMHLGSNVSVHGSGYYSP EEEEEEEEECCCCEEEECCCHHHHHHHCCCCCCCEEEECCEEEEEECCCEEECCCCCCCC SVLSFGDIDGSWQLDGRVQYSLNPALALFVGYRDIRLQYDHASNTSLDSGFYLGAKASF CEEEECCCCCCEEECCEEEEECCCEEEEEEEEEEEEEEECCCCCCCCCCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA