| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962642
Identifier: 157962642
GI number: 157962642
Start: 3445085
End: 3446542
Strand: Reverse
Name: 157962642
Synonym: Spea_2822
Alternate gene names: NA
Gene position: 3446542-3445085 (Counterclockwise)
Preceding gene: 157962645
Following gene: 157962640
Centisome position: 66.61
GC content: 44.72
Gene sequence:
>1458_bases ATGCAGAGTTATGTTCGAATTGCGGGGCTGCTTTCATTTTTTATTTCAACATCTGGCTTCGCGCTTGAAGGGCTGAGCTT CTCACATGGTGATTGGCAAGTGGTCTGTGACAATACTAATACCTGTCGCGCAGTAGGCTATCACTCTTATATCCAAGAAC CGCAAGACAATAACAGTGCTCCGGTTTCAGTCATATTGCAAAGACAAGCAGGCGCTAATGCTCAGATCCAAGGCAAAGTA AAATTTGCTGAAGGCTCATATGATATTGATGGCCGTGAAGGCGGCAATGAAATTTTCAAACTGGTTATCAATGACTCATA CATGAGCCATTTAGGGCCTGAAATGCCGGCTTATGAAGAGCAAGGTATGCGGTTTAGTGGTGAGCGTGAACTTAGCCAAG ATCAAATTAGTCAGTTGCTCAATGCACTTACCATGAAAGGCCGTGTTTCGATAAAATTTACCAATAGTACGGGTAATGAG TGGCATTTATCGACCAGCGGCTCTACAGCTGTGTTGCTCAAAATGGACGATTTTCAAGGCTTGGTGGATACACCTTTCGG CATTGTAAAAAAAGGCCAGAGCATCGGCAATATCGTGCAGCCTAAACAAGCGCCTGTGATTTCAATTCCTCTGACTTCAG CATCAGTGCAGCAAGGGTCACTGACAACAGATAAAGACAGGCGATTGGCAACCGATCCAGAGTTTAAACTGAGGATGAAA AATGCAATCAATCAATGTGATTTTGTCCCCTCAGATAGTGATGACTTGAAACTTGAGGTATCTAGGCTGACAAAAACTCA ACTTGTGGTTACTGCACCTTGCTGGTCTGCAGCCTATAACTATGGTGACGGTGTGTGGCTTGTCGATGATAACCCAGCAA TAGAGCCTAAGTTCATTACCGATAGTTCGACAAATTACGCTAACGGTATTATTGATGAGTTTATGAAAGGACGCGGTATC GCCGATTGTGTTTCGGCAAAGCGGTTAATTTGGAACGGTAGTGATTTTATTTTAGCAGACGATTATTCAACAGGGGATTG TCGTGAGATAGCCATGGGGGGCGCGTGGTATCTGCCGACTCAAGTCAGTACTGTGATTTTAGGTGATGATCCCGCAGCCG GAATCGATTGCCAATCTGAGCAAGCATACAACACTGAGGGGATGACTAAGTGTGGTCAGCTAGAGTTAGCGAATGTCGAA TGGAAACTCACCGAGGTTATTAAATCTATTAGTGCCCTTGAGCACGTGGCAAATAATAGCGAGTTAAGCACCGCTTATGG TCAGGCGCAATCCTCTTGGTTAAGCTATCGTAATGATGCATGTAGGGCTGAGATGCTGACATATGAACAAGGTTCGATGG CGATCCCAGTCTTGATAGGCTGCAAGCTTGATTTGACGGAAAAGCGTCTAAAGGAGCTTCAGTTAACGAAAGAGTCGCTT AGTTTCCGTGATTATTGA
Upstream 100 bases:
>100_bases CTGCTACTTAATTGCAGTAAGTAATGACACTATCTGGCGTTGTCATCATTTTTCGTTGTAGACCATTTTATTAAGTCGTT ACTTTGGGAGCATTTTAATA
Downstream 100 bases:
>100_bases GCATTAGTTTAGACCAGCAACATAATCTAAATCATTTTGCTTTATATCATGCTTGTGTTTTCAGAGGGGGGGATTTGCTG CTGCCCCTCTGTAATAGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 485; Mature: 485
Protein sequence:
>485_residues MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSAPVSVILQRQAGANAQIQGKV KFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEEQGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNE WHLSTSGSTAVLLKMDDFQGLVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFITDSSTNYANGIIDEFMKGRGI ADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPTQVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVE WKLTEVIKSISALEHVANNSELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL SFRDY
Sequences:
>Translated_485_residues MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSAPVSVILQRQAGANAQIQGKV KFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEEQGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNE WHLSTSGSTAVLLKMDDFQGLVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFITDSSTNYANGIIDEFMKGRGI ADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPTQVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVE WKLTEVIKSISALEHVANNSELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL SFRDY >Mature_485_residues MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSAPVSVILQRQAGANAQIQGKV KFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEEQGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNE WHLSTSGSTAVLLKMDDFQGLVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFITDSSTNYANGIIDEFMKGRGI ADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPTQVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVE WKLTEVIKSISALEHVANNSELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL SFRDY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53318; Mature: 53318
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSA CCHHHHHHHHHHHHHCCCCCEEECCEECCCCEEEEECCCCCEEEECCHHHHCCCCCCCCC PVSVILQRQAGANAQIQGKVKFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEE CEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCHHH QGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNEWHLSTSGSTAVLLKMDDFQG CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCC LVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK CCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFIT HHHHHCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHCCCCCEEEEECCCCCCCCEEEC DSSTNYANGIIDEFMKGRGIADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPT CCCCCHHHHHHHHHHHCCCHHHHHHCCCEEECCCCEEEECCCCCCCHHHHHCCCEEEECC QVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVEWKLTEVIKSISALEHVANNS CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC ELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL CHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCEEEEEEEECEECHHHHHHHHHHHHHHHC SFRDY CCCCC >Mature Secondary Structure MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSA CCHHHHHHHHHHHHHCCCCCEEECCEECCCCEEEEECCCCCEEEECCHHHHCCCCCCCCC PVSVILQRQAGANAQIQGKVKFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEE CEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCHHH QGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNEWHLSTSGSTAVLLKMDDFQG CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCC LVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK CCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFIT HHHHHCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHCCCCCEEEEECCCCCCCCEEEC DSSTNYANGIIDEFMKGRGIADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPT CCCCCHHHHHHHHHHHCCCHHHHHHCCCEEECCCCEEEECCCCCCCHHHHHCCCEEEECC QVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVEWKLTEVIKSISALEHVANNS CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC ELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL CHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCEEEEEEEECEECHHHHHHHHHHHHHHHC SFRDY CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA