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The map label for this gene is rbsC [H]

Identifier: 157962104

GI number: 157962104

Start: 2764984

End: 2766021

Strand: Reverse

Name: rbsC [H]

Synonym: Spea_2283

Alternate gene names: 157962104

Gene position: 2766021-2764984 (Counterclockwise)

Preceding gene: 157962105

Following gene: 157962103

Centisome position: 53.45

GC content: 47.5

Gene sequence:

>1038_bases
ATGAATACATCTGTTGCTACAGATAAGAGTCTGAGATTACCTATTACTCGACTAAAACCGATTTTACACAAATACGGTAT
CGTGTTGGCGTTTCTGTTTATTTGCGCCACCATCGCCGTATTAGGCGAGATCTGTATCCACAATGGCATGTGGGATAGTA
ACTATTTTCTTACTCAAGGAAATCTGCTGTCTGTTTTACGTCAGGTCTCTATTAACGGCATTTTAGCCGTGGGTATGACC
TTCGTGATTATTGTGGCTGGGGTCGACCTCTCGGTGGGGTCGGTGCTGGCGCTCGCCGGTATTGTTTCAGCACGCTTTGT
GACAAATTCATCCAACATGCTGATTGGTGGTTTTGATTCGCCTATCTTACTGCCGCTAATGGTGGCTATCTGTATCGGTG
CTATTTGTGGCTTTTTGAACGGTTACATTATTTCAAAATTCCGTCTGCAAGCCTTTATCGTGACCATGGGTATGCTGTCA
GTAGCCCGAGGCATGACCATGTTGACGACTGATGGTAATCCGGTTTCGTCGCTGGATCGCGGCTTTCGTGCACTAGGTAA
TAGCTACACTTTTGGCATCCCAACACCTGTGGTGATTTTTGCCGTCATCTTCGTTGCTGCTTGGTTCTTACTTAATAAGA
CAGTTTTCGGTCGCTATGTATTTGCGGTGGGCGGTAATGAAAAGTCGGCTCAGACCTCTGGCATCGACGTACATAAGGTT
AAAGTTGCTGTTTACACCCTGTGTGGCGTGATGGCGGCAATTGCGGGTTTGATCTTGACTGCACGTACAGGCTCGGCGCA
AACCAGTGCGGGCTTTGGCTATGAGCTTGACGCTATTGCCGCTGTGGTCATTGGCGGCACCTCAATGGCTGGTGGACTCG
GTACGCTTACCGGCACTTTGTTTGGGGTACTGATTATCGGGGTGATGAATAACGGTTTAGATCTACTCGGCGTTCAGTCT
TACTACCAACAAATTATCAAAGGCTTACTCATTGTTGCGGCAGTGATGTTAGACCCTTCTAGAAAGCAGTCACGTTAG

Upstream 100 bases:

>100_bases
CGCATTATTGTGTTTAAAAATGGTGAGCTTGTCAGTGAACTGTCACAGGCAGAAGCCAGCCAACAACTGTTATTAAGTAT
TGCTTCTTAGGATATAAAAA

Downstream 100 bases:

>100_bases
AAGCAATCTCTTTAAAAGTGGTCTCTTTAAAAAGAGCAGAGTTAAAAATAAAAAGAAAAAGGTATGATTAAAATGAAAAA
AACCATTATCTCTACATTAC

Product: monosaccharide-transporting ATPase

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 345; Mature: 345

Protein sequence:

>345_residues
MNTSVATDKSLRLPITRLKPILHKYGIVLAFLFICATIAVLGEICIHNGMWDSNYFLTQGNLLSVLRQVSINGILAVGMT
FVIIVAGVDLSVGSVLALAGIVSARFVTNSSNMLIGGFDSPILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLS
VARGMTMLTTDGNPVSSLDRGFRALGNSYTFGIPTPVVIFAVIFVAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
KVAVYTLCGVMAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTLFGVLIIGVMNNGLDLLGVQS
YYQQIIKGLLIVAAVMLDPSRKQSR

Sequences:

>Translated_345_residues
MNTSVATDKSLRLPITRLKPILHKYGIVLAFLFICATIAVLGEICIHNGMWDSNYFLTQGNLLSVLRQVSINGILAVGMT
FVIIVAGVDLSVGSVLALAGIVSARFVTNSSNMLIGGFDSPILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLS
VARGMTMLTTDGNPVSSLDRGFRALGNSYTFGIPTPVVIFAVIFVAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
KVAVYTLCGVMAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTLFGVLIIGVMNNGLDLLGVQS
YYQQIIKGLLIVAAVMLDPSRKQSR
>Mature_345_residues
MNTSVATDKSLRLPITRLKPILHKYGIVLAFLFICATIAVLGEICIHNGMWDSNYFLTQGNLLSVLRQVSINGILAVGMT
FVIIVAGVDLSVGSVLALAGIVSARFVTNSSNMLIGGFDSPILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLS
VARGMTMLTTDGNPVSSLDRGFRALGNSYTFGIPTPVVIFAVIFVAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
KVAVYTLCGVMAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTLFGVLIIGVMNNGLDLLGVQS
YYQQIIKGLLIVAAVMLDPSRKQSR

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1172

COG function: function code G; Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=298, Percent_Identity=48.993288590604, Blast_Score=257, Evalue=8e-70,
Organism=Escherichia coli, GI1790524, Length=338, Percent_Identity=36.6863905325444, Blast_Score=196, Evalue=2e-51,
Organism=Escherichia coli, GI1788896, Length=284, Percent_Identity=38.7323943661972, Blast_Score=181, Evalue=9e-47,
Organism=Escherichia coli, GI145693152, Length=327, Percent_Identity=33.6391437308869, Blast_Score=180, Evalue=1e-46,
Organism=Escherichia coli, GI1789992, Length=349, Percent_Identity=33.810888252149, Blast_Score=167, Evalue=1e-42,
Organism=Escherichia coli, GI1788471, Length=291, Percent_Identity=39.8625429553265, Blast_Score=144, Evalue=8e-36,
Organism=Escherichia coli, GI87082395, Length=278, Percent_Identity=35.2517985611511, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI145693214, Length=266, Percent_Identity=33.4586466165414, Blast_Score=128, Evalue=6e-31,
Organism=Escherichia coli, GI1787793, Length=292, Percent_Identity=29.4520547945205, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787794, Length=272, Percent_Identity=28.3088235294118, Blast_Score=106, Evalue=3e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36278; Mature: 36278

Theoretical pI: Translated: 9.71; Mature: 9.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTSVATDKSLRLPITRLKPILHKYGIVLAFLFICATIAVLGEICIHNGMWDSNYFLTQG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
NLLSVLRQVSINGILAVGMTFVIIVAGVDLSVGSVLALAGIVSARFVTNSSNMLIGGFDS
HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCC
PILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLSVARGMTMLTTDGNPVSSLDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
GFRALGNSYTFGIPTPVVIFAVIFVAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHH
KVAVYTLCGVMAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
FGVLIIGVMNNGLDLLGVQSYYQQIIKGLLIVAAVMLDPSRKQSR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNTSVATDKSLRLPITRLKPILHKYGIVLAFLFICATIAVLGEICIHNGMWDSNYFLTQG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
NLLSVLRQVSINGILAVGMTFVIIVAGVDLSVGSVLALAGIVSARFVTNSSNMLIGGFDS
HHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHEEECCCCEEEECCCC
PILLPLMVAICIGAICGFLNGYIISKFRLQAFIVTMGMLSVARGMTMLTTDGNPVSSLDR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHH
GFRALGNSYTFGIPTPVVIFAVIFVAAWFLLNKTVFGRYVFAVGGNEKSAQTSGIDVHKV
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHHH
KVAVYTLCGVMAAIAGLILTARTGSAQTSAGFGYELDAIAAVVIGGTSMAGGLGTLTGTL
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHH
FGVLIIGVMNNGLDLLGVQSYYQQIIKGLLIVAAVMLDPSRKQSR
HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]