| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is tesB [H]
Identifier: 157962612
GI number: 157962612
Start: 3407670
End: 3408536
Strand: Reverse
Name: tesB [H]
Synonym: Spea_2791
Alternate gene names: 157962612
Gene position: 3408536-3407670 (Counterclockwise)
Preceding gene: 157962613
Following gene: 157962611
Centisome position: 65.87
GC content: 48.67
Gene sequence:
>867_bases ATGAGCCAAGTATTAGATGATCTTCTAGCGTTACTTTCTTTAGAACAGATCGAAGAGGGGCTGTTTCGTGGCCAAAGCCA AGATCTTGGTTTTGGGCATGTCTTTGGCGGTCAAGTCATGGGGCAAGCGCTTAGCGCGGCTAAGCGTACTGTGAGTCCTG ATCGCAAAGTGCACTCTTTACACTCCTATTTTTTACGTGCGGGTGATGAGAAGCTACCCATCGTTTATGATGTTGAAATC ATGCGAGATGGCGGCAGTTTTAGTGCGAGAAGAGTCAAAGCTATCCAGAAAGGTCGTCCTATATTCTATATGACCTGCTC TTTTCAAACGAGCGAGGAAGGTTATGAGCATCAAGCGACTATGCCTGATGTGCCGGGGCCTGAAGGTCTGCTTAACCAAC AAGAACTGGCGATGACACTGAGAGACAAGGTGCCGTCTAAAGTGCTTGAGAAGTTTATGGCTGACACGCCGATTGAGATG CGTCTAGTCAATCCAAGTGATCCCATCGCACCTAAAGCCTGCGAGCCTATTCGTTATGTATGGATCCGGGCCAATGGCAA GTTGCCAGATAATTTCTCTGTGCACGACTATTTGCTCGCCTATGCGTCAGACTTTAACTTTCTGGTGACGGCTGCGCAGC CTCATGGGGTGTCATTTTTGACCCCAGGTATGCGAATGGCGACGATCGATCACGCTATGTGGTTCCACCGTCCGTTCGAT TTCAGTCAGTGGCTTTTGTATAGCATCGATAGCCCTAATGCCTGTGGTGGTAGAGGTTTTGTAAGAGGGCAATTCTTTAA TCAACAAGGTGAGCTGGTGGCGTCTGCAACCCAGGAAGGCCTCATCCGTATGACAAAGAAAGCATAG
Upstream 100 bases:
>100_bases GTCGGCAAATCAGCGTCACATCAATATAGAGTAAAACTGGCGAGGTTGGGGGATCTTGAGTTAAGCTTATGGCCATAATT AGCTGATTTTTTAGGTTGTA
Downstream 100 bases:
>100_bases TCAATGTTAGTAAAGTTTATATTAGATACTCAGGATTAGAATCATGATCTCATTAATGAAGAAAAGCATCGTACTTTTAT GTGTCTTGGTATTGACGGCG
Product: acyl-CoA thioesterase II
Products: Hydrolyzed acyl-CoA thioesters [C]
Alternate protein names: Acyl-CoA thioesterase II; TEII [H]
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MSQVLDDLLALLSLEQIEEGLFRGQSQDLGFGHVFGGQVMGQALSAAKRTVSPDRKVHSLHSYFLRAGDEKLPIVYDVEI MRDGGSFSARRVKAIQKGRPIFYMTCSFQTSEEGYEHQATMPDVPGPEGLLNQQELAMTLRDKVPSKVLEKFMADTPIEM RLVNPSDPIAPKACEPIRYVWIRANGKLPDNFSVHDYLLAYASDFNFLVTAAQPHGVSFLTPGMRMATIDHAMWFHRPFD FSQWLLYSIDSPNACGGRGFVRGQFFNQQGELVASATQEGLIRMTKKA
Sequences:
>Translated_288_residues MSQVLDDLLALLSLEQIEEGLFRGQSQDLGFGHVFGGQVMGQALSAAKRTVSPDRKVHSLHSYFLRAGDEKLPIVYDVEI MRDGGSFSARRVKAIQKGRPIFYMTCSFQTSEEGYEHQATMPDVPGPEGLLNQQELAMTLRDKVPSKVLEKFMADTPIEM RLVNPSDPIAPKACEPIRYVWIRANGKLPDNFSVHDYLLAYASDFNFLVTAAQPHGVSFLTPGMRMATIDHAMWFHRPFD FSQWLLYSIDSPNACGGRGFVRGQFFNQQGELVASATQEGLIRMTKKA >Mature_287_residues SQVLDDLLALLSLEQIEEGLFRGQSQDLGFGHVFGGQVMGQALSAAKRTVSPDRKVHSLHSYFLRAGDEKLPIVYDVEIM RDGGSFSARRVKAIQKGRPIFYMTCSFQTSEEGYEHQATMPDVPGPEGLLNQQELAMTLRDKVPSKVLEKFMADTPIEMR LVNPSDPIAPKACEPIRYVWIRANGKLPDNFSVHDYLLAYASDFNFLVTAAQPHGVSFLTPGMRMATIDHAMWFHRPFDF SQWLLYSIDSPNACGGRGFVRGQFFNQQGELVASATQEGLIRMTKKA
Specific function: Can hydrolyze a broad range of acyl-CoA thioesters. Its physiological function is not known [H]
COG id: COG1946
COG function: function code I; Acyl-CoA thioesterase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the C/M/P thioester hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI34577075, Length=292, Percent_Identity=42.4657534246575, Blast_Score=219, Evalue=2e-57, Organism=Escherichia coli, GI1786657, Length=283, Percent_Identity=60.7773851590106, Blast_Score=355, Evalue=2e-99, Organism=Caenorhabditis elegans, GI71988741, Length=293, Percent_Identity=36.1774744027304, Blast_Score=185, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17531889, Length=278, Percent_Identity=35.6115107913669, Blast_Score=161, Evalue=3e-40, Organism=Caenorhabditis elegans, GI115532456, Length=278, Percent_Identity=35.6115107913669, Blast_Score=161, Evalue=4e-40, Organism=Caenorhabditis elegans, GI17531885, Length=278, Percent_Identity=35.6115107913669, Blast_Score=160, Evalue=5e-40, Organism=Caenorhabditis elegans, GI17558508, Length=319, Percent_Identity=34.7962382445141, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI71982224, Length=299, Percent_Identity=28.7625418060201, Blast_Score=123, Evalue=8e-29, Organism=Caenorhabditis elegans, GI212645202, Length=270, Percent_Identity=31.4814814814815, Blast_Score=122, Evalue=2e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003703 [H]
Pfam domain/function: PF02551 Acyl_CoA_thio [H]
EC number: 3.1.2.- [C]
Molecular weight: Translated: 32225; Mature: 32094
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQVLDDLLALLSLEQIEEGLFRGQSQDLGFGHVFGGQVMGQALSAAKRTVSPDRKVHSL CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH HSYFLRAGDEKLPIVYDVEIMRDGGSFSARRVKAIQKGRPIFYMTCSFQTSEEGYEHQAT HHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC MPDVPGPEGLLNQQELAMTLRDKVPSKVLEKFMADTPIEMRLVNPSDPIAPKACEPIRYV CCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEE WIRANGKLPDNFSVHDYLLAYASDFNFLVTAAQPHGVSFLTPGMRMATIDHAMWFHRPFD EEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEECCCCEEHHHHHHHHHCCCCC FSQWLLYSIDSPNACGGRGFVRGQFFNQQGELVASATQEGLIRMTKKA CCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCC >Mature Secondary Structure SQVLDDLLALLSLEQIEEGLFRGQSQDLGFGHVFGGQVMGQALSAAKRTVSPDRKVHSL HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHH HSYFLRAGDEKLPIVYDVEIMRDGGSFSARRVKAIQKGRPIFYMTCSFQTSEEGYEHQAT HHHHHHCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCC MPDVPGPEGLLNQQELAMTLRDKVPSKVLEKFMADTPIEMRLVNPSDPIAPKACEPIRYV CCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCEEEE WIRANGKLPDNFSVHDYLLAYASDFNFLVTAAQPHGVSFLTPGMRMATIDHAMWFHRPFD EEEECCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCEEECCCCEEHHHHHHHHHCCCCC FSQWLLYSIDSPNACGGRGFVRGQFFNQQGELVASATQEGLIRMTKKA CCCEEEEECCCCCCCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: acyl-CoA thioesters [C]
Specific reaction: Hydrolyzes a broad range of acyl-CoA thioesters [C]
General reaction: Hydrolase; Acting on ester bonds; Thiolester hydrolases [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]