| Definition | Shewanella pealeana ATCC 700345 chromosome, complete genome. |
|---|---|
| Accession | NC_009901 |
| Length | 5,174,581 |
Click here to switch to the map view.
The map label for this gene is 157961924
Identifier: 157961924
GI number: 157961924
Start: 2546011
End: 2546343
Strand: Direct
Name: 157961924
Synonym: Spea_2103
Alternate gene names: NA
Gene position: 2546011-2546343 (Clockwise)
Preceding gene: 157961923
Following gene: 157961927
Centisome position: 49.2
GC content: 37.84
Gene sequence:
>333_bases ATGTATTCTACTCGACAACAGAGTCTGCAATATAGCGGCTTAGCTTCTCAAATTATTAATGACGATAAGTTAGCGATCCT TCGTCATAGCGTACAGATCTCTATTAAACTTACCCAAAGAATGCTGCTTAAGCGTTACCTCAGTGTCGAACAGATTTCAG CATTAACACTGTTAAATTTAAAATCAGAATCACTTGAGTTGCACCGGGCTATTTTGTGTGCGGATATTGGTACAACGGAA AGAAATATTTTACTCGGTTATATCAATCACAATATCGATTCAATTGATGAGGCTATCAGTGTCAGGGCTGTGAATAGACC GCTCATTAATTGA
Upstream 100 bases:
>100_bases ATTCATTAAGTATGAGTACAGTTCTAGATTGTTAAGATTTGCCTCAGAAAGCCCACACTTTGTGGGCTACTCCTAATACC AATCAGGATAAGAGGTGGGT
Downstream 100 bases:
>100_bases AGCTTTTTAATAGGATATTAGTAATACAAGATTCTATGGCTAAATGTGATTTATTTTGGCTGAATTCTTAGCGGATTACC CTGAATGACGCATTAACCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MYSTRQQSLQYSGLASQIINDDKLAILRHSVQISIKLTQRMLLKRYLSVEQISALTLLNLKSESLELHRAILCADIGTTE RNILLGYINHNIDSIDEAISVRAVNRPLIN
Sequences:
>Translated_110_residues MYSTRQQSLQYSGLASQIINDDKLAILRHSVQISIKLTQRMLLKRYLSVEQISALTLLNLKSESLELHRAILCADIGTTE RNILLGYINHNIDSIDEAISVRAVNRPLIN >Mature_110_residues MYSTRQQSLQYSGLASQIINDDKLAILRHSVQISIKLTQRMLLKRYLSVEQISALTLLNLKSESLELHRAILCADIGTTE RNILLGYINHNIDSIDEAISVRAVNRPLIN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12461; Mature: 12461
Theoretical pI: Translated: 9.10; Mature: 9.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYSTRQQSLQYSGLASQIINDDKLAILRHSVQISIKLTQRMLLKRYLSVEQISALTLLNL CCCCHHHHHHHHHHHHHHCCCCHHEEEEHEEEEEEHHHHHHHHHHHHCHHHHHHHHHCCC KSESLELHRAILCADIGTTERNILLGYINHNIDSIDEAISVRAVNRPLIN CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MYSTRQQSLQYSGLASQIINDDKLAILRHSVQISIKLTQRMLLKRYLSVEQISALTLLNL CCCCHHHHHHHHHHHHHHCCCCHHEEEEHEEEEEEHHHHHHHHHHHHCHHHHHHHHHCCC KSESLELHRAILCADIGTTERNILLGYINHNIDSIDEAISVRAVNRPLIN CCHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA