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The map label for this gene is yedY [H]

Identifier: 157962234

GI number: 157962234

Start: 2941830

End: 2942852

Strand: Reverse

Name: yedY [H]

Synonym: Spea_2413

Alternate gene names: 157962234

Gene position: 2942852-2941830 (Counterclockwise)

Preceding gene: 157962244

Following gene: 157962233

Centisome position: 56.87

GC content: 44.48

Gene sequence:

>1023_bases
ATGAATATAAGAAAAGCAGTAGCATGGAACAAATATAAAGAGGGCGATATCACCCCTGAAGAGATCTATCAAGACCGTAG
GCAAATCTTGAAACAATTAGGCTTTGTTGGTGCCGGAGCGCTACTGTCTTCCCATGCTAATGCTGGAATACTCGATCTAT
TCTCAAGTGATAAGCAAAAAGCGGCTTTTGCCACCAAGGCGTTACCCTTTGAAAAACAAACTGAGTATGATCATTTACTC
TATGGTGAGCTAACCCCTGAATCGAAGATTATCTCTCACAATAACTTCTTTGAATTTGGCACCAGTAAGACAGATCCCCA
AGATAATGCTCAGGAGCTAAAAGTCGATCCCTGGAAGTTGATTATTGATGGTGAAGTCGATACGCCGATGACACTGGATT
ATGACGATTTGCTTAGTCTGTTTCCGTTAGAGGAGCGTACCTATAATTTTCGTTGCGTAGAAGCTTGGTCTATGGTGATC
CCTTGGGTTGGTTTCTCTCTGGCGTCGCTGCTTAAAAAAGTAGGGGTAAACAGCAGAGCAAAATACGTGGCTTTTGAAAC
CTTGTACGATCCCGAGCAGATGCCGGGGCAGAAGAATCCATATGTGGGAGGGGGGATCAATTACCCTTATGTAGAGGGGT
TAACCTTAGCCGAAGCGATGAATGATTTAACTTTCATGTCGGTTGGACTATATGGCAAAACATTGCCACCGCAAAATGGC
GCACCTATTCGATTGGTCGTCCCTTGGAAGTACGGTTTTAAGAGTATTAAGTCGGTAGTGCGTATTCGCTTGACCGATAA
ACAGCCTGCCACATCTTGGAATCAACTTGCCCCAAATGAATATGGTTTTTTTGCCAATGTTAACCCCTCGGTGGATCATC
CAAGGTGGTCTCAGGCTTCGGAGCGAAGAATCTCGCAGGGGGGATTATTTTCCGCCAAAAGGATCCCAACACTGCCTTTT
AATGGCTATGGCGAGTCAGTTGCTAGTCTCTATAGCGGCATAGATCTGAAACGATTCTATTAA

Upstream 100 bases:

>100_bases
ATGAGATGTAATAGGAAAAGGGTGAAACCTTTTTATTGTTTTGTCGGTCTGATTAGTTAAGTGAAATGGATTAGTCCACA
GCCTAGGGTGGTGTTAGCGA

Downstream 100 bases:

>100_bases
AGTGGTGACACTGGTATTTAAGAAAACGTTCGAAGGAGGTTTTCATGGGCTCGACTAGCCGTCATTTGTTTTGGCTAAAA
GCATCATTTCACCTCATTGG

Product: putative sulfite oxidase subunit YedY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 340

Protein sequence:

>340_residues
MNIRKAVAWNKYKEGDITPEEIYQDRRQILKQLGFVGAGALLSSHANAGILDLFSSDKQKAAFATKALPFEKQTEYDHLL
YGELTPESKIISHNNFFEFGTSKTDPQDNAQELKVDPWKLIIDGEVDTPMTLDYDDLLSLFPLEERTYNFRCVEAWSMVI
PWVGFSLASLLKKVGVNSRAKYVAFETLYDPEQMPGQKNPYVGGGINYPYVEGLTLAEAMNDLTFMSVGLYGKTLPPQNG
APIRLVVPWKYGFKSIKSVVRIRLTDKQPATSWNQLAPNEYGFFANVNPSVDHPRWSQASERRISQGGLFSAKRIPTLPF
NGYGESVASLYSGIDLKRFY

Sequences:

>Translated_340_residues
MNIRKAVAWNKYKEGDITPEEIYQDRRQILKQLGFVGAGALLSSHANAGILDLFSSDKQKAAFATKALPFEKQTEYDHLL
YGELTPESKIISHNNFFEFGTSKTDPQDNAQELKVDPWKLIIDGEVDTPMTLDYDDLLSLFPLEERTYNFRCVEAWSMVI
PWVGFSLASLLKKVGVNSRAKYVAFETLYDPEQMPGQKNPYVGGGINYPYVEGLTLAEAMNDLTFMSVGLYGKTLPPQNG
APIRLVVPWKYGFKSIKSVVRIRLTDKQPATSWNQLAPNEYGFFANVNPSVDHPRWSQASERRISQGGLFSAKRIPTLPF
NGYGESVASLYSGIDLKRFY
>Mature_340_residues
MNIRKAVAWNKYKEGDITPEEIYQDRRQILKQLGFVGAGALLSSHANAGILDLFSSDKQKAAFATKALPFEKQTEYDHLL
YGELTPESKIISHNNFFEFGTSKTDPQDNAQELKVDPWKLIIDGEVDTPMTLDYDDLLSLFPLEERTYNFRCVEAWSMVI
PWVGFSLASLLKKVGVNSRAKYVAFETLYDPEQMPGQKNPYVGGGINYPYVEGLTLAEAMNDLTFMSVGLYGKTLPPQNG
APIRLVVPWKYGFKSIKSVVRIRLTDKQPATSWNQLAPNEYGFFANVNPSVDHPRWSQASERRISQGGLFSAKRIPTLPF
NGYGESVASLYSGIDLKRFY

Specific function: The exact function is not known. Can catalyze the reduction of a variety of substrates like dimethyl sulfoxide, trimethylamine N-oxide, phenylmethyl sulfoxide and L-methionine sulfoxide. Cannot reduce cyclic N-oxides. Shows no activity as sulfite oxidase

COG id: COG2041

COG function: function code R; Sulfite oxidase and related enzymes

Gene ontology:

Cell location: Periplasm. Note=Is attached to the inner membrane when interacting with the yedZ subunit (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yedY family [H]

Homologues:

Organism=Escherichia coli, GI1788282, Length=326, Percent_Identity=57.9754601226994, Blast_Score=389, Evalue=1e-109,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000572
- InterPro:   IPR006311
- InterPro:   IPR022867 [H]

Pfam domain/function: PF00174 Oxidored_molyb [H]

EC number: NA

Molecular weight: Translated: 38323; Mature: 38323

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIRKAVAWNKYKEGDITPEEIYQDRRQILKQLGFVGAGALLSSHANAGILDLFSSDKQK
CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEHHCCCCHH
AAFATKALPFEKQTEYDHLLYGELTPESKIISHNNFFEFGTSKTDPQDNAQELKVDPWKL
HHHHHHCCCCCCCCCCCEEEEECCCCCCEEECCCCEEECCCCCCCCCCCHHHEECCCEEE
IIDGEVDTPMTLDYDDLLSLFPLEERTYNFRCVEAWSMVIPWVGFSLASLLKKVGVNSRA
EECCCCCCCEEECHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KYVAFETLYDPEQMPGQKNPYVGGGINYPYVEGLTLAEAMNDLTFMSVGLYGKTLPPQNG
EEEEEEECCCHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCEEEEECCCCCCCCCCCC
APIRLVVPWKYGFKSIKSVVRIRLTDKQPATSWNQLAPNEYGFFANVNPSVDHPRWSQAS
CCEEEEECCHHHHHHHHHHEEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCHH
ERRISQGGLFSAKRIPTLPFNGYGESVASLYSGIDLKRFY
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNIRKAVAWNKYKEGDITPEEIYQDRRQILKQLGFVGAGALLSSHANAGILDLFSSDKQK
CCCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEEHHCCCCHH
AAFATKALPFEKQTEYDHLLYGELTPESKIISHNNFFEFGTSKTDPQDNAQELKVDPWKL
HHHHHHCCCCCCCCCCCEEEEECCCCCCEEECCCCEEECCCCCCCCCCCHHHEECCCEEE
IIDGEVDTPMTLDYDDLLSLFPLEERTYNFRCVEAWSMVIPWVGFSLASLLKKVGVNSRA
EECCCCCCCEEECHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCC
KYVAFETLYDPEQMPGQKNPYVGGGINYPYVEGLTLAEAMNDLTFMSVGLYGKTLPPQNG
EEEEEEECCCHHHCCCCCCCCCCCCCCCCHHCCCHHHHHHCCCEEEEECCCCCCCCCCCC
APIRLVVPWKYGFKSIKSVVRIRLTDKQPATSWNQLAPNEYGFFANVNPSVDHPRWSQAS
CCEEEEECCHHHHHHHHHHEEEEECCCCCCCCHHHCCCCCCCEEEECCCCCCCCCCCCHH
ERRISQGGLFSAKRIPTLPFNGYGESVASLYSGIDLKRFY
HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Mo [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA