| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is metA
Identifier: 157962605
GI number: 157962605
Start: 3402046
End: 3402990
Strand: Reverse
Name: metA
Synonym: Spea_2784
Alternate gene names: 157962605
Gene position: 3402990-3402046 (Counterclockwise)
Preceding gene: 157962606
Following gene: 157962604
Centisome position: 65.76
GC content: 45.08
Gene sequence:
>945_bases ATGCCGGTTAAAATCCCCGATGATCTGCCCGCGGCAGAGATCTTGGAGTCTGAGAATATCTTCGTAATGTCGGAGACTCG GGCTGCGAATCAAGATATTCGTCCAATGAAGGTATTAATTCTTAATTTAATGCCCAATAAGATTGAGACCGAAACCCAGC TGCTACGTCTTCTTGGTAATACCCCGCTGCAAGTCGATGTGGATCTGCTCAGAATTCACGATAAAGCCTCTAAGCATACT TCTATCGATCACATGAATAACTTCTATCGCGATTTTGAGCAGATCAGGCAGAAGAACTACGATGGCTTGATTATTACCGG AGCGCCTCTGGGCAAGATTGAGTTTGACGAAGTTTCTTATTGGGATCATATTCGTGAGATCATCGATTGGTCACAGCAAC ATGTCACCTCGGTACTTTTTTTATGCTGGGCGGCTCATGCTGCTCTGTATCACCTTTTTGGTTTAAACCGTTCGCTGTTA GAAATAAAGCGCGCCGGGGTATTTTCCCACAAGCGCACAAGTGTGCATTACCCTTTGTTACGTGGTTTTGACGATGAGTT TTTCGCTCCTCATTCCCGCTTTGCCGAAATGGATATTGAAAAGTTACGCGCCCACCCAGAGCTAGAGGTGTTAACCGAGT CTGACGAGGCGGGCGCCTACATGGTACTGAGCAAAAATAACCGTAATCTGTTTGTGATGGGACATCCTGAATATCAAAAA TCGACATTGAAAGATGAGTATAATCGCGATATAGCTCAGGGTTTGACGCCTGAGTTACCGAAAAACTACTTTAAAAATGA CGATCCAGATCAGGAGCCGATCTCGCGTTGGCATAGTCATGGAAGCCTATTGGTCAGCAACTGGCTTAACTATTACGTCT ATCAGCTTACGCCCTATAATTTAGATGATATGACAGGAATTACCCCTTGGGAGTCGAAGGACTAG
Upstream 100 bases:
>100_bases TTAGTACAGAAGGTGGCACGCTAAATAGATTAACTGTGAGTTAGTTTAGCCGGCGCGCCTCTTTCTGATAGGTTACTTAA TTAGGAAAAAGAGGCGCGCT
Downstream 100 bases:
>100_bases TCGTCCTCACTTCACTCTAATAAGCCGATACCGCTACAGCGTATCGGCTTTTTTGTTTTTACCTTGTCTCCAGCAGCATC TGTACCGCACAACTAATCAA
Product: homoserine O-succinyltransferase
Products: NA
Alternate protein names: Homoserine O-transsuccinylase; HTS
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKASKHT SIDHMNNFYRDFEQIRQKNYDGLIITGAPLGKIEFDEVSYWDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLL EIKRAGVFSHKRTSVHYPLLRGFDDEFFAPHSRFAEMDIEKLRAHPELEVLTESDEAGAYMVLSKNNRNLFVMGHPEYQK STLKDEYNRDIAQGLTPELPKNYFKNDDPDQEPISRWHSHGSLLVSNWLNYYVYQLTPYNLDDMTGITPWESKD
Sequences:
>Translated_314_residues MPVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKASKHT SIDHMNNFYRDFEQIRQKNYDGLIITGAPLGKIEFDEVSYWDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLL EIKRAGVFSHKRTSVHYPLLRGFDDEFFAPHSRFAEMDIEKLRAHPELEVLTESDEAGAYMVLSKNNRNLFVMGHPEYQK STLKDEYNRDIAQGLTPELPKNYFKNDDPDQEPISRWHSHGSLLVSNWLNYYVYQLTPYNLDDMTGITPWESKD >Mature_313_residues PVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGNTPLQVDVDLLRIHDKASKHTS IDHMNNFYRDFEQIRQKNYDGLIITGAPLGKIEFDEVSYWDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLLE IKRAGVFSHKRTSVHYPLLRGFDDEFFAPHSRFAEMDIEKLRAHPELEVLTESDEAGAYMVLSKNNRNLFVMGHPEYQKS TLKDEYNRDIAQGLTPELPKNYFKNDDPDQEPISRWHSHGSLLVSNWLNYYVYQLTPYNLDDMTGITPWESKD
Specific function: Methionine biosynthesis; HTS variant; first step. [C]
COG id: COG1897
COG function: function code E; Homoserine trans-succinylase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HTS family
Homologues:
Organism=Escherichia coli, GI1790443, Length=304, Percent_Identity=53.2894736842105, Blast_Score=359, Evalue=1e-100,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): META_SHEPA (A8H6B7)
Other databases:
- EMBL: CP000851 - RefSeq: YP_001502639.1 - ProteinModelPortal: A8H6B7 - SMR: A8H6B7 - STRING: A8H6B7 - GeneID: 5663177 - GenomeReviews: CP000851_GR - KEGG: spl:Spea_2784 - NMPDR: fig|398579.3.peg.2405 - eggNOG: COG1897 - HOGENOM: HBG362506 - OMA: QAGLYYH - ProtClustDB: PRK05368 - BioCyc: SPEA398579:SPEA_2784-MONOMER - GO: GO:0005737 - HAMAP: MF_00295 - InterPro: IPR005697 - PANTHER: PTHR20919 - PIRSF: PIRSF000450 - ProDom: PD037892 - TIGRFAMs: TIGR01001
Pfam domain/function: PF04204 HTS
EC number: =2.3.1.46
Molecular weight: Translated: 36557; Mature: 36426
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: ACT_SITE 142-142
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN CCCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC TPLQVDVDLLRIHDKASKHTSIDHMNNFYRDFEQIRQKNYDGLIITGAPLGKIEFDEVSY CCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHHH WDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLLEIKRAGVFSHKRTSVHYPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHH RGFDDEFFAPHSRFAEMDIEKLRAHPELEVLTESDEAGAYMVLSKNNRNLFVMGHPEYQK HCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCHHHH STLKDEYNRDIAQGLTPELPKNYFKNDDPDQEPISRWHSHGSLLVSNWLNYYVYQLTPYN HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCEEEEEECCCC LDDMTGITPWESKD CCCCCCCCCCCCCC >Mature Secondary Structure PVKIPDDLPAAEILESENIFVMSETRAANQDIRPMKVLILNLMPNKIETETQLLRLLGN CCCCCCCCCHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHCC TPLQVDVDLLRIHDKASKHTSIDHMNNFYRDFEQIRQKNYDGLIITGAPLGKIEFDEVSY CCCEEEHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEHHHHHH WDHIREIIDWSQQHVTSVLFLCWAAHAALYHLFGLNRSLLEIKRAGVFSHKRTSVHYPLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCHHH RGFDDEFFAPHSRFAEMDIEKLRAHPELEVLTESDEAGAYMVLSKNNRNLFVMGHPEYQK HCCCHHHCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCHHHH STLKDEYNRDIAQGLTPELPKNYFKNDDPDQEPISRWHSHGSLLVSNWLNYYVYQLTPYN HHHHHHHHHHHHHCCCCHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHCEEEEEECCCC LDDMTGITPWESKD CCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA