| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962609
Identifier: 157962609
GI number: 157962609
Start: 3405700
End: 3406422
Strand: Reverse
Name: 157962609
Synonym: Spea_2788
Alternate gene names: NA
Gene position: 3406422-3405700 (Counterclockwise)
Preceding gene: 157962610
Following gene: 157962608
Centisome position: 65.83
GC content: 46.75
Gene sequence:
>723_bases ATGGATCCTTATCTTGATGCAATAAAAGAAATTAAAGAGTTGGCAACCGCAGAGGAGATCCATCGAGTTGATGATGTATC GATATATCTGGAGCGGTTTACTGAACTTGATTTGATCGCCACCGGTATCTATGCCGAAGTGTACGAAGTGCCCGGAGAGC CCGATAAAGTGGTTAAGCTGTGCAACAGTAAGATCGATGGTTATTATCTGTTTGCCCGCTGGTGCATGCGCCCAGAAAAT CAAGACAATCCCCATGTTCCCACCATACATCGTGAAGACACTATTGAGCTGAGTAGCGGCCGAGTGGTGCGCTTTTATGT GATGGAGCGGCTTGAAGACATCACTGATGACGGCAAAGAGCCAACCCGCCCAAGCCATTTTCACGATTATGATTTTGGTA AACTCTGGGGCACTTTGCGTACCATGACCTTACCATTTGCCGATCCAGAGAAACCCTTTACCGACGAGGTTCAAAGCGTC GATGAGTTTGTTGAGCAGATCCAAGAGCCACGAACGCACTTCTATATGAGTTCGGATGAGCGCAAGCCTGTGGTGATAAA TGATGAAATTATCGATGAGCATGAAGAGCTACTGAAAACCTTGTTTGAGGTGCTGAGTTTTGTTGATGACCATGGGGTGA TGGACCTACATGGCGGCAACTACATGCTCCGAGGCGACACGATTGTTATTACTGATCCCATCTCCCACAAATACTCAAGT TAA
Upstream 100 bases:
>100_bases CAATGATTTTGGAGACTATAATGGTTTCCTTTTAAGCTTTTTGTATAGCTTGCCATAGGGACTTCTCAATTTGTTCTTGC TGTAAATGGTGGTTTAATCG
Downstream 100 bases:
>100_bases TGCGCGGTTGGATCAATTGTTCAATCAATAAAATTCAGCCTTGCAGAGAAACTTGTCTGAGACTCAATCTTTATCAATTG TCACCAACTCCTTTTACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MDPYLDAIKEIKELATAEEIHRVDDVSIYLERFTELDLIATGIYAEVYEVPGEPDKVVKLCNSKIDGYYLFARWCMRPEN QDNPHVPTIHREDTIELSSGRVVRFYVMERLEDITDDGKEPTRPSHFHDYDFGKLWGTLRTMTLPFADPEKPFTDEVQSV DEFVEQIQEPRTHFYMSSDERKPVVINDEIIDEHEELLKTLFEVLSFVDDHGVMDLHGGNYMLRGDTIVITDPISHKYSS
Sequences:
>Translated_240_residues MDPYLDAIKEIKELATAEEIHRVDDVSIYLERFTELDLIATGIYAEVYEVPGEPDKVVKLCNSKIDGYYLFARWCMRPEN QDNPHVPTIHREDTIELSSGRVVRFYVMERLEDITDDGKEPTRPSHFHDYDFGKLWGTLRTMTLPFADPEKPFTDEVQSV DEFVEQIQEPRTHFYMSSDERKPVVINDEIIDEHEELLKTLFEVLSFVDDHGVMDLHGGNYMLRGDTIVITDPISHKYSS >Mature_240_residues MDPYLDAIKEIKELATAEEIHRVDDVSIYLERFTELDLIATGIYAEVYEVPGEPDKVVKLCNSKIDGYYLFARWCMRPEN QDNPHVPTIHREDTIELSSGRVVRFYVMERLEDITDDGKEPTRPSHFHDYDFGKLWGTLRTMTLPFADPEKPFTDEVQSV DEFVEQIQEPRTHFYMSSDERKPVVINDEIIDEHEELLKTLFEVLSFVDDHGVMDLHGGNYMLRGDTIVITDPISHKYSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27949; Mature: 27949
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPYLDAIKEIKELATAEEIHRVDDVSIYLERFTELDLIATGIYAEVYEVPGEPDKVVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH CNSKIDGYYLFARWCMRPENQDNPHVPTIHREDTIELSSGRVVRFYVMERLEDITDDGKE HCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEHHHHHHHHHHHHCCCCC PTRPSHFHDYDFGKLWGTLRTMTLPFADPEKPFTDEVQSVDEFVEQIQEPRTHFYMSSDE CCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCC RKPVVINDEIIDEHEELLKTLFEVLSFVDDHGVMDLHGGNYMLRGDTIVITDPISHKYSS CCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCEEEEECCCCCCCCC >Mature Secondary Structure MDPYLDAIKEIKELATAEEIHRVDDVSIYLERFTELDLIATGIYAEVYEVPGEPDKVVKL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH CNSKIDGYYLFARWCMRPENQDNPHVPTIHREDTIELSSGRVVRFYVMERLEDITDDGKE HCCCCCCEEHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCEEHHHHHHHHHHHHCCCCC PTRPSHFHDYDFGKLWGTLRTMTLPFADPEKPFTDEVQSVDEFVEQIQEPRTHFYMSSDE CCCCCCCCCCCHHHHHHHHHHEECCCCCCCCCHHHHHHHHHHHHHHHHCCHHEEEECCCC RKPVVINDEIIDEHEELLKTLFEVLSFVDDHGVMDLHGGNYMLRGDTIVITDPISHKYSS CCCEEECHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECCEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA