| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962222
Identifier: 157962222
GI number: 157962222
Start: 2930138
End: 2931472
Strand: Reverse
Name: 157962222
Synonym: Spea_2401
Alternate gene names: NA
Gene position: 2931472-2930138 (Counterclockwise)
Preceding gene: 157962223
Following gene: 157962221
Centisome position: 56.65
GC content: 44.57
Gene sequence:
>1335_bases ATGAGTCCCAATATGGTTAGAAGAGTTAAACTGTTTACTGCTTTCTTACTCTGCTATTGCTCACTGAGCGCGGCAACATT CGCCAATGTCGTGCTCTCTAATCATGCCTCGGAACTGAAAAATCGGTTTAGAATCGACCACATGGTCGATTCTATGACAC TGCTCATCCACAGAGAGTACGGCAGTGGTCCTGTGGTGATTGTGCGTCCAGATGGCAGTAAATGGTATGTGAATCGTCAC CCAGAAGATAAAGTCACTTGGATGGAGGGCCTAACGGGTGACATGATCACCATTAAAAAGCCGATGCCAGGTCCTTGGCA GTTGCTTGGACAAGTGGTGCAGGGCTCTGTTATTGAAAAGGTCTCGATACTGACAATCGAGGTCGATGCCATCCCTCAAC CTCTGTTCCAAGGGGAACGTCTTAAATTAACAGCCAGATTATTAGGAGATGAGCAGAAAGTTCGCCTACCTGGTCTAGAT TTTATGATGAATTGGACTGCACGTTTTATTAGCAAGAATAATACCGCAGATGAAAACTACGCTGCGGGAACCGTAATCGT AGGTGCTTATCGAGATAACGGTGAGGCACTCGATGAGAAACCAGATGACGGCATATTTACCAGTGATTTAGATTTGGAGC AGCCCTGGGGAGATTACGCCTTGCAAGTTCAGGCGAAAAATACGGTGTTAGAGCGAGAGTACACACAAGACTTTAGGTTG TCTCAACGCCCAATTGACGTGAAGTTGCTCCCCACTGAAACTCCTAATCTCGGGCTCTGGACATTGGATGTTGAGATAGA CGATGAAGTACTGTTATTGGAGCAGACTCATTTAGAGGCCGAAATTATGGGGCCTACGGGTAAGGTTATTCCTGTCTCAA TCGCGAATTTCACCGAAAAGCAAAGTCAGTTCAGTCTACCTAGAGTCATAGACTTTGGAAGTTACGATCTGAAAATTAGC GCGATGAGCACAACCCTTGATGGAAGAGAGATCTATTTAAGCCTACCAGAACTATTTTTTAATCTGATTGAACCTCCTGA GCCACCACCTAGTGAAGAAGAGCTTGCAGCCAGAGCCGAAGCGATAGCCAAGGTACAGGAGCAGGCAGCTAAAGAAGAAG CGATTTTACTGATAGTTTTAATCAATATTGTTCTGATAGTGGTTGGTGTATTGGTTTTATTGTTTATTCGTAAGCGTAGT AATCTTAAAAAAGCATTAGCTGCGACAGAGGCTCGACTGGAAAAAGAGATCCGTAAAGAGAAAGTTTTGCTTGAGTTGGA CCAAATCGATCTTACCATGCCAGAAGATACCGATAATCAGCTTGGAAAAAGCTAG
Upstream 100 bases:
>100_bases GTGATCGCCGCATCGGCCGATGAACTGATTAGACACGAAGAGCGATTAGACTTAGTCGCAAAATCAGGACAATGCCTCTG GCGCGGATAAATGTCACTTT
Downstream 100 bases:
>100_bases TGTTTCTTGCTAAATCGTCTAAGGAAAAAACGAATTGTTTATTTTTCGATTAGTCAGTTAAAATCTTATGAAAAACCTAT TGACGGACTACCTCACTCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSPNMVRRVKLFTAFLLCYCSLSAATFANVVLSNHASELKNRFRIDHMVDSMTLLIHREYGSGPVVIVRPDGSKWYVNRH PEDKVTWMEGLTGDMITIKKPMPGPWQLLGQVVQGSVIEKVSILTIEVDAIPQPLFQGERLKLTARLLGDEQKVRLPGLD FMMNWTARFISKNNTADENYAAGTVIVGAYRDNGEALDEKPDDGIFTSDLDLEQPWGDYALQVQAKNTVLEREYTQDFRL SQRPIDVKLLPTETPNLGLWTLDVEIDDEVLLLEQTHLEAEIMGPTGKVIPVSIANFTEKQSQFSLPRVIDFGSYDLKIS AMSTTLDGREIYLSLPELFFNLIEPPEPPPSEEELAARAEAIAKVQEQAAKEEAILLIVLINIVLIVVGVLVLLFIRKRS NLKKALAATEARLEKEIRKEKVLLELDQIDLTMPEDTDNQLGKS
Sequences:
>Translated_444_residues MSPNMVRRVKLFTAFLLCYCSLSAATFANVVLSNHASELKNRFRIDHMVDSMTLLIHREYGSGPVVIVRPDGSKWYVNRH PEDKVTWMEGLTGDMITIKKPMPGPWQLLGQVVQGSVIEKVSILTIEVDAIPQPLFQGERLKLTARLLGDEQKVRLPGLD FMMNWTARFISKNNTADENYAAGTVIVGAYRDNGEALDEKPDDGIFTSDLDLEQPWGDYALQVQAKNTVLEREYTQDFRL SQRPIDVKLLPTETPNLGLWTLDVEIDDEVLLLEQTHLEAEIMGPTGKVIPVSIANFTEKQSQFSLPRVIDFGSYDLKIS AMSTTLDGREIYLSLPELFFNLIEPPEPPPSEEELAARAEAIAKVQEQAAKEEAILLIVLINIVLIVVGVLVLLFIRKRS NLKKALAATEARLEKEIRKEKVLLELDQIDLTMPEDTDNQLGKS >Mature_443_residues SPNMVRRVKLFTAFLLCYCSLSAATFANVVLSNHASELKNRFRIDHMVDSMTLLIHREYGSGPVVIVRPDGSKWYVNRHP EDKVTWMEGLTGDMITIKKPMPGPWQLLGQVVQGSVIEKVSILTIEVDAIPQPLFQGERLKLTARLLGDEQKVRLPGLDF MMNWTARFISKNNTADENYAAGTVIVGAYRDNGEALDEKPDDGIFTSDLDLEQPWGDYALQVQAKNTVLEREYTQDFRLS QRPIDVKLLPTETPNLGLWTLDVEIDDEVLLLEQTHLEAEIMGPTGKVIPVSIANFTEKQSQFSLPRVIDFGSYDLKISA MSTTLDGREIYLSLPELFFNLIEPPEPPPSEEELAARAEAIAKVQEQAAKEEAILLIVLINIVLIVVGVLVLLFIRKRSN LKKALAATEARLEKEIRKEKVLLELDQIDLTMPEDTDNQLGKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49912; Mature: 49781
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPNMVRRVKLFTAFLLCYCSLSAATFANVVLSNHASELKNRFRIDHMVDSMTLLIHREY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC GSGPVVIVRPDGSKWYVNRHPEDKVTWMEGLTGDMITIKKPMPGPWQLLGQVVQGSVIEK CCCCEEEEECCCCEEEECCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHHCE VSILTIEVDAIPQPLFQGERLKLTARLLGDEQKVRLPGLDFMMNWTARFISKNNTADENY EEEEEEEECCCCCCHHCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCC AAGTVIVGAYRDNGEALDEKPDDGIFTSDLDLEQPWGDYALQVQAKNTVLEREYTQDFRL CCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCC SQRPIDVKLLPTETPNLGLWTLDVEIDDEVLLLEQTHLEAEIMGPTGKVIPVSIANFTEK CCCCCEEEEECCCCCCCEEEEEEEEECCCEEEEEECCCEEEEECCCCCEEEEEHHHHHHH QSQFSLPRVIDFGSYDLKISAMSTTLDGREIYLSLPELFFNLIEPPEPPPSEEELAARAE HHHCCCCCEEECCCCEEEEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHH AIAKVQEQAAKEEAILLIVLINIVLIVVGVLVLLFIRKRSNLKKALAATEARLEKEIRKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVLLELDQIDLTMPEDTDNQLGKS HHEEEECCEEEECCCCCCHHCCCC >Mature Secondary Structure SPNMVRRVKLFTAFLLCYCSLSAATFANVVLSNHASELKNRFRIDHMVDSMTLLIHREY CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEC GSGPVVIVRPDGSKWYVNRHPEDKVTWMEGLTGDMITIKKPMPGPWQLLGQVVQGSVIEK CCCCEEEEECCCCEEEECCCCCCHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCHHHCE VSILTIEVDAIPQPLFQGERLKLTARLLGDEQKVRLPGLDFMMNWTARFISKNNTADENY EEEEEEEECCCCCCHHCCCCEEEEEECCCCCCEEECCCCHHHHHHHHHHHCCCCCCCCCC AAGTVIVGAYRDNGEALDEKPDDGIFTSDLDLEQPWGDYALQVQAKNTVLEREYTQDFRL CCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCCCCCCEEEEEEECCHHHHHHHHHHHCC SQRPIDVKLLPTETPNLGLWTLDVEIDDEVLLLEQTHLEAEIMGPTGKVIPVSIANFTEK CCCCCEEEEECCCCCCCEEEEEEEEECCCEEEEEECCCEEEEECCCCCEEEEEHHHHHHH QSQFSLPRVIDFGSYDLKISAMSTTLDGREIYLSLPELFFNLIEPPEPPPSEEELAARAE HHHCCCCCEEECCCCEEEEEEEEEECCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHHH AIAKVQEQAAKEEAILLIVLINIVLIVVGVLVLLFIRKRSNLKKALAATEARLEKEIRKE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KVLLELDQIDLTMPEDTDNQLGKS HHEEEECCEEEECCCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA