| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962717
Identifier: 157962717
GI number: 157962717
Start: 3535569
End: 3535940
Strand: Reverse
Name: 157962717
Synonym: Spea_2898
Alternate gene names: NA
Gene position: 3535940-3535569 (Counterclockwise)
Preceding gene: 157962720
Following gene: 157962715
Centisome position: 68.33
GC content: 41.94
Gene sequence:
>372_bases GTGAAAAATAAATTATTAAGTTTAGCGTTTTTTGGGATTGCAAGCTTAGGGCTAACAGGCTGTGTGGTCAATCTCGGTGA TGGGGAATCTGGCTGGGATAATAATGGGTCATGGGAAAAAGTTCAGGAAAAAAATCGTGCTAACTTATCAAAAATCTCCT TGGGTATGTCTAAGGATCAAGTTGTGACCCTAATGGGAACCGCCGATTTTAACGAAGCCTATGTGCAGCAAAATAAAGAA GTGTATGTGCTTTTCTATCGTACCCAACGCACCCATGGTGATGGAAAAACGACAAAAGATGAATGTACGCCAGTGGTGAT CAGTAATAATACCGTAGTGGGGTGGGGGGAAATGGCTTATAGCAAGATCTAG
Upstream 100 bases:
>100_bases CTACTTAAATATAAATGTAAGTAAAAACAGTCGCTTGATGTTTGGCATGTTAATTGCTTTTTAAATAAAACTAAAAGCAA TGTTCATACAGGGAATTAAA
Downstream 100 bases:
>100_bases ATAAGCTTACTTTCTTAGCAAGGTGTCCAAGTGATCGATAACTTCCGACCATTGGGCATCTTGTGCTAGTGATTCAGCCA AGAAATGCTTTTGCGCTTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 123; Mature: 123
Protein sequence:
>123_residues MKNKLLSLAFFGIASLGLTGCVVNLGDGESGWDNNGSWEKVQEKNRANLSKISLGMSKDQVVTLMGTADFNEAYVQQNKE VYVLFYRTQRTHGDGKTTKDECTPVVISNNTVVGWGEMAYSKI
Sequences:
>Translated_123_residues MKNKLLSLAFFGIASLGLTGCVVNLGDGESGWDNNGSWEKVQEKNRANLSKISLGMSKDQVVTLMGTADFNEAYVQQNKE VYVLFYRTQRTHGDGKTTKDECTPVVISNNTVVGWGEMAYSKI >Mature_123_residues MKNKLLSLAFFGIASLGLTGCVVNLGDGESGWDNNGSWEKVQEKNRANLSKISLGMSKDQVVTLMGTADFNEAYVQQNKE VYVLFYRTQRTHGDGKTTKDECTPVVISNNTVVGWGEMAYSKI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13545; Mature: 13545
Theoretical pI: Translated: 7.25; Mature: 7.25
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKLLSLAFFGIASLGLTGCVVNLGDGESGWDNNGSWEKVQEKNRANLSKISLGMSKDQ CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCE VVTLMGTADFNEAYVQQNKEVYVLFYRTQRTHGDGKTTKDECTPVVISNNTVVGWGEMAY EEEEEECCCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCEEEEECHHHC SKI CCC >Mature Secondary Structure MKNKLLSLAFFGIASLGLTGCVVNLGDGESGWDNNGSWEKVQEKNRANLSKISLGMSKDQ CCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCHHHHHHHCCCCCEEEECCCCCCE VVTLMGTADFNEAYVQQNKEVYVLFYRTQRTHGDGKTTKDECTPVVISNNTVVGWGEMAY EEEEEECCCCCHHHHHCCCCEEEEEEEEEEECCCCCCCCCCCCEEEEECCEEEEECHHHC SKI CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA