Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962642

Identifier: 157962642

GI number: 157962642

Start: 3445085

End: 3446542

Strand: Reverse

Name: 157962642

Synonym: Spea_2822

Alternate gene names: NA

Gene position: 3446542-3445085 (Counterclockwise)

Preceding gene: 157962645

Following gene: 157962640

Centisome position: 66.61

GC content: 44.72

Gene sequence:

>1458_bases
ATGCAGAGTTATGTTCGAATTGCGGGGCTGCTTTCATTTTTTATTTCAACATCTGGCTTCGCGCTTGAAGGGCTGAGCTT
CTCACATGGTGATTGGCAAGTGGTCTGTGACAATACTAATACCTGTCGCGCAGTAGGCTATCACTCTTATATCCAAGAAC
CGCAAGACAATAACAGTGCTCCGGTTTCAGTCATATTGCAAAGACAAGCAGGCGCTAATGCTCAGATCCAAGGCAAAGTA
AAATTTGCTGAAGGCTCATATGATATTGATGGCCGTGAAGGCGGCAATGAAATTTTCAAACTGGTTATCAATGACTCATA
CATGAGCCATTTAGGGCCTGAAATGCCGGCTTATGAAGAGCAAGGTATGCGGTTTAGTGGTGAGCGTGAACTTAGCCAAG
ATCAAATTAGTCAGTTGCTCAATGCACTTACCATGAAAGGCCGTGTTTCGATAAAATTTACCAATAGTACGGGTAATGAG
TGGCATTTATCGACCAGCGGCTCTACAGCTGTGTTGCTCAAAATGGACGATTTTCAAGGCTTGGTGGATACACCTTTCGG
CATTGTAAAAAAAGGCCAGAGCATCGGCAATATCGTGCAGCCTAAACAAGCGCCTGTGATTTCAATTCCTCTGACTTCAG
CATCAGTGCAGCAAGGGTCACTGACAACAGATAAAGACAGGCGATTGGCAACCGATCCAGAGTTTAAACTGAGGATGAAA
AATGCAATCAATCAATGTGATTTTGTCCCCTCAGATAGTGATGACTTGAAACTTGAGGTATCTAGGCTGACAAAAACTCA
ACTTGTGGTTACTGCACCTTGCTGGTCTGCAGCCTATAACTATGGTGACGGTGTGTGGCTTGTCGATGATAACCCAGCAA
TAGAGCCTAAGTTCATTACCGATAGTTCGACAAATTACGCTAACGGTATTATTGATGAGTTTATGAAAGGACGCGGTATC
GCCGATTGTGTTTCGGCAAAGCGGTTAATTTGGAACGGTAGTGATTTTATTTTAGCAGACGATTATTCAACAGGGGATTG
TCGTGAGATAGCCATGGGGGGCGCGTGGTATCTGCCGACTCAAGTCAGTACTGTGATTTTAGGTGATGATCCCGCAGCCG
GAATCGATTGCCAATCTGAGCAAGCATACAACACTGAGGGGATGACTAAGTGTGGTCAGCTAGAGTTAGCGAATGTCGAA
TGGAAACTCACCGAGGTTATTAAATCTATTAGTGCCCTTGAGCACGTGGCAAATAATAGCGAGTTAAGCACCGCTTATGG
TCAGGCGCAATCCTCTTGGTTAAGCTATCGTAATGATGCATGTAGGGCTGAGATGCTGACATATGAACAAGGTTCGATGG
CGATCCCAGTCTTGATAGGCTGCAAGCTTGATTTGACGGAAAAGCGTCTAAAGGAGCTTCAGTTAACGAAAGAGTCGCTT
AGTTTCCGTGATTATTGA

Upstream 100 bases:

>100_bases
CTGCTACTTAATTGCAGTAAGTAATGACACTATCTGGCGTTGTCATCATTTTTCGTTGTAGACCATTTTATTAAGTCGTT
ACTTTGGGAGCATTTTAATA

Downstream 100 bases:

>100_bases
GCATTAGTTTAGACCAGCAACATAATCTAAATCATTTTGCTTTATATCATGCTTGTGTTTTCAGAGGGGGGGATTTGCTG
CTGCCCCTCTGTAATAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 485; Mature: 485

Protein sequence:

>485_residues
MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSAPVSVILQRQAGANAQIQGKV
KFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEEQGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNE
WHLSTSGSTAVLLKMDDFQGLVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK
NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFITDSSTNYANGIIDEFMKGRGI
ADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPTQVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVE
WKLTEVIKSISALEHVANNSELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL
SFRDY

Sequences:

>Translated_485_residues
MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSAPVSVILQRQAGANAQIQGKV
KFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEEQGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNE
WHLSTSGSTAVLLKMDDFQGLVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK
NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFITDSSTNYANGIIDEFMKGRGI
ADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPTQVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVE
WKLTEVIKSISALEHVANNSELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL
SFRDY
>Mature_485_residues
MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSAPVSVILQRQAGANAQIQGKV
KFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEEQGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNE
WHLSTSGSTAVLLKMDDFQGLVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK
NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFITDSSTNYANGIIDEFMKGRGI
ADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPTQVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVE
WKLTEVIKSISALEHVANNSELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL
SFRDY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53318; Mature: 53318

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSA
CCHHHHHHHHHHHHHCCCCCEEECCEECCCCEEEEECCCCCEEEECCHHHHCCCCCCCCC
PVSVILQRQAGANAQIQGKVKFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEE
CEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCHHH
QGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNEWHLSTSGSTAVLLKMDDFQG
CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCC
LVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK
CCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFIT
HHHHHCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHCCCCCEEEEECCCCCCCCEEEC
DSSTNYANGIIDEFMKGRGIADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPT
CCCCCHHHHHHHHHHHCCCHHHHHHCCCEEECCCCEEEECCCCCCCHHHHHCCCEEEECC
QVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVEWKLTEVIKSISALEHVANNS
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC
ELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL
CHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCEEEEEEEECEECHHHHHHHHHHHHHHHC
SFRDY
CCCCC
>Mature Secondary Structure
MQSYVRIAGLLSFFISTSGFALEGLSFSHGDWQVVCDNTNTCRAVGYHSYIQEPQDNNSA
CCHHHHHHHHHHHHHCCCCCEEECCEECCCCEEEEECCCCCEEEECCHHHHCCCCCCCCC
PVSVILQRQAGANAQIQGKVKFAEGSYDIDGREGGNEIFKLVINDSYMSHLGPEMPAYEE
CEEEEEEECCCCCCEEEEEEEEECCCCCCCCCCCCCEEEEEEECCCHHHHCCCCCCCHHH
QGMRFSGERELSQDQISQLLNALTMKGRVSIKFTNSTGNEWHLSTSGSTAVLLKMDDFQG
CCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCCCCEEEEECCCCEEEEEEECCCCC
LVDTPFGIVKKGQSIGNIVQPKQAPVISIPLTSASVQQGSLTTDKDRRLATDPEFKLRMK
CCCCCHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHH
NAINQCDFVPSDSDDLKLEVSRLTKTQLVVTAPCWSAAYNYGDGVWLVDDNPAIEPKFIT
HHHHHCCCCCCCCCCCEEEEEECCEEEEEEECCHHHHHCCCCCEEEEECCCCCCCCEEEC
DSSTNYANGIIDEFMKGRGIADCVSAKRLIWNGSDFILADDYSTGDCREIAMGGAWYLPT
CCCCCHHHHHHHHHHHCCCHHHHHHCCCEEECCCCEEEECCCCCCCHHHHHCCCEEEECC
QVSTVILGDDPAAGIDCQSEQAYNTEGMTKCGQLELANVEWKLTEVIKSISALEHVANNS
CEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCCCC
ELSTAYGQAQSSWLSYRNDACRAEMLTYEQGSMAIPVLIGCKLDLTEKRLKELQLTKESL
CHHHHHHHHHHHHHHHCCCCHHHHEEEECCCCEEEEEEEECEECHHHHHHHHHHHHHHHC
SFRDY
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA