Click here to switch to the map view.

The map label for this gene is 157961833

Identifier: 157961833

GI number: 157961833

Start: 2438231

End: 2439049

Strand: Direct

Name: 157961833

Synonym: Spea_2012

Alternate gene names: NA

Gene position: 2438231-2439049 (Clockwise)

Preceding gene: 157961832

Following gene: 157961834

Centisome position: 47.12

GC content: 40.54

Gene sequence:

>819_bases
ATGAATAATAAAACCGTCTTATTTGTCATTTTGTCATTAGTGTTTGGAGTTACTGCTGTTTATCTTGCGCAGAACTGGCT
GAAAACAAATACTAAAACAGAAGCAGTAGCATCAACATCCAATGTGATGACTATGGTGACAGAGGTACCTTTGGGGACAA
TTATAGAAAGAAAGCATCTCGCCTTAACTCCAGTGGCTGACAATTTAATCCCAGAAGGGGCTATCACGGATATTACCGAG
GCAGAAGGGTTTGTGGTCAAGCATCGACTTTATCAAGGGGAGGTATTACGCAAAGAGCGAATAACTCCTAAAGGAGAGGG
GAGCACATTAGCCAGTTTGATTACCCCGACAATGCGTGCTGTTACGATAAGGGTAAACGATGTTGTTGGTGTGGCTGGTT
TCCTACTGCCTGGCAACAGAGTCGATATTATCAATATTTTTACAACTCCTAGTCTAAAAACGGACATTGTGCTTTCAAAC
GTGAAAATTCTCGCTATCGACCAAAAAGCATCGAATGATGAGAACAAACCAGTCTTAGTGCGAGCGGTAACATTAGAATT
AAGCTTAGAGCAGGCTGAAACCTTGATGATTGCCAAGAGTCGAGGTTCTTTGCAGTTGGCATTAAGAAATCCCAATGACA
CGGCAGTTATAGAATTAGCAGATATTGAAGAAGCGAATAAAACAGAAAAGACTGATAAAGAAGTGCTTTCTCAAACTGTT
AAAGTCGCACAGTTTGCCAGAGTATCTGAAGCTAGCACAAATAAGGTTTTGTTGCTTAAAGGCATGAGTGAGCAAGAGAT
AAAAATCGACAACAATTAA

Upstream 100 bases:

>100_bases
TTAGTTTTATGGAATTTGAACCTGTGGTTACGCCATCCTTGGTTGATTCTTCTTGGTCAATATATTTTGTATAGAAAGGT
TACATTTTTAGGAGCGACAA

Downstream 100 bases:

>100_bases
TTTGTTAGCATCGATCAAATAGATTCATGTTTTAAGGAGAATAACATGTCATTCCTTCGCCACTGTTCAATTGTTTGTTT
ATTGGCATTATTACAGCTAT

Product: SAF domain-containing protein

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein; Flp Pilus Assembly CpaB Domain Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; CtpC Protein; Pilus Assembly-Related Exported Protein; Flp Pilus Assembly Protein Cpab; CpaB2 Pilus Assembly Protein; CpaB Family Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MNNKTVLFVILSLVFGVTAVYLAQNWLKTNTKTEAVASTSNVMTMVTEVPLGTIIERKHLALTPVADNLIPEGAITDITE
AEGFVVKHRLYQGEVLRKERITPKGEGSTLASLITPTMRAVTIRVNDVVGVAGFLLPGNRVDIINIFTTPSLKTDIVLSN
VKILAIDQKASNDENKPVLVRAVTLELSLEQAETLMIAKSRGSLQLALRNPNDTAVIELADIEEANKTEKTDKEVLSQTV
KVAQFARVSEASTNKVLLLKGMSEQEIKIDNN

Sequences:

>Translated_272_residues
MNNKTVLFVILSLVFGVTAVYLAQNWLKTNTKTEAVASTSNVMTMVTEVPLGTIIERKHLALTPVADNLIPEGAITDITE
AEGFVVKHRLYQGEVLRKERITPKGEGSTLASLITPTMRAVTIRVNDVVGVAGFLLPGNRVDIINIFTTPSLKTDIVLSN
VKILAIDQKASNDENKPVLVRAVTLELSLEQAETLMIAKSRGSLQLALRNPNDTAVIELADIEEANKTEKTDKEVLSQTV
KVAQFARVSEASTNKVLLLKGMSEQEIKIDNN
>Mature_272_residues
MNNKTVLFVILSLVFGVTAVYLAQNWLKTNTKTEAVASTSNVMTMVTEVPLGTIIERKHLALTPVADNLIPEGAITDITE
AEGFVVKHRLYQGEVLRKERITPKGEGSTLASLITPTMRAVTIRVNDVVGVAGFLLPGNRVDIINIFTTPSLKTDIVLSN
VKILAIDQKASNDENKPVLVRAVTLELSLEQAETLMIAKSRGSLQLALRNPNDTAVIELADIEEANKTEKTDKEVLSQTV
KVAQFARVSEASTNKVLLLKGMSEQEIKIDNN

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29660; Mature: 29660

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNNKTVLFVILSLVFGVTAVYLAQNWLKTNTKTEAVASTSNVMTMVTEVPLGTIIERKHL
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEEEECCCCHHHCCCCCE
ALTPVADNLIPEGAITDITEAEGFVVKHRLYQGEVLRKERITPKGEGSTLASLITPTMRA
EECCCHHHCCCCCCCCCCCCCCCEEEEEEHHCCHHHHHHCCCCCCCCCHHHHHHCCCEEE
VTIRVNDVVGVAGFLLPGNRVDIINIFTTPSLKTDIVLSNVKILAIDQKASNDENKPVLV
EEEEEECEEEEHEEECCCCEEEEEEEEECCCCCEEEEEECEEEEEEECCCCCCCCCCEEE
RAVTLELSLEQAETLMIAKSRGSLQLALRNPNDTAVIELADIEEANKTEKTDKEVLSQTV
EEEEEEEEHHHHEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
KVAQFARVSEASTNKVLLLKGMSEQEIKIDNN
HHHHHHHHCCCCCCEEEEEECCCCCCEEECCC
>Mature Secondary Structure
MNNKTVLFVILSLVFGVTAVYLAQNWLKTNTKTEAVASTSNVMTMVTEVPLGTIIERKHL
CCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCHHEEEEECCCCHHHCCCCCE
ALTPVADNLIPEGAITDITEAEGFVVKHRLYQGEVLRKERITPKGEGSTLASLITPTMRA
EECCCHHHCCCCCCCCCCCCCCCEEEEEEHHCCHHHHHHCCCCCCCCCHHHHHHCCCEEE
VTIRVNDVVGVAGFLLPGNRVDIINIFTTPSLKTDIVLSNVKILAIDQKASNDENKPVLV
EEEEEECEEEEHEEECCCCEEEEEEEEECCCCCEEEEEECEEEEEEECCCCCCCCCCEEE
RAVTLELSLEQAETLMIAKSRGSLQLALRNPNDTAVIELADIEEANKTEKTDKEVLSQTV
EEEEEEEEHHHHEEEEEEECCCCEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHH
KVAQFARVSEASTNKVLLLKGMSEQEIKIDNN
HHHHHHHHCCCCCCEEEEEECCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA