Definition Shewanella pealeana ATCC 700345 chromosome, complete genome.
Accession NC_009901
Length 5,174,581

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The map label for this gene is 157962296

Identifier: 157962296

GI number: 157962296

Start: 3020589

End: 3020942

Strand: Reverse

Name: 157962296

Synonym: Spea_2475

Alternate gene names: NA

Gene position: 3020942-3020589 (Counterclockwise)

Preceding gene: 157962297

Following gene: 157962295

Centisome position: 58.38

GC content: 42.66

Gene sequence:

>354_bases
ATGGTTACCGATAAAGACGGATATGTACACCTGATCCAGTATTTGACTGAGCATTTAGGGATATTTGAAAACTCACAGCA
ACACAGCGCCATTGAAGAGACTGTGATGGAGCTGTTTGAAGAGCAACTCGCCGCACAAATTATCATGGTTTGTGGCCAAA
ACCCTTCATTGACTTTCTCTCAGAGAAATCTGGTGATCCGAGAAGTCGATGCCATTGTGTATGATCTTGAGGAGATCTTA
GCTCGAGTCGCTAGTCATAAGGCTACCGCCGAGCAAACTCGGTTTATTTGTGAGTTCTCCTGTTTAATTAAGAATCTGTT
CGACCAAGAAATTGCTAGATTAACTGCTGAATGA

Upstream 100 bases:

>100_bases
ATAGTATCTTGTCTTAGAAGATAAATAATAAAATTGTTACGCATCTTACGCTATAGAGAGAACTCTCCGTGTGTATAGAT
TTGTGTATTTTGAGTTGAGT

Downstream 100 bases:

>100_bases
TGTCTGAAGTTTTATATTTAGTTACAGTTCTCTCTCGCTATCTGCTTGTTGCCCTTAACCTAAAGGCCTAATGTTGCAGT
ATCGATGTGGGAGAGTACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 117; Mature: 117

Protein sequence:

>117_residues
MVTDKDGYVHLIQYLTEHLGIFENSQQHSAIEETVMELFEEQLAAQIIMVCGQNPSLTFSQRNLVIREVDAIVYDLEEIL
ARVASHKATAEQTRFICEFSCLIKNLFDQEIARLTAE

Sequences:

>Translated_117_residues
MVTDKDGYVHLIQYLTEHLGIFENSQQHSAIEETVMELFEEQLAAQIIMVCGQNPSLTFSQRNLVIREVDAIVYDLEEIL
ARVASHKATAEQTRFICEFSCLIKNLFDQEIARLTAE
>Mature_117_residues
MVTDKDGYVHLIQYLTEHLGIFENSQQHSAIEETVMELFEEQLAAQIIMVCGQNPSLTFSQRNLVIREVDAIVYDLEEIL
ARVASHKATAEQTRFICEFSCLIKNLFDQEIARLTAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13405; Mature: 13405

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTDKDGYVHLIQYLTEHLGIFENSQQHSAIEETVMELFEEQLAAQIIMVCGQNPSLTFS
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEH
QRNLVIREVDAIVYDLEEILARVASHKATAEQTRFICEFSCLIKNLFDQEIARLTAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVTDKDGYVHLIQYLTEHLGIFENSQQHSAIEETVMELFEEQLAAQIIMVCGQNPSLTFS
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEH
QRNLVIREVDAIVYDLEEILARVASHKATAEQTRFICEFSCLIKNLFDQEIARLTAE
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA