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The map label for this gene is yebC [C]

Identifier: 157962186

GI number: 157962186

Start: 2882717

End: 2883460

Strand: Reverse

Name: yebC [C]

Synonym: Spea_2365

Alternate gene names: 157962186

Gene position: 2883460-2882717 (Counterclockwise)

Preceding gene: 157962187

Following gene: 157962185

Centisome position: 55.72

GC content: 47.31

Gene sequence:

>744_bases
ATGGCAGGACACAGTAAATGGGCCAACATTAAGCATCGTAAAGCGGCCCAAGATGCAAAGCGTGGCAAACTTTTTACAAA
GTTCATTCGAGAGCTCACGGTTGCTGCCCGCGAAGGTGGTTCAGATCCAGACTCGAACCCACGTTTACGTGCCGCCATCG
ACAAATCCCTTTCTAACAACATGACCCGAGATACGGTCGAACGTGCGATTAAGCGTGGCGCTGGTGAACTCGACGGGCAA
GTATTAGAGACCATCATCTATGAAGGTTATGGCCCAGGTGGCACGGCGGTATTAGTCGAGACGATGACTGATAATAAAAA
TCGTACAGTGTCTGGTGTGCGTAATGCATTCAGCAAATCTGGCGGTAACTTAGGCACCGACGGTTCTGTTGCTTATTTGT
TCGATAAGAAAGGCATTATTTCATATGAAGGTGTCGATGAAGATACGGTAATGGACGCGGCATTAGAGGCGGGCGCCGAA
GATGTCGTGACTAACGAAGATGGTTCTATCGATGTGCTAACTTCACCGGAAGACTTTGGAAGAGTGAAGGATGCATTGGA
TAATGCAGGGCTTGAGTCGGTTAATGCTGAAGTAACTATGGTCCCATCGACAAAAGCCGATTTGGACGCGGATACCGCGC
CTAAATTCCTTCGTTTGATTGATAATCTTGAAGATCATGATGATGTTCAAGAGGTGTATCACAACGCAGAAATTTCTGAC
GAAGTGATGGAAGGGCTGGAATAA

Upstream 100 bases:

>100_bases
CGGCTTTTTTTTCGGTAAAATATACCCAAGAGACTTGATAATTACGAATCTTTAGCTCTTACAGGTCGTTTGGGTATAAG
TCAGTATTGAGGAGATAGAG

Downstream 100 bases:

>100_bases
GTAAAATATGGCCATTATTTTGGGGGTCGACCCTGGGTCTAGGATCACTGGATACGGTGTTATTAAATGTGTAGGCAGGC
AACAAGTTTATGTTGGCAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 247; Mature: 246

Protein sequence:

>247_residues
MAGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAAREGGSDPDSNPRLRAAIDKSLSNNMTRDTVERAIKRGAGELDGQ
VLETIIYEGYGPGGTAVLVETMTDNKNRTVSGVRNAFSKSGGNLGTDGSVAYLFDKKGIISYEGVDEDTVMDAALEAGAE
DVVTNEDGSIDVLTSPEDFGRVKDALDNAGLESVNAEVTMVPSTKADLDADTAPKFLRLIDNLEDHDDVQEVYHNAEISD
EVMEGLE

Sequences:

>Translated_247_residues
MAGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAAREGGSDPDSNPRLRAAIDKSLSNNMTRDTVERAIKRGAGELDGQ
VLETIIYEGYGPGGTAVLVETMTDNKNRTVSGVRNAFSKSGGNLGTDGSVAYLFDKKGIISYEGVDEDTVMDAALEAGAE
DVVTNEDGSIDVLTSPEDFGRVKDALDNAGLESVNAEVTMVPSTKADLDADTAPKFLRLIDNLEDHDDVQEVYHNAEISD
EVMEGLE
>Mature_246_residues
AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAAREGGSDPDSNPRLRAAIDKSLSNNMTRDTVERAIKRGAGELDGQV
LETIIYEGYGPGGTAVLVETMTDNKNRTVSGVRNAFSKSGGNLGTDGSVAYLFDKKGIISYEGVDEDTVMDAALEAGAED
VVTNEDGSIDVLTSPEDFGRVKDALDNAGLESVNAEVTMVPSTKADLDADTAPKFLRLIDNLEDHDDVQEVYHNAEISDE
VMEGLE

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family [H]

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=30.3643724696356, Blast_Score=138, Evalue=5e-33,
Organism=Escherichia coli, GI1788171, Length=246, Percent_Identity=72.3577235772358, Blast_Score=372, Evalue=1e-104,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=39.4067796610169, Blast_Score=168, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI17556100, Length=243, Percent_Identity=24.6913580246914, Blast_Score=76, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6321458, Length=267, Percent_Identity=32.9588014981273, Blast_Score=129, Evalue=3e-31,
Organism=Drosophila melanogaster, GI24583305, Length=256, Percent_Identity=32.03125, Blast_Score=98, Evalue=5e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002876
- InterPro:   IPR017856 [H]

Pfam domain/function: PF01709 DUF28 [H]

EC number: NA

Molecular weight: Translated: 26624; Mature: 26492

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAAREGGSDPDSNPRLRAAIDKSLSNN
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTVERAIKRGAGELDGQVLETIIYEGYGPGGTAVLVETMTDNKNRTVSGVRNAFSKS
CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC
GGNLGTDGSVAYLFDKKGIISYEGVDEDTVMDAALEAGAEDVVTNEDGSIDVLTSPEDFG
CCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCHHHEECCCCCEEEEECCHHHH
RVKDALDNAGLESVNAEVTMVPSTKADLDADTAPKFLRLIDNLEDHDDVQEVYHNAEISD
HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
EVMEGLE
HHHHCCC
>Mature Secondary Structure 
AGHSKWANIKHRKAAQDAKRGKLFTKFIRELTVAAREGGSDPDSNPRLRAAIDKSLSNN
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCC
MTRDTVERAIKRGAGELDGQVLETIIYEGYGPGGTAVLVETMTDNKNRTVSGVRNAFSKS
CCHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHC
GGNLGTDGSVAYLFDKKGIISYEGVDEDTVMDAALEAGAEDVVTNEDGSIDVLTSPEDFG
CCCCCCCCCEEEEEECCCEEEECCCCHHHHHHHHHHCCCHHHEECCCCCEEEEECCHHHH
RVKDALDNAGLESVNAEVTMVPSTKADLDADTAPKFLRLIDNLEDHDDVQEVYHNAEISD
HHHHHHHHCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHCCCCCH
EVMEGLE
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]