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The map label for this gene is 157961949

Identifier: 157961949

GI number: 157961949

Start: 2578799

End: 2579803

Strand: Reverse

Name: 157961949

Synonym: Spea_2128

Alternate gene names: NA

Gene position: 2579803-2578799 (Counterclockwise)

Preceding gene: 157961957

Following gene: 157961948

Centisome position: 49.86

GC content: 43.98

Gene sequence:

>1005_bases
ATGCATATAATTTTTACTATCTCTATTTCATTGATTGTCGCCGCAGCCGGAATTATTGCTTTTTCGGAAAGAGAAACAGC
ACCACTCGCTCACAGTAGCATCCCCATTACTAATATGAACGTCACCAATGTTGTCGCTACATCTGCTGGACTCGTCGCCA
GTGGTGAGCTTGGGACGATATTGTTATCTAAAGATGAGGGGAAGACATGGAATATGAGCAATATCGATACTCAGCGCTAT
GCGTTGATCACCCGGATGTTGTTTGACAGCCCTGATTTTGGGCTGGCTATTGGCCATGAGGGCTGGATCTTAAAAACAAC
TGACGGCGGACTTAACTGGCGAGAAGTCGCATTCGACCCATCTGCCAGTGACCCTTTATTCAGTATTGCCAAACTAAATA
GTGGTCAATGGTTAACTGTAGGTGCGTTTGGCAATTCAATGGTTTCCAACGATAACGGTGAAAACTGGAATAAAATTGCC
GCTCCAGCGGCCACGGATTGGCATTTAAATCGACTAATCTCTGACGACAACAAACAAAATTGGTTAATTGTTGGCGAGGC
AGGCACGGTTCTGCGTTCACAAAATGGCGCTGACAATTGGCAAGAATTAGCAGCATTTTACGATGGGTCGCTATATGGAG
GACTGCATTTAGGCGGTTCAAAATGGATTGTGTATGGGATGAGAGGCAATATTTTTCGTAGTGAAGATAATGGTGATAGC
TGGCATAAAATCAACTTCCCCTACCCCATTTCTTTGTTTAATCACCTTTTATTACCAAGTGGAGAGTTGCTCATCGCGGG
CCAAGGAGGAATTGTACTGGCGAGTGATGATCAAGGAGAAACGTTCAAAATCATCCAAGGTGGTGGACGTTTATCAATTA
CTGATCTGTTAATGCTACCTGATGGCCGATTACTGTTTGCAACTGACTCTGGAGTGGTACATCCAGCCACAAACAGCACA
GGGTTAATACCAAGCACACCTAATACTAATAATTCAAATAGCTAG

Upstream 100 bases:

>100_bases
AAACAATGCCATTCATTTTATCGTTTAAGTTGAACGTGCTATTTCACCAGTGAAAGCCAGAGGCTTTGCTGCTATAGCAA
AGTTACTACTGGGAGTAGTT

Downstream 100 bases:

>100_bases
CCCTGGAGTTCTTTATGTCACTGTCTCAATCTAGCTCAAATAGCTCCACTGAAATCAGCTTACTCAAACGTTTTGTCGAC
TTCAGTGCCCGTCAGCTCAT

Product: BNR repeat-containing glycosyl hydrolase

Products: NA

Alternate protein names: BNR Repeat-Containing Protein; BNR/Asp-Box Repeat-Containing Protein; Glycosyl Hydrolase; BNR Domain-Containing Protein; BNR/Asp-Box Repeat Domain Protein; Glycosyl Hydrolase BNR Repeat; Glycosyl Hydrolase BNR Repeat Protein; BNR/Asp-Box Repeat Protein; Plant Photosystem II Stability/Assembly Factor Protein; Glycosyl Hydrolase BNR Repeat-Containing Glycosyl Hydrolase; Glycosyl Hydrolase BNR Protein; Protein Related Photosystem II Stability/Assembly Factor; Oxidoreductase

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MHIIFTISISLIVAAAGIIAFSERETAPLAHSSIPITNMNVTNVVATSAGLVASGELGTILLSKDEGKTWNMSNIDTQRY
ALITRMLFDSPDFGLAIGHEGWILKTTDGGLNWREVAFDPSASDPLFSIAKLNSGQWLTVGAFGNSMVSNDNGENWNKIA
APAATDWHLNRLISDDNKQNWLIVGEAGTVLRSQNGADNWQELAAFYDGSLYGGLHLGGSKWIVYGMRGNIFRSEDNGDS
WHKINFPYPISLFNHLLLPSGELLIAGQGGIVLASDDQGETFKIIQGGGRLSITDLLMLPDGRLLFATDSGVVHPATNST
GLIPSTPNTNNSNS

Sequences:

>Translated_334_residues
MHIIFTISISLIVAAAGIIAFSERETAPLAHSSIPITNMNVTNVVATSAGLVASGELGTILLSKDEGKTWNMSNIDTQRY
ALITRMLFDSPDFGLAIGHEGWILKTTDGGLNWREVAFDPSASDPLFSIAKLNSGQWLTVGAFGNSMVSNDNGENWNKIA
APAATDWHLNRLISDDNKQNWLIVGEAGTVLRSQNGADNWQELAAFYDGSLYGGLHLGGSKWIVYGMRGNIFRSEDNGDS
WHKINFPYPISLFNHLLLPSGELLIAGQGGIVLASDDQGETFKIIQGGGRLSITDLLMLPDGRLLFATDSGVVHPATNST
GLIPSTPNTNNSNS
>Mature_334_residues
MHIIFTISISLIVAAAGIIAFSERETAPLAHSSIPITNMNVTNVVATSAGLVASGELGTILLSKDEGKTWNMSNIDTQRY
ALITRMLFDSPDFGLAIGHEGWILKTTDGGLNWREVAFDPSASDPLFSIAKLNSGQWLTVGAFGNSMVSNDNGENWNKIA
APAATDWHLNRLISDDNKQNWLIVGEAGTVLRSQNGADNWQELAAFYDGSLYGGLHLGGSKWIVYGMRGNIFRSEDNGDS
WHKINFPYPISLFNHLLLPSGELLIAGQGGIVLASDDQGETFKIIQGGGRLSITDLLMLPDGRLLFATDSGVVHPATNST
GLIPSTPNTNNSNS

Specific function: Unknown

COG id: COG4447

COG function: function code R; Uncharacterized protein related to plant photosystem II stability/assembly factor

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35872; Mature: 35872

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHIIFTISISLIVAAAGIIAFSERETAPLAHSSIPITNMNVTNVVATSAGLVASGELGTI
CEEEEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCEECCCHHHEEEECCCEEECCCCEEE
LLSKDEGKTWNMSNIDTQRYALITRMLFDSPDFGLAIGHEGWILKTTDGGLNWREVAFDP
EEECCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCEEEEEECC
SASDPLFSIAKLNSGQWLTVGAFGNSMVSNDNGENWNKIAAPAATDWHLNRLISDDNKQN
CCCCCEEEEEECCCCCEEEEEECCCCEECCCCCCCCCEEECCCCCCHHHHHHHCCCCCCC
WLIVGEAGTVLRSQNGADNWQELAAFYDGSLYGGLHLGGSKWIVYGMRGNIFRSEDNGDS
EEEEECCCCEEECCCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEECCCCCCC
WHKINFPYPISLFNHLLLPSGELLIAGQGGIVLASDDQGETFKIIQGGGRLSITDLLMLP
EEEECCCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCEEEEEECCCEEEEEEEEECC
DGRLLFATDSGVVHPATNSTGLIPSTPNTNNSNS
CCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MHIIFTISISLIVAAAGIIAFSERETAPLAHSSIPITNMNVTNVVATSAGLVASGELGTI
CEEEEEEHHHHHHHHHHHEEECCCCCCCCCCCCCCEECCCHHHEEEECCCEEECCCCEEE
LLSKDEGKTWNMSNIDTQRYALITRMLFDSPDFGLAIGHEGWILKTTDGGLNWREVAFDP
EEECCCCCEECCCCCCHHHHHHHHHHHHCCCCCCEEECCCCEEEEECCCCCCEEEEEECC
SASDPLFSIAKLNSGQWLTVGAFGNSMVSNDNGENWNKIAAPAATDWHLNRLISDDNKQN
CCCCCEEEEEECCCCCEEEEEECCCCEECCCCCCCCCEEECCCCCCHHHHHHHCCCCCCC
WLIVGEAGTVLRSQNGADNWQELAAFYDGSLYGGLHLGGSKWIVYGMRGNIFRSEDNGDS
EEEEECCCCEEECCCCCCHHHHHHHHHCCCEEEEEEECCCEEEEEECCCCEEECCCCCCC
WHKINFPYPISLFNHLLLPSGELLIAGQGGIVLASDDQGETFKIIQGGGRLSITDLLMLP
EEEECCCCHHHHHHHHHCCCCCEEEECCCCEEEEECCCCCEEEEEECCCEEEEEEEEECC
DGRLLFATDSGVVHPATNSTGLIPSTPNTNNSNS
CCCEEEEECCCEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA