Click here to switch to the map view.

The map label for this gene is xylB [H]

Identifier: 157962106

GI number: 157962106

Start: 2767509

End: 2769026

Strand: Reverse

Name: xylB [H]

Synonym: Spea_2285

Alternate gene names: 157962106

Gene position: 2769026-2767509 (Counterclockwise)

Preceding gene: 157962107

Following gene: 157962105

Centisome position: 53.51

GC content: 49.87

Gene sequence:

>1518_bases
ATGAATATTGTCGCGGGTGTCGATTGTGGCACACAGGGCACTAAGGTCATTCTGGTTGATTTAGGCACATCTCGTGTGTT
GGCTGAATGTTCTGCTCCCCATGAGTTGATCTCTGAGTCAAACGGTCGTCGTGAGCAGCAGCCAAGTTGGTGGATTGATG
CCTTAGTGACAGCTTTCGAGCAGGCGGTATCGACGGCTAATGTCGATCCTAAAATGATTAAAGCCATCGGGGTGTCGGGT
CAGCAACACGGGCTTGTTGCCTTAGACAGCCAAGGTGAAGTCATTCGTCCAGCCAAACTTTGGTGTGACACGGAAACAGC
GCCAGAGAATGCACAGCTGTTGCAAATGCTAGGTGGCGAACAGGCGTGTATAGACAGGTTAGGCCTTAGGGTTGAAACCG
GTTACACGGCCTCGAAGATCCTGTGGATGAAGCAACATGAGCCTGAAAACTTTGCCAAGATTGCCCATATTCTACTGCCA
CATGATTACTTGAATTTCTGGCTAACGGGCGAGTACTGCGCCGACTTTGGCGATGCCTCTGGCACAGGTTTATTCGATGT
GCGTAATCGTTGTTGGAATGAGCATGTTTGTGCTCTTATCGACCCAAGCGGCAATCTATTTAAGGCGTTACCCGAGCTTA
ATCGTGCTGAAAAAGCCACTGGCGTGGTGATTGGTCAGGCAAAAGAGCGCTTAGGCTTGAGTGATAACGTTGTGGTCTCC
TCTGGCGGTGGCGATAACATGATGGGCGCAATCGGTACCGGTAACGTTAAAAACGGCATCATCACTATGTCGCTTGGCAC
CTCTGGCACCATATATACATTTTCTGATAAGCCAGTTGAGCTAAAGCATCCGAGTATTGCCAACTTCTGTTCGAGCTCAA
ATGGCTGGATGCCGCTTATCTGCACCATGAATGTCACGTCGGCAACGAGCTTGGTGCAAGACGTGCTCAAGATGAGTCTT
GCTGAGTTTAACCACTCGATTGAGGCTTCTCAGATCGGCGCCGGTAATATCTCATTTCTTCAGTTCTTTAATGGCGAGCG
GGTGCCTGCACTTCCTGATGGCAAAGCCTCTATCCATGGTTTAGATGCTGCCAACTTCACACGCGACAACTTAGTGCGCT
CTGTGGTTGAGGGCGCAACCTTTGGCCTTAAATACGGTTTGGAACTGCTACGTGGTGCAGGGATTAATATCGAGCAAATT
CGGTTAATTGGCGGTGGGGCGAAGTCTGCTCATTGGCGTCAAATGATTGCCGATACCATGAACTGCGAAGTGATCTGCCC
AGAAGTTGAAGAGGCGGCCGCGCTTGGGGCGGCGATTCAGGCGAGCTGGGCGTTAAAAGGAAGGATGGACAACGAGATCA
TTGAGCAGTTAATTGCGCTTAATGAAGAGAGTCGTACTCAGCCTAATTGCAACAACGTTGCACAGTATCAAGTCGCTTAT
GATCGCTATATCGATACGCTTTATAGCCAGTATCCACGGTTGGCAGAGGCGCAACTAACAGGGGGCTGTAATGAATAA

Upstream 100 bases:

>100_bases
CAGCAAGACCTATAAGTTTGAAGATTCACTAAAGGCCTATGCTAGAGCACTTGAAGCGAACCCTTCAGATGTAAAGATCA
TGATAGAGATGGAGTAAGCG

Downstream 100 bases:

>100_bases
GGCTCCTTTATTATCAGTCAATTCGGTTAAAAAGTCCTTTGGTGAGGTTAAAGCCCTTAAGCATATTAATTTCACCCTGA
ATGCTGGCGAAATCCATGCT

Product: xylulokinase

Products: NA

Alternate protein names: Xylulokinase [H]

Number of amino acids: Translated: 505; Mature: 505

Protein sequence:

>505_residues
MNIVAGVDCGTQGTKVILVDLGTSRVLAECSAPHELISESNGRREQQPSWWIDALVTAFEQAVSTANVDPKMIKAIGVSG
QQHGLVALDSQGEVIRPAKLWCDTETAPENAQLLQMLGGEQACIDRLGLRVETGYTASKILWMKQHEPENFAKIAHILLP
HDYLNFWLTGEYCADFGDASGTGLFDVRNRCWNEHVCALIDPSGNLFKALPELNRAEKATGVVIGQAKERLGLSDNVVVS
SGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLICTMNVTSATSLVQDVLKMSL
AEFNHSIEASQIGAGNISFLQFFNGERVPALPDGKASIHGLDAANFTRDNLVRSVVEGATFGLKYGLELLRGAGINIEQI
RLIGGGAKSAHWRQMIADTMNCEVICPEVEEAAALGAAIQASWALKGRMDNEIIEQLIALNEESRTQPNCNNVAQYQVAY
DRYIDTLYSQYPRLAEAQLTGGCNE

Sequences:

>Translated_505_residues
MNIVAGVDCGTQGTKVILVDLGTSRVLAECSAPHELISESNGRREQQPSWWIDALVTAFEQAVSTANVDPKMIKAIGVSG
QQHGLVALDSQGEVIRPAKLWCDTETAPENAQLLQMLGGEQACIDRLGLRVETGYTASKILWMKQHEPENFAKIAHILLP
HDYLNFWLTGEYCADFGDASGTGLFDVRNRCWNEHVCALIDPSGNLFKALPELNRAEKATGVVIGQAKERLGLSDNVVVS
SGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLICTMNVTSATSLVQDVLKMSL
AEFNHSIEASQIGAGNISFLQFFNGERVPALPDGKASIHGLDAANFTRDNLVRSVVEGATFGLKYGLELLRGAGINIEQI
RLIGGGAKSAHWRQMIADTMNCEVICPEVEEAAALGAAIQASWALKGRMDNEIIEQLIALNEESRTQPNCNNVAQYQVAY
DRYIDTLYSQYPRLAEAQLTGGCNE
>Mature_505_residues
MNIVAGVDCGTQGTKVILVDLGTSRVLAECSAPHELISESNGRREQQPSWWIDALVTAFEQAVSTANVDPKMIKAIGVSG
QQHGLVALDSQGEVIRPAKLWCDTETAPENAQLLQMLGGEQACIDRLGLRVETGYTASKILWMKQHEPENFAKIAHILLP
HDYLNFWLTGEYCADFGDASGTGLFDVRNRCWNEHVCALIDPSGNLFKALPELNRAEKATGVVIGQAKERLGLSDNVVVS
SGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLICTMNVTSATSLVQDVLKMSL
AEFNHSIEASQIGAGNISFLQFFNGERVPALPDGKASIHGLDAANFTRDNLVRSVVEGATFGLKYGLELLRGAGINIEQI
RLIGGGAKSAHWRQMIADTMNCEVICPEVEEAAALGAAIQASWALKGRMDNEIIEQLIALNEESRTQPNCNNVAQYQVAY
DRYIDTLYSQYPRLAEAQLTGGCNE

Specific function: Unknown

COG id: COG1070

COG function: function code G; Sugar (pentulose and hexulose) kinases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FGGY kinase family [H]

Homologues:

Organism=Homo sapiens, GI18860918, Length=533, Percent_Identity=22.8893058161351, Blast_Score=101, Evalue=2e-21,
Organism=Homo sapiens, GI42794763, Length=459, Percent_Identity=22.2222222222222, Blast_Score=72, Evalue=1e-12,
Organism=Homo sapiens, GI4504007, Length=459, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI189409120, Length=459, Percent_Identity=22.2222222222222, Blast_Score=70, Evalue=6e-12,
Organism=Escherichia coli, GI1789987, Length=498, Percent_Identity=32.7309236947791, Blast_Score=192, Evalue=4e-50,
Organism=Escherichia coli, GI1790005, Length=507, Percent_Identity=25.4437869822485, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1787789, Length=473, Percent_Identity=24.5243128964059, Blast_Score=90, Evalue=4e-19,
Organism=Escherichia coli, GI1790361, Length=456, Percent_Identity=21.2719298245614, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1789168, Length=463, Percent_Identity=20.9503239740821, Blast_Score=78, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17554530, Length=513, Percent_Identity=22.4171539961014, Blast_Score=86, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17535599, Length=455, Percent_Identity=19.7802197802198, Blast_Score=65, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6321633, Length=357, Percent_Identity=26.890756302521, Blast_Score=85, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21356607, Length=450, Percent_Identity=24.2222222222222, Blast_Score=89, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000577
- InterPro:   IPR018485
- InterPro:   IPR018483
- InterPro:   IPR018484
- InterPro:   IPR006000 [H]

Pfam domain/function: PF02782 FGGY_C; PF00370 FGGY_N [H]

EC number: =2.7.1.17 [H]

Molecular weight: Translated: 54554; Mature: 54554

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: PS00933 FGGY_KINASES_1 ; PS00445 FGGY_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIVAGVDCGTQGTKVILVDLGTSRVLAECSAPHELISESNGRREQQPSWWIDALVTAFE
CCEEEECCCCCCCCEEEEEECCCCHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH
QAVSTANVDPKMIKAIGVSGQQHGLVALDSQGEVIRPAKLWCDTETAPENAQLLQMLGGE
HHHHHCCCCHHHHHHHCCCCCCCCEEEECCCCCEECCHHEEECCCCCCCHHHHHHHHCCC
QACIDRLGLRVETGYTASKILWMKQHEPENFAKIAHILLPHDYLNFWLTGEYCADFGDAS
HHHHHHCCCEEECCCCHHEEEEEECCCCHHHHHHHHHHCCCHHHHEEEEHHHHHCCCCCC
GTGLFDVRNRCWNEHVCALIDPSGNLFKALPELNRAEKATGVVIGQAKERLGLSDNVVVS
CCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCEEEEECHHHHCCCCCCEEEE
SGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLI
CCCCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCCCEEECCCCHHHHHCCCCCCEEEE
CTMNVTSATSLVQDVLKMSLAEFNHSIEASQIGAGNISFLQFFNGERVPALPDGKASIHG
EEECCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEE
LDAANFTRDNLVRSVVEGATFGLKYGLELLRGAGINIEQIRLIGGGAKSAHWRQMIADTM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCC
NCEVICPEVEEAAALGAAIQASWALKGRMDNEIIEQLIALNEESRTQPNCNNVAQYQVAY
CCEEECCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
DRYIDTLYSQYPRLAEAQLTGGCNE
HHHHHHHHHHCCCHHHHHCCCCCCC
>Mature Secondary Structure
MNIVAGVDCGTQGTKVILVDLGTSRVLAECSAPHELISESNGRREQQPSWWIDALVTAFE
CCEEEECCCCCCCCEEEEEECCCCHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHH
QAVSTANVDPKMIKAIGVSGQQHGLVALDSQGEVIRPAKLWCDTETAPENAQLLQMLGGE
HHHHHCCCCHHHHHHHCCCCCCCCEEEECCCCCEECCHHEEECCCCCCCHHHHHHHHCCC
QACIDRLGLRVETGYTASKILWMKQHEPENFAKIAHILLPHDYLNFWLTGEYCADFGDAS
HHHHHHCCCEEECCCCHHEEEEEECCCCHHHHHHHHHHCCCHHHHEEEEHHHHHCCCCCC
GTGLFDVRNRCWNEHVCALIDPSGNLFKALPELNRAEKATGVVIGQAKERLGLSDNVVVS
CCCHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHCEEEEECHHHHCCCCCCEEEE
SGGGDNMMGAIGTGNVKNGIITMSLGTSGTIYTFSDKPVELKHPSIANFCSSSNGWMPLI
CCCCCCCEEEECCCCCCCCEEEEEECCCCEEEEECCCCEEECCCCHHHHHCCCCCCEEEE
CTMNVTSATSLVQDVLKMSLAEFNHSIEASQIGAGNISFLQFFNGERVPALPDGKASIHG
EEECCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCEEEEEEECCCCCCCCCCCCCCEEE
LDAANFTRDNLVRSVVEGATFGLKYGLELLRGAGINIEQIRLIGGGAKSAHWRQMIADTM
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCC
NCEVICPEVEEAAALGAAIQASWALKGRMDNEIIEQLIALNEESRTQPNCNNVAQYQVAY
CCEEECCCHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHH
DRYIDTLYSQYPRLAEAQLTGGCNE
HHHHHHHHHHCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]