| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
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The map label for this gene is 157962028
Identifier: 157962028
GI number: 157962028
Start: 2676990
End: 2677928
Strand: Reverse
Name: 157962028
Synonym: Spea_2207
Alternate gene names: NA
Gene position: 2677928-2676990 (Counterclockwise)
Preceding gene: 157962029
Following gene: 157962023
Centisome position: 51.75
GC content: 35.25
Gene sequence:
>939_bases ATGAAAAGAAAACAACTTAAACCTTTTTGGAAGCTTAGACATGCTCAGAAATTTGTTGAACTACGTAATTGGCTCAATGG TCGAGTAACTCTTAAAGCACGCCAAGACCCACTAAATTCAATTATGTCTGTGGATAATACGACTCTTTCTGTTGCTAACG CATTTCATAATATTCGATTTGCATTTGTTGCGCCTTGGGTTTTATGTGGGTGGATATTATTACTCATCCAAATAAGTACT TTTGGTCCAAACGAAGGGGAAGTTTCTTTTGCAAACAGTAATATAAATTTGAAAAAAGAGCTTATAGTTAAAGGAATTAA TTATGATGAAAGTGATTATATCTACTATGAAGCATTAGTGGGAAAGGATGGGGAAAGCTCTATATTAGAGTATATCGATG CTGTGAGTAATTACGGTGGGGAAAGTTATAAGGATAGTGTATATCTAGATATTATTATTATTTGTGTTTTACTCGTTATA TCAATGATGGCTACAGTTGCTTTTCTTCGCCTACCTAGAATGGCTGATATTTATTTTGATCGTCAGCGCAAGATAGTATA CACGTGGCGCTTTGGGAAAATAGCAGCATGCAACTTTGATAACCTTGGAGCTCGTGAAAACATGCATGGACTTGCTCTTT TTTTATATAGTGAAAACAAGAAGCAAGAATCAGGTTATTGGCCAACATACTTTCTTATTCAACCAACGGGCAGAGCCCAC TTTAATAATGAGAATGATAATACTGAATTTATGGCTCAACTTTTTGCCTTTATGGAGAAAGGTAAAAGTGCAGTAATTAC AGAGGAAAGGTTTGAGCGCCCTCAACCCAAATCGTATTTGTTCATTGATAAAAAACCAGAAAACTTCGAGCAAAGGTTGG AAGAAATTTTAAAAAGAGATGATGAGCTACCTAAATTGTATGCAGAGCATGTGTTTTAA
Upstream 100 bases:
>100_bases TGCAACAAAGCCTTCCAAAGCGCATGCTAAGTCAGAATGGCCTTATCGAACGTGCTTTTATTGGCATGAAAGATAACGAA TTACTTTAATAAGAATAAGA
Downstream 100 bases:
>100_bases TCATTGGCGATTTCTGTGGGGAAGATAAATGAATCAGGCTTCATTCGAAGCTAACCAACTTTGGAGAAGGAGTGAGATAT GTCACTGATGCCTGATTGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MKRKQLKPFWKLRHAQKFVELRNWLNGRVTLKARQDPLNSIMSVDNTTLSVANAFHNIRFAFVAPWVLCGWILLLIQIST FGPNEGEVSFANSNINLKKELIVKGINYDESDYIYYEALVGKDGESSILEYIDAVSNYGGESYKDSVYLDIIIICVLLVI SMMATVAFLRLPRMADIYFDRQRKIVYTWRFGKIAACNFDNLGARENMHGLALFLYSENKKQESGYWPTYFLIQPTGRAH FNNENDNTEFMAQLFAFMEKGKSAVITEERFERPQPKSYLFIDKKPENFEQRLEEILKRDDELPKLYAEHVF
Sequences:
>Translated_312_residues MKRKQLKPFWKLRHAQKFVELRNWLNGRVTLKARQDPLNSIMSVDNTTLSVANAFHNIRFAFVAPWVLCGWILLLIQIST FGPNEGEVSFANSNINLKKELIVKGINYDESDYIYYEALVGKDGESSILEYIDAVSNYGGESYKDSVYLDIIIICVLLVI SMMATVAFLRLPRMADIYFDRQRKIVYTWRFGKIAACNFDNLGARENMHGLALFLYSENKKQESGYWPTYFLIQPTGRAH FNNENDNTEFMAQLFAFMEKGKSAVITEERFERPQPKSYLFIDKKPENFEQRLEEILKRDDELPKLYAEHVF >Mature_312_residues MKRKQLKPFWKLRHAQKFVELRNWLNGRVTLKARQDPLNSIMSVDNTTLSVANAFHNIRFAFVAPWVLCGWILLLIQIST FGPNEGEVSFANSNINLKKELIVKGINYDESDYIYYEALVGKDGESSILEYIDAVSNYGGESYKDSVYLDIIIICVLLVI SMMATVAFLRLPRMADIYFDRQRKIVYTWRFGKIAACNFDNLGARENMHGLALFLYSENKKQESGYWPTYFLIQPTGRAH FNNENDNTEFMAQLFAFMEKGKSAVITEERFERPQPKSYLFIDKKPENFEQRLEEILKRDDELPKLYAEHVF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36400; Mature: 36400
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKQLKPFWKLRHAQKFVELRNWLNGRVTLKARQDPLNSIMSVDNTTLSVANAFHNIRF CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHH AFVAPWVLCGWILLLIQISTFGPNEGEVSFANSNINLKKELIVKGINYDESDYIYYEALV HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEHHHEEECCCCCCCCEEEEEEEE GKDGESSILEYIDAVSNYGGESYKDSVYLDIIIICVLLVISMMATVAFLRLPRMADIYFD CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC RQRKIVYTWRFGKIAACNFDNLGARENMHGLALFLYSENKKQESGYWPTYFLIQPTGRAH CCCEEEEEEECCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCC FNNENDNTEFMAQLFAFMEKGKSAVITEERFERPQPKSYLFIDKKPENFEQRLEEILKRD CCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCC DELPKLYAEHVF CCHHHHHHHHCC >Mature Secondary Structure MKRKQLKPFWKLRHAQKFVELRNWLNGRVTLKARQDPLNSIMSVDNTTLSVANAFHNIRF CCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHH AFVAPWVLCGWILLLIQISTFGPNEGEVSFANSNINLKKELIVKGINYDESDYIYYEALV HHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCEEHHHEEECCCCCCCCEEEEEEEE GKDGESSILEYIDAVSNYGGESYKDSVYLDIIIICVLLVISMMATVAFLRLPRMADIYFD CCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCC RQRKIVYTWRFGKIAACNFDNLGARENMHGLALFLYSENKKQESGYWPTYFLIQPTGRAH CCCEEEEEEECCEEEEECCCCCCCCCCCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCC FNNENDNTEFMAQLFAFMEKGKSAVITEERFERPQPKSYLFIDKKPENFEQRLEEILKRD CCCCCCCHHHHHHHHHHHHCCCCEEEEHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHCC DELPKLYAEHVF CCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA